Os06g0275500

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Revision as of 09:14, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0275500| Description = Similar to Polycomb protein EZ1 (Enhancer of zeste protein 1)| Version = NM_001063914.1 GI:115467559 GeneID:4340748| ...")
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Gene Name

Os06g0275500

Description

Similar to Polycomb protein EZ1 (Enhancer of zeste protein 1)

Version

NM_001063914.1 GI:115467559 GeneID:4340748

Length

8320 bp

Definition

Oryza sativa Japonica Group Os06g0275500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:9352714..9361033

Sequence Coding Region

9353007..9353028,9353129..9353232,9353341..9353660,9354451..9354612,9355335..9355419
,9355536..9355685,9355772..9355819,9355889..9355957,9356081..9356784
,9357610..9357745,9357820..9358040,9358539..9358670,9359500..9359590
,9360062..9360109,9360188..9360316,9360541..9360810

Expression

GEO Profiles:Os06g0275500

Genome Context

<gbrowseImage1> name=NC_008399:9352714..9361033 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:9352714..9361033 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctggcgattcccgaaatgagccgatgttttgcgaggaagggagcagtgaatcgggctatgttctatgtgttattgattcgctgaagaagaaaatcacatcggaccgctttgtttacatccagaaaagggtagaggagaatagcattaagcttagcccgattacactgcactctcacaatttgtcaaaaaataggcaaactagtacatccaacagtacagatttagtctcgaatttgctcacaaagaggaaagaagatgccctgtgtgctgtgaatagtcgtgagtcatctcctgatgaaagtgaaggtgccaattgccaagatgagtgttcatcgactgttattgtgggtggaaatctatccgcgaggaattctgtccgtccgattagactaccagaagtggcaacactccctccatatacaacttggatatttttggacaggaaccagcggatgcaagaagaccaatctgtacttggtcgtcgaaggatttactatgatacaaactgtggcgaagctttaatttgcagtgatagtgaagatgaagctgttgaggacgaggaagagaaaaaggagttcaaggattctgaagattgcataattcggatgaccattcaagaatgtggcatgtctgatgctgtgcttgaaactctagctcgagatatcgaaagggctcctgatgatataaaggccaggtatgagatcctacaaggggagaaacctgagggttcttccaagaaagtgtctgaacttaatgtcaaaatggaagacgtgtacggtgataaagatctggatgcagcattggattcctttgacaatctcttttgtcgccgatgtttggtttttgattgcaagctacatgggtgttctcaagatttagtatttccgactgaaaagcaggcaccattgtgcagctcggatgagggtacaccatgtggtattcactgttacaaactggtctctaaaccagatgctatcatggagattgattctcatttgcttgttgatgttgaggagccaacatcggacaatctaaaggatcagatagggtcaaataagaaaaagcttggttctagtgggcagaaaacaaaatctcaacaaagtgaaagttcttcaactgcaagggtttcctcagaaagcagtgagtctgaagtacaactgttaagcaataaatccccgcaacactctcctggcctctcaaaaaataagcttggcgcaaaaggtggaatcaagaaaagtactaacagaagaattgctgagagaattctaatgagtgtgaaaaaggggcaacaggaaatgtcaccggactctaattctattgttaatggatgccattggcctagggatatgaagcttagatctgatactaggagtggaattaaggattctgttgtatcctcacagtgtaattctccaagcacaaggagttttagaaagaagggcacacttcaaatggagaataactcatcttttgtggatgctcagagtgattcaatggaggatacaaataatgaacattcagcaacagatggttgtgatagttcaaggaaagaggaatgtgttgatgagagtatatgcaggcaagaagctcatggcaggtcctggaaagtgattgagcaagggcttctattgaaaggattagagatttttggaaagaacagttgtttaattgctcggaaccttctgggtgggatgaaaacatgcacagatgtttttcagtatatgaattacattgaaaacagcagtgcatctggagctcttagtggtgttgattctcttgttaaaggatatatgaagggtaatgaattacggacaagatcaagatttgtgagaaggcgaggaagggtccgccgtttgaagtacacctggaaaactgcaggctaccattttataaggaaaaggattacagaaaggaaggatcagccttgtcgacaatacactccttgtggttgccagtctgcatgtgggaagcaatgtccatgtctcacaaatggtacctgctgtgagaaatactgtgggtgcccgaaaatgtgcaagaatcgcttccgaggttgccattgcgcaaagagtcagtgtcgcagccggcagtgtccatgctttgctgctgacagggaatgtgatcctgatgtgtgtagaaactgctgggtagggtgcggtgatggtacattgggagtccctaaccaaagaggtgataattatgaatgccggaacatgaaactgctgcttaaacagcaacaaagggtcttacttgggagatctgatgtttctggctggggagctttcctcaagaatagtgttgggaagcacgagtatcttggcgagtacactggggagcttatctcccataaagaagctgacaagcgtggaaagatatatgaccgtgagaattcatcgttccttttcaacttgaacaatgagtacgttcttgatgcctacagaatgggcgacaagctgaagttcgccaaccattcccctgatccaaactgctacgccaaggtcatcatggtagcaggcgatcacagggtggggatcttcgccaaagagcggatcagcgcgggcgaggagctgttctacgactaccgctacgagcccgaccgggccccggcgtgggctcgcaagcccgaggggcccggtgccaaggacgacgcccagccttccaccgggagagcaaagaagctcgcccactga</cdnaseq>

Protein Sequence

<aaseq>MAGDSRNEPMFCEEGSSESGYVLCVIDSLKKKITSDRFVYIQKR VEENSIKLSPITLHSHNLSKNRQTSTSNSTDLVSNLLTKRKEDALCAVNSRESSPDES EGANCQDECSSTVIVGGNLSARNSVRPIRLPEVATLPPYTTWIFLDRNQRMQEDQSVL GRRRIYYDTNCGEALICSDSEDEAVEDEEEKKEFKDSEDCIIRMTIQECGMSDAVLET LARDIERAPDDIKARYEILQGEKPEGSSKKVSELNVKMEDVYGDKDLDAALDSFDNLF CRRCLVFDCKLHGCSQDLVFPTEKQAPLCSSDEGTPCGIHCYKLVSKPDAIMEIDSHL LVDVEEPTSDNLKDQIGSNKKKLGSSGQKTKSQQSESSSTARVSSESSESEVQLLSNK SPQHSPGLSKNKLGAKGGIKKSTNRRIAERILMSVKKGQQEMSPDSNSIVNGCHWPRD MKLRSDTRSGIKDSVVSSQCNSPSTRSFRKKGTLQMENNSSFVDAQSDSMEDTNNEHS ATDGCDSSRKEECVDESICRQEAHGRSWKVIEQGLLLKGLEIFGKNSCLIARNLLGGM KTCTDVFQYMNYIENSSASGALSGVDSLVKGYMKGNELRTRSRFVRRRGRVRRLKYTW KTAGYHFIRKRITERKDQPCRQYTPCGCQSACGKQCPCLTNGTCCEKYCGCPKMCKNR FRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVGCGDGTLGVPNQRGDNYECRNMK LLLKQQQRVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHKEADKRGKIYDRENS SFLFNLNNEYVLDAYRMGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERISAGEE LFYDYRYEPDRAPAWARKPEGPGAKDDAQPSTGRAKKLAH</aaseq>

Gene Sequence

<dnaseqindica>294..315#416..519#628..947#1738..1899#2622..2706#2823..2972#3059..3106#3176..3244#3368..4071#4897..5032#5107..5327#5826..5957#6787..6877#7349..7396#7475..7603#7828..8097#cttccctttcctccacccacgccgcgacgacgagtcgccgccgcggcctcgccggcgaccaggtctccggcggccccgccgcccgccgtgacggggctccggccttccgccctcctccccgcaccgcccgctatctcggctccccgactcctgcattcccccgactctcccccggccgccgccgccgccatttctgactctttctccgcggcgcgtctctcctccgagagcacgccgaccgcctcccgaagcggcgtcgcggccgcggcggccgccgccttctcccgcccctgatggctggcgattcccgaaatgaggcgggttctttctcctttgcctttttttactgctcggatgaaatttgaatctgtgtatgcttgtggttgtgatgaaatttagcttgttctgtccccgcagccgatgttttgcgaggaagggagcagtgaatcgggctatgttctatgtgttattgattcgctgaagaagaaaatcacatcggaccgctttgtttacatccaggtgatttgatttgatttgattgtttggagctgcaaatctcggtcattttcttgtattttctttatttaccagctgattagttttgttccccgtgatctttttttccagaaaagggtagaggagaatagcattaagcttagcccgattacactgcactctcacaatttgtcaaaaaataggcaaactagtacatccaacagtacagatttagtctcgaatttgctcacaaagaggaaagaagatgccctgtgtgctgtgaatagtcgtgagtcatctcctgatgaaagtgaaggtgccaattgccaagatgagtgttcatcgactgttattgtgggtggaaatctatccgcgaggaattctgtccgtccgattagactaccagaagtggcaacactccctccatatacaacttggatatttttggacaggtgcattttcttgacatccctaagatccctgcttaaattacatagttatcatggaaagttatagcgtatacactttattatccattagcaacaacatagcaatactatttcatttctcttgctaaacagtaaacacacgctcatttgtggtctttagttttttgtgcaacaatctattcagtcaaacatagtttttccgacctaatgctttatgtctctggtgattttttttctcttcatgtgtaaatgtgtaatggagatattgcctttcgttcttactataagcttgggaaatggtatagtataaaaatggaacaagtccttatgcggccccttgctacgtgccccacctctctcttaatcacatgcagttgcagacttgcaggctgggagtgtgtgttaaaacaagagcagcaaatgccacattgactgccttgaattcatcttcttggctttggtagcaaagctattgtgccagaaccattggctttgcctgctgcagtgtttcttttgcttttgctgtttcatccgctttatgcttcttagtgttctctttgctattgcgtgattttgtggagcagcaagcaaaaaatcagactgaaacatgtttttgatgaattgtttgttgatatgaatttaacagtatatctcatatgacaaacttctatttttctaaataagtaatgcaaaacatgcatggtcacagttacaatccagcatacttttagtttggagaggtagggcatcttaaggtttgttgaaatataagattttacaatctttcgtgcaggaaccagcggatgcaagaagaccaatctgtacttggtcgtcgaaggatttactatgatacaaactgtggcgaagctttaatttgcagtgatagtgaagatgaagctgttgaggacgaggaagagaaaaaggagttcaaggattctgaagattgcataattcggtaaatatgctttggacatgcatttgttttcttttgccttgaacattcactaaggatgctcaacttgtttgaccgttacaggctcatgggaccaagatacaggtgcagttaccatagcacctggagcttgggctcagtccatagaataacagatctgatgactctgtagtaatagtttcatggagaaatgctttcttctgtaagcattttgtcatattctctgtttttcttttgactgggaaaactaccaggactttgcctagtagtgtaatttcattaaagaataaaaaatagtaatattctctttttgaagtcacaatataacatagtacagaagcaatagagaaatgatattaaatatactggtcaagtaacatttggtatgaaatattcccaagagattatttagtaaaactacattattaaaaacttgtaagaaaaagggtttggttttggggcatatgtcttatatcattaaatgaaatggtcattaccagttttatctacattgttccaggggaaaaccttgagctggtcacactgcatatttgacctggttttgttttgtgcaacccttgcacaagcaagaaaagtatggttacagcattaatctgagttgtttgtggattaatttagaccttaaacatcatagatcacaataatttggtttctcctgtatggaattcttccacttaagggtgattttgtgcaatgattgccaggatgaccattcaagaatgtggcatgtctgatgctgtgcttgaaactctagctcgagatatcgaaagggctcctgatgatataaaggttcatacaacatttattcaatctcacgtcacatttgcatttgatccatttgggattttcctcttccaacttattgtttcatttctgaaaaattaaattacgtgtctattttccaggccaggtatgagatcctacaaggggagaaacctgagggttcttccaagaaagtgtctgaacttaatgtcaaaatggaagacgtgtacggtgataaagatctggatgcagcattggattcctttgacaatctcttttgtcgccgatgtttggtacgttttctgttaattgtcatgtgtgttttacataatatctctggtttactgatgaaacattctgctcattttgatgttggaaggtttttgattgcaagctacatgggtgttctcaagatttagtatttccggtaattttcaaaccaatgagttatttcctaaacttgtgtgttgttctaattagtgtccttttcgtatagactgaaaagcaggcaccattgtgcagctcggatgagggtacaccatgtggtattcactgttacaaactggtctgtattttataggcatatgactgtggaaaagcagctcttcttttatgatgatttagatatccgaaacataagcatatgccgttttgctgatctttacctcatttataatctttttgtcaggtctctaaaccagatgctatcatggagattgattctcatttgcttgttgatgttgaggagccaacatcggacaatctaaaggatcagatagggtcaaataagaaaaagcttggttctagtgggcagaaaacaaaatctcaacaaagtgaaagttcttcaactgcaagggtttcctcagaaagcagtgagtctgaagtacaactgttaagcaataaatccccgcaacactctcctggcctctcaaaaaataagcttggcgcaaaaggtggaatcaagaaaagtactaacagaagaattgctgagagaattctaatgagtgtgaaaaaggggcaacaggaaatgtcaccggactctaattctattgttaatggatgccattggcctagggatatgaagcttagatctgatactaggagtggaattaaggattctgttgtatcctcacagtgtaattctccaagcacaaggagttttagaaagaagggcacacttcaaatggagaataactcatcttttgtggatgctcagagtgattcaatggaggatacaaataatgaacattcagcaacagatggttgtgatagttcaaggaaagaggaatgtgttgatgagagtatatgcaggcaagaagctcatggcaggtcctggaaagtgattgagcaagggcttctattgaaaggattagagatttttggaaagaacaggttggtcccttgaaatgatcagcttcatatgaattatttcactaccttctacttcatcttaatatttgtatactattgcacaactaactgctgtatctgttcaggacagagtaaacgttaatgtgtctaatccctccgtcccaaaatataaggcgtgctttgacttttaattgtcaatttctcacaagtatactgtctatactctatagtggaaccaacatcatatgaaagtacattcaaatatgaatctgacaataccatttttatatcactaaacctatatattgtcagactagttgtgagtcaagatttgtaaaatttgaattttaaaatgcgtgcacaccttatattttggggtggagggattaacctttcagttcagcacaagaaactgactatgctttcttttaatatatctgtattactaaaagtattcaacacaaatgtctatatttaaagcaaatgctcttgcatcataattagacatccccgaaactatattcttatactactacatttcaagtaaaagctgtaacatgaagatacaatctacaatttgtcatgcataacgtattggaatgcggaattaactggaatttctaatgtttgcatcatttagtatctagttgtgttagttatagcgtttcatgtacaagaaattctgatgtatgttcatttcaaatgccttaaaaactcattcctgttttctttggatgtcttgcaagcatattggaaatgttctttatcctttctataatgagtagaataccttgttttccctaatttgaatagtcatactgagcccttgtttttcctatgttgaagttgtttaattgctcggaaccttctgggtgggatgaaaacatgcacagatgtttttcagtatatgaattacattgaaaacagcagtgcatctggagctcttagtggtgttgattctcttgttaaaggatatatgaaggtaggattcatcataaagctcatttacttgtattttcccaaggtttcatcttactttaatgcttgaactcccagggtaatgaattacggacaagatcaagatttgtgagaaggcgaggaagggtccgccgtttgaagtacacctggaaaactgcaggctaccattttataaggaaaaggattacagaaaggaaggatcagccttgtcgacaatacactccttgtggttgccagtctgcatgtgggaagcaatgtccatgtctcacaaatggtacctgctgtgagaaatactgtgggtgagctacttcaattattcatattgcagactccgagaacattttttcttctagatattaataatgttgcttatgaaaacaaaactgtgtagatgtatacaatttcaatattgtttggttagtgccgaccaattatgtcgtatgatcacatcttagttttgcaatcattgctgcttactgaaaaggaaaggaaaataaaacctaggaggaactaggcaccctttcaattaagaggaaaacaggcaccaaatttctagttgaagaggacttgaaccttgatggtgggagagtgagggtgtaaactccgcatttctcacccaaatggtgaatcaaacacatgcttctcttttgttctgtgtgctcttttggctattagctattacttattttgataatttataattttaattggaataaatgatgcaaacacatggagtgcaaatgtttgctgtccgcatcctgctgatgcaagttgaagtaatcctttctgcgttgcaggtgcccgaaaatgtgcaagaatcgcttccgaggttgccattgcgcaaagagtcagtgtcgcagccggcagtgtccatgctttgctgctgacagggaatgtgatcctgatgtgtgtagaaactgctgggtagggtatgtattttaaattctgatgaccctttgaatgattttgctagttaatgcacatttgtatatcttagagaaaggcaccaactataatgtgcttttcattctttgcacttctccaaccttacatctaccttgaaagttgagaaattaccacctatgcctgcacttgaaggatggaattttgatggatgatggatttatccttaagtgcaggaagaatcttgcatatgtatattccagtatctgaagatacggagttctgcagtaaaatatcttaatggtagaattgaatttaattaatataatcatatcaattgcttgcccaacagtcccaataggcaatagctacattccacaattaaaaaaatggtgcaataataataatttgacatttccttctcataccatttgctagcatacttgatagtgtgtgccagcacattgacaattgatattctatatctaaattatttataacaatatctgagttttataggagtgtttaccaggagttaatccatgaaaaatgtatcaatgatgggggagtttaatttgaatttgttatgaacgagcttctaatggtaggaaatgaaattttagatactgtaagttgttaggcaaacaccaaagatgagtatattatccggccagtgtgtaaatccaatcatgatcctttttcactccatggaaccttaaatatgctttctgttattcattgttgaaatagtctgttattcaatttcaattactgtttcttcatccctaatttttctagaacaaagcgccagtacattgaacttctatttttctacctgtactttctattgtgcaggtgcggtgatggtacattgggagtccctaaccaaagaggtgataattatgaatgccggaacatgaaactgctgcttaaacagcaacaaagggtaaaccttttgcactttgatttattcatgctattgcaccttggttataatttcgtcaagcctatcgattttttatgcctgcttggcccttccatttgcctttattcgatgctttgatatttttgtgtgaggaggcttgaggtctaagttaattacccagcagtacttctcaatagttttattctttttttttaatatttttcacgtgagttcaaattccagttgtctaaatacaaaagatcttaagtttaataccaaagaaactagttagagtaactatattccaaaacaggcaatgaactatgaaccaaaaaacttcccattagcaggaaaataattgcataaagtatctatcgattatgttggtgaatttatgaaacaccagggggtgttacttcattttctattacaggtcctattccatctctaaatatctgtaaatagtattgacttgctatgtgcactcttcaggtcttacttgggagatctgatgtttctggctggggagctttcctcaaggtaagatttctctattgacccttttcctccctcataggacgtaccctcatctaactagtccttttcctaaatcttcagaatagtgttgggaagcacgagtatcttggcgagtacactggggagcttatctcccataaagaagctgacaagcgtggaaagatatatgaccgtgagaattcatcgttccttttcaacttgaacaatgaggtgagtgcaaagacaccccgcaaattacggtctgcaagcattcaggattgcatactgtactgatttgactagcctaatgtcatccttttgcgtgaaccgagttgtttacatccccaacccactgttgttcaatatcgcgcgatttatgatccgctgcagtgttttcgctgttttcgccagtaccggatgctcactcactcactttaccctctcgatgaatgcagtacgttcttgatgcctacagaatgggcgacaagctgaagttcgccaaccattcccctgatccaaactgctacgccaaggtcatcatggtagcaggcgatcacagggtggggatcttcgccaaagagcggatcagcgcgggcgaggagctgttctacgactaccgctacgagcccgaccgggccccggcgtgggctcgcaagcccgaggggcccggtgccaaggacgacgcccagccttccaccgggagagcaaagaagctcgcccactgaagaagaagaagaagaagaagatcagccgttgattcttttgttgtcttggttgattctttcgttattggtgagggggaccgagaactctgacggtgattagcgccgtaaggaaaactttcctgccattcgttggccccctcgattcgattcgttgattttccctgaattctgtaactgctgcacctgtcgccagttcaacttcaaaagatttttctgattctgg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0275500, RefSeq:Os06g0275500