Os06g0292100

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Revision as of 09:15, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0292100| Description = Similar to Embryogenesis transmembrane protein| Version = NM_001063957.2 GI:297605630 GeneID:4340793| Length = 4072 ...")
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Gene Name

Os06g0292100

Description

Similar to Embryogenesis transmembrane protein

Version

NM_001063957.2 GI:297605630 GeneID:4340793

Length

4072 bp

Definition

Oryza sativa Japonica Group Os06g0292100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:10793418..10797489

Sequence Coding Region

10793418..10793514,10794856..10794899,10794970..10797489

Expression

GEO Profiles:Os06g0292100

Genome Context

<gbrowseImage1> name=NC_008399:10793418..10797489 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:10793418..10797489 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaaatggcacgagccaagacgataacattgagggtaattttaagctattgtggagtttacggaagtatttgatactgcttggaaccatagcagtcggtgtgacatacaatgctggattaacaccaccagggggattttggacactaaataaggataagcaccaggctggtaatcctgttcttcctgttggttactttcaacggtatgaggtattcttttactgcaatgcaacggcctttgctgcatctcttgtcttaatcatcttgcttctaagtaagagtgcaaccaagcatgtgttgtggctccggtcaatgcaatttaccatgatactggacctattcagcctgatgggggcttatgctgcaggaagctgcagggcacttaagtcatccatttatacctggattctagtttttgctgttttcttgtatgttggggtacatgtcctagtattcatgagggttattccagataagttgaaagagatgatacagaaattatggggtgtccacgacaggcaaagtgacagacatcaagacaaagatgttgaggatgctcgcaagttcatcttgattcttgtaacatttactgctactgtcacataccaagcaggtttgagtccaccaggtggcttttgggctgaaaatgagtatgatccgcttagtaaggtgcctccagcctttcctccttacaagcaccagccagctacttctgttcttcgcagtaactatcttgaccgttataaattatttgttagttgtaattcaacttcttttgtagcttctttggtcacagtcatattgcttctgagcacagaattgagcaaacatgggataaggtccaaagcagtcattgtatgtgttgtagctgatctattgtgcctagttggtgcctatgctgcaggatgttgtagggatgtagcaacatcattctacgtaatgtttattatcatgatagttttaatctgccttgcactgttggttgggatctttgcatacaaacctgttgcaatctggctacagaatttcaaaaaagtgagtctgcggtgtgtgagtgcaacgggttggatgctctcatcgagctccaggagaaacggattcagtaatggagatcataaccatgacactgagattgttggcaccaatgatgatactgaacctgttgctaatggccatattcacagcaaccaagcagcaccaattcaaaatgttaatggcaatcaaattgaggagcacttgaataagacccgcaaaaatctgctgcttcttgccattcttgcagtatccctaacatatcaatcaggtctgaatccaccaggtggcttctggtcaggaaatgaattccgtcatgcagacggtgatcacatccttgaagaataccatcattcagctggtgatcgcattcttgaggacacataccattcccgctttattgcattcttttatctcaacgcagtggcctttgtggcatctgttgttatgatcattttgctcttgaacaaggtgatgatcatgaaggttacaaaacagtgtacattgcagatagtcatgattgtgaatctcctttccctgactggagcatttgttatggggagctgcagggaagcaaataagtccatttatatatcagtgttactctgtctggtacttgcctacgttcttgttcatgttctaatagcaatacatgttctatgtggaatggcatcgccggcatcatctgtgtcaccgcagaaccgaacagaggatactaaggagttggggaggaggcgtaatctactattgacactttcagttctagctgcaactgtcacataccaagctggcatgaatcctccaggaggtgtatggtctgatgacaaggatgtcagtggcaagccaggcaatccgatcctccaggacacccacccaaaacgctatgatgtgttctattactcaaattcactatcctttgtgtcttctgtagttaccacaatactacttgtgaacaaggaatcctgtgagcatgggataaaatcacatgcattgcgagtgtgtttggtggtgggcttggttggcctcttaatcgcctatgctgctggaagttgcaggaaagcaatacagtctatttatctgatcatcattgctgttgcagttttgatctccgttgtgattcaagtctttctactctcttcaacaaatagtaatacactgcagacgtttttgtcaatacgggatgtcaatcaagacagttcttctgggccgcaagaaagtacagatcctcaagagaaaaaagagaggaaaaggaaaaagtatctgatgctgcttgcagttttagcagcttccatagcataccaagctggtctgaatccacctggtggcttttggccggatgacggtggccacaaggctggcaatccaattcttcatgatgtgaatcataggcgctacaaaacattcttctgcttcaacgcattctccttcatgtcatcaattgttgtgatcatgcttctgctgagtagaactatcagagagaaggatgaagctgcagaagattcaggacatcagtctatgtctatgggctattggagcccggggaatcaccatctctctctcgcttcacctgttgttgttgttgtgttgtgttcttccccctctcctcttggaagagtgggggtttaa</cdnaseq>

Protein Sequence

<aaseq>MANGTSQDDNIEGNFKLLWSLRKYLILLGTIAVGVTYNAGLTPP GGFWTLNKDKHQAGNPVLPVGYFQRYEVFFYCNATAFAASLVLIILLLSKSATKHVLW LRSMQFTMILDLFSLMGAYAAGSCRALKSSIYTWILVFAVFLYVGVHVLVFMRVIPDK LKEMIQKLWGVHDRQSDRHQDKDVEDARKFILILVTFTATVTYQAGLSPPGGFWAENE YDPLSKVPPAFPPYKHQPATSVLRSNYLDRYKLFVSCNSTSFVASLVTVILLLSTELS KHGIRSKAVIVCVVADLLCLVGAYAAGCCRDVATSFYVMFIIMIVLICLALLVGIFAY KPVAIWLQNFKKVSLRCVSATGWMLSSSSRRNGFSNGDHNHDTEIVGTNDDTEPVANG HIHSNQAAPIQNVNGNQIEEHLNKTRKNLLLLAILAVSLTYQSGLNPPGGFWSGNEFR HADGDHILEEYHHSAGDRILEDTYHSRFIAFFYLNAVAFVASVVMIILLLNKVMIMKV TKQCTLQIVMIVNLLSLTGAFVMGSCREANKSIYISVLLCLVLAYVLVHVLIAIHVLC GMASPASSVSPQNRTEDTKELGRRRNLLLTLSVLAATVTYQAGMNPPGGVWSDDKDVS GKPGNPILQDTHPKRYDVFYYSNSLSFVSSVVTTILLVNKESCEHGIKSHALRVCLVV GLVGLLIAYAAGSCRKAIQSIYLIIIAVAVLISVVIQVFLLSSTNSNTLQTFLSIRDV NQDSSSGPQESTDPQEKKERKRKKYLMLLAVLAASIAYQAGLNPPGGFWPDDGGHKAG NPILHDVNHRRYKTFFCFNAFSFMSSIVVIMLLLSRTIREKDEAAEDSGHQSMSMGYW SPGNHHLSLASPVVVVVLCSSPSPLGRVGV</aaseq>

Gene Sequence

<dnaseqindica>3976..4072#2591..2634#1..2520#atggcaaatggcacgagccaagacgataacattgagggtaattttaagctattgtggagtttacggaagtatttgatactgcttggaaccatagcagtcggtgtgacatacaatgctggattaacaccaccagggggattttggacactaaataaggataagcaccaggctggtaatcctgttcttcctgttggttactttcaacggtatgaggtattcttttactgcaatgcaacggcctttgctgcatctcttgtcttaatcatcttgcttctaagtaagagtgcaaccaagcatgtgttgtggctccggtcaatgcaatttaccatgatactggacctattcagcctgatgggggcttatgctgcaggaagctgcagggcacttaagtcatccatttatacctggattctagtttttgctgttttcttgtatgttggggtacatgtcctagtattcatgagggttattccagataagttgaaagagatgatacagaaattatggggtgtccacgacaggcaaagtgacagacatcaagacaaagatgttgaggatgctcgcaagttcatcttgattcttgtaacatttactgctactgtcacataccaagcaggtttgagtccaccaggtggcttttgggctgaaaatgagtatgatccgcttagtaaggtgcctccagcctttcctccttacaagcaccagccagctacttctgttcttcgcagtaactatcttgaccgttataaattatttgttagttgtaattcaacttcttttgtagcttctttggtcacagtcatattgcttctgagcacagaattgagcaaacatgggataaggtccaaagcagtcattgtatgtgttgtagctgatctattgtgcctagttggtgcctatgctgcaggatgttgtagggatgtagcaacatcattctacgtaatgtttattatcatgatagttttaatctgccttgcactgttggttgggatctttgcatacaaacctgttgcaatctggctacagaatttcaaaaaagtgagtctgcggtgtgtgagtgcaacgggttggatgctctcatcgagctccaggagaaacggattcagtaatggagatcataaccatgacactgagattgttggcaccaatgatgatactgaacctgttgctaatggccatattcacagcaaccaagcagcaccaattcaaaatgttaatggcaatcaaattgaggagcacttgaataagacccgcaaaaatctgctgcttcttgccattcttgcagtatccctaacatatcaatcaggtctgaatccaccaggtggcttctggtcaggaaatgaattccgtcatgcagacggtgatcacatccttgaagaataccatcattcagctggtgatcgcattcttgaggacacataccattcccgctttattgcattcttttatctcaacgcagtggcctttgtggcatctgttgttatgatcattttgctcttgaacaaggtgatgatcatgaaggttacaaaacagtgtacattgcagatagtcatgattgtgaatctcctttccctgactggagcatttgttatggggagctgcagggaagcaaataagtccatttatatatcagtgttactctgtctggtacttgcctacgttcttgttcatgttctaatagcaatacatgttctatgtggaatggcatcgccggcatcatctgtgtcaccgcagaaccgaacagaggatactaaggagttggggaggaggcgtaatctactattgacactttcagttctagctgcaactgtcacataccaagctggcatgaatcctccaggaggtgtatggtctgatgacaaggatgtcagtggcaagccaggcaatccgatcctccaggacacccacccaaaacgctatgatgtgttctattactcaaattcactatcctttgtgtcttctgtagttaccacaatactacttgtgaacaaggaatcctgtgagcatgggataaaatcacatgcattgcgagtgtgtttggtggtgggcttggttggcctcttaatcgcctatgctgctggaagttgcaggaaagcaatacagtctatttatctgatcatcattgctgttgcagttttgatctccgttgtgattcaagtctttctactctcttcaacaaatagtaatacactgcagacgtttttgtcaatacgggatgtcaatcaagacagttcttctgggccgcaagaaagtacagatcctcaagagaaaaaagagaggaaaaggaaaaagtatctgatgctgcttgcagttttagcagcttccatagcataccaagctggtctgaatccacctggtggcttttggccggatgacggtggccacaaggctggcaatccaattcttcatgatgtgaatcataggcgctacaaaacattcttctgcttcaacgcattctccttcatgtcatcaattgttgtgatcatgcttctgctgagtagaactatcagagagaaggatgtacatattgatgtattgtacttgatcatgatacttgatttactgggtctcatgacagcttttgctgcaggaagctgcagaagattcaggacatcagtctatgtctatgggctagtaatctgtgttgtggtataccttttgcttgtgaccgttttatcaagtggaattgcaaaatatctgagatcgaggaaggttcaaattccttctcaggaccatcctgaaaatgcttcaagagcagacacacccaatgcctgaacatcaagtttgaaggtttttgtgttcacagaacaacaatgagttgaaaatcaccttttgttttttcttcagatagtgggcattttcagttcttagcatttgttctttcatgttcagtttaacttgaaatctttttctctttcagcttatgggggaagccttcgccccaactcaacagctttttgttgttgtaaacaaaatctttgtactgttcttttttccccaatcttaatggaatttggtcgccagttccttcggccgacccggcaaaaaagtatcagcggatgctatttgacatatttgatcagggttgaaaattttagaatgaagcctgaagctgcacatcaccacatgtatggcttgcttaaatctcttgcatttcttctcaattgagctacaagtatctggtactctgtggttcgatcttgcagaaagttgtataattgtgccatagaagtttggtatggttatcagactgatctttcagcaagtatctgtaatgtaagaagtgtttattatgattttctgttatccgtcctttgttttactacagctaaactgcttaaaatgttggtagtctcaggttttgcgattattataactctgaaagttagctctttctttttattctgctttctcttgaatttttctgttatgatgaagtaccaaccacacatgggtgagatattaatgttatggaattagttatttgattggcttacatatgcgtgctttatggatattttggtgcttgtgactatatagtacatcagtatcaccaagacagcaattttgatttatccctgttgctttgtgcaaaaaatattgcctatataaacatttggtaaacgatagcctactagtgtattgtgtgttttgcagaattaatatatcgagtcttgtgtggagatttttatgtattgtgtgctttccagttgaaagctcttttagtttgttagtaatcctttcggatagcatcatttcgaacacaggagttctattggatttttatcagaattagtttaattacttaaatgggaaattgagaatgttgttgggttgaaacagctttttaccgttcagatcttgtgtttttctttaagcaaaatgtagggctagtttttcaggtacaactgaatataatcgataaatttctttcaaaaaaataaattattaaatgtattttttaaccttgtgcagttggagcccggggaatcaccatctctctctcgcttcacctgttgttgttgttgtgttgtgttcttccccctctcctcttggaagagtgggggtttaa</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0292100, RefSeq:Os06g0292100