Os06g0294200

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Revision as of 09:15, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0294200| Description = Conserved hypothetical protein| Version = NM_001063963.1 GI:115467657 GeneID:4340799| Length = 3096 bp| Definition ...")
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Gene Name

Os06g0294200

Description

Conserved hypothetical protein

Version

NM_001063963.1 GI:115467657 GeneID:4340799

Length

3096 bp

Definition

Oryza sativa Japonica Group Os06g0294200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:10881017..10884112

Sequence Coding Region

10881249..10882755,10882956..10883983

Expression

GEO Profiles:Os06g0294200

Genome Context

<gbrowseImage1> name=NC_008399:10881017..10884112 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:10881017..10884112 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcaaggggacgacgctaccgagcagcagccatattgggagtacacgctgcggaagtacctcctgctgctggcctcgctggtggccacggtggcgtacggcgccgggttcagcccgccgggcggcgcgtggcaggtcaccgccggcgggcacaccgccggcgaccccatcatccgggacctctactacggccggtacctcgtcttcttctactgcaacgccaccgcgttcgcgtcgtctctgctcgtcatcgtcctcatcctcctcttcgccgtgctccacgagaagcggaacatgtgggtcaccgtcatgccgctccgggtggtcatggtgctcgacctgctcagcctcatgggcgcctacaccgcggggacgtgccgggacgccaccaccaccaggtacaccgccgtgctcgtcgccgccgtgttcgtctacctcgtcgtgcagatggtgctcgcctcgctcgccggcggcgacgacgaggacgagcacgtcgtcaccaaggagcggtcgcgcaaggtgctcctgctgctcgccacgttcgccacgagcctcacgtacgtggccgggctgagcacgccgggagggttctgggcggacggcgtcgccggccaccgcgccggcgaggcggtcatgggggagcggcacccggcgcggctgacggcgttcctcctctgcaacaccaccgcgttcgtcgcgtcgctgctcatcatcgtgctgctcctcgaccggaagctgcgcgacggcacggtgcggtcctgggagctgtacgggtgcatcgtcgtcgcgctggtcgggctcgtcggagcgtacgccgccggcagctcgagggcggagcacaccaccgtgtacgtgctggcgctcgtcggcgccgtgctcgtgtacatcgccttccacctcaccgtcgtgccgtgcgtcaagcaggcgcttggcaacacgaagctcgcacggatctactcttcgatatcaaaacgacgatattgtcccaagcaagaccaagaagtagatcaggccactattgacagggaggcggaacataaccgagctatggagaaggctcgctctctcgttctactgctcgccactctagcagcgaccgtcactttccaagctgcgctagatccgccgggtgggtattggcaggatgacaatggcgaccacaaggccggtaacccgattctcctaacaactaaccctagaaggtacaaggcattcttctactgcaactcgaccgccttcgtgtcatccttacttgccatcatcctagtgcagagcaggtctctgctcaagcgccacgcgctagaggcagccatgattctggatttgtttgggctcatgggtgcatatgcagcgggaagctgtcgggatgcgagtacctccatttatgttatggccatagccggtgccgtgctggtgtatgttgtgatccatgtcgtgttcttcacactagaccagagaggacacgacgaagatgtattgctggagaagaggcgcaagaggttgctccttttcgccatcttgtccgcaaccatcacctaccaagccgggctaaccccaccaagtggcttctggcaagatgatagtgatggtcaccgtgcaggcgagccagtcctcttcagcaacaacccttaccgttttaaagcctttttctactgcaacaccaccagctttatgtcatctatcgccctcatcatccttctcgtgaacccaaatttgtacaggccagccattcagagctatgcgctctccgtttgcatggtggctggcatgtttggtctcatgggtgcctacgccgctgggagctcacagcatatgcgtacatccatctttgtcttcgcattggtgcttatttttgtggccatacttcttgtggtattcgtggtgcgccagaaccatggcaacactaccaccagacagaactcccagggtgaccaaaaccagagaggtgacaacagtggaagcgaaaatcacaccaagcgcaagtacctgatgctactggggatcctggcagcgagcgtcacctaccaggccggcctgcacccgccgggcggcgtgtggcagagcgacgacgacggcgcaggccacgcggccggcaacccggtcctccgcgacaaccggaggcggcggtaccgcgccttcttctacagcaactccacttccttcatggcgtccgtcgtcgtcatcgtcctgctgctgccggagtcggcatcaccgcatgtcaacgagtggttgctgaaggcgatgaacacgacgattgttctcgacatgattggcctcctggtggcctatggggcagggtccagcagggaatgggagacatctggatatgtcatcgccatggccgtcgtcgtgctgggctacattgcagtgcacggggtgttgtcgaccttcggccagggtcacaaggcaggtggtaataatccgcagattacacctgagctggatgccgagtcccaagaaccaggaaatggcaggcgaacggcggcacagggaagctatatgcattatccatcccagaatgtgatgcagtga</cdnaseq>

Protein Sequence

<aaseq>MAQGDDATEQQPYWEYTLRKYLLLLASLVATVAYGAGFSPPGGA WQVTAGGHTAGDPIIRDLYYGRYLVFFYCNATAFASSLLVIVLILLFAVLHEKRNMWV TVMPLRVVMVLDLLSLMGAYTAGTCRDATTTRYTAVLVAAVFVYLVVQMVLASLAGGD DEDEHVVTKERSRKVLLLLATFATSLTYVAGLSTPGGFWADGVAGHRAGEAVMGERHP ARLTAFLLCNTTAFVASLLIIVLLLDRKLRDGTVRSWELYGCIVVALVGLVGAYAAGS SRAEHTTVYVLALVGAVLVYIAFHLTVVPCVKQALGNTKLARIYSSISKRRYCPKQDQ EVDQATIDREAEHNRAMEKARSLVLLLATLAATVTFQAALDPPGGYWQDDNGDHKAGN PILLTTNPRRYKAFFYCNSTAFVSSLLAIILVQSRSLLKRHALEAAMILDLFGLMGAY AAGSCRDASTSIYVMAIAGAVLVYVVIHVVFFTLDQRGHDEDVLLEKRRKRLLLFAIL SATITYQAGLTPPSGFWQDDSDGHRAGEPVLFSNNPYRFKAFFYCNTTSFMSSIALII LLVNPNLYRPAIQSYALSVCMVAGMFGLMGAYAAGSSQHMRTSIFVFALVLIFVAILL VVFVVRQNHGNTTTRQNSQGDQNQRGDNSGSENHTKRKYLMLLGILAASVTYQAGLHP PGGVWQSDDDGAGHAAGNPVLRDNRRRRYRAFFYSNSTSFMASVVVIVLLLPESASPH VNEWLLKAMNTTIVLDMIGLLVAYGAGSSREWETSGYVIAMAVVVLGYIAVHGVLSTF GQGHKAGGNNPQITPELDAESQEPGNGRRTAAQGSYMHYPSQNVMQ</aaseq>

Gene Sequence

<dnaseqindica>1358..2864#130..1157#gtgactgagtcaagtctggcgaggcagtgataaactattctcaactccaagctgaagctgaaactagaaatttaaccatatataccgatcgatcttagcttgcatctggagctcactgaggttttggcaatggcgcaaggggacgacgctaccgagcagcagccatattgggagtacacgctgcggaagtacctcctgctgctggcctcgctggtggccacggtggcgtacggcgccgggttcagcccgccgggcggcgcgtggcaggtcaccgccggcgggcacaccgccggcgaccccatcatccgggacctctactacggccggtacctcgtcttcttctactgcaacgccaccgcgttcgcgtcgtctctgctcgtcatcgtcctcatcctcctcttcgccgtgctccacgagaagcggaacatgtgggtcaccgtcatgccgctccgggtggtcatggtgctcgacctgctcagcctcatgggcgcctacaccgcggggacgtgccgggacgccaccaccaccaggtacaccgccgtgctcgtcgccgccgtgttcgtctacctcgtcgtgcagatggtgctcgcctcgctcgccggcggcgacgacgaggacgagcacgtcgtcaccaaggagcggtcgcgcaaggtgctcctgctgctcgccacgttcgccacgagcctcacgtacgtggccgggctgagcacgccgggagggttctgggcggacggcgtcgccggccaccgcgccggcgaggcggtcatgggggagcggcacccggcgcggctgacggcgttcctcctctgcaacaccaccgcgttcgtcgcgtcgctgctcatcatcgtgctgctcctcgaccggaagctgcgcgacggcacggtgcggtcctgggagctgtacgggtgcatcgtcgtcgcgctggtcgggctcgtcggagcgtacgccgccggcagctcgagggcggagcacaccaccgtgtacgtgctggcgctcgtcggcgccgtgctcgtgtacatcgccttccacctcaccgtcgtgccgtgcgtcaagcaggcgcttggcaacacgaagctcgcacggatctactcttcgatatcaaaacgacgatattgtcccaagcaagaccaagaagtagatcaggccactattgacaggtttgtaaagcactcctatttgttttttttcttttacaaacaaaagaatttacatgtcccctctctcattgtgcagcaaatttgattagagaggcaaagagagtttgatagtttttgagaataatcacatttgtttcactctctaactatttgttgaaagagaataatcaatttttttctactcttgctgcaattattagggaggcggaacataaccgagctatggagaaggctcgctctctcgttctactgctcgccactctagcagcgaccgtcactttccaagctgcgctagatccgccgggtgggtattggcaggatgacaatggcgaccacaaggccggtaacccgattctcctaacaactaaccctagaaggtacaaggcattcttctactgcaactcgaccgccttcgtgtcatccttacttgccatcatcctagtgcagagcaggtctctgctcaagcgccacgcgctagaggcagccatgattctggatttgtttgggctcatgggtgcatatgcagcgggaagctgtcgggatgcgagtacctccatttatgttatggccatagccggtgccgtgctggtgtatgttgtgatccatgtcgtgttcttcacactagaccagagaggacacgacgaagatgtattgctggagaagaggcgcaagaggttgctccttttcgccatcttgtccgcaaccatcacctaccaagccgggctaaccccaccaagtggcttctggcaagatgatagtgatggtcaccgtgcaggcgagccagtcctcttcagcaacaacccttaccgttttaaagcctttttctactgcaacaccaccagctttatgtcatctatcgccctcatcatccttctcgtgaacccaaatttgtacaggccagccattcagagctatgcgctctccgtttgcatggtggctggcatgtttggtctcatgggtgcctacgccgctgggagctcacagcatatgcgtacatccatctttgtcttcgcattggtgcttatttttgtggccatacttcttgtggtattcgtggtgcgccagaaccatggcaacactaccaccagacagaactcccagggtgaccaaaaccagagaggtgacaacagtggaagcgaaaatcacaccaagcgcaagtacctgatgctactggggatcctggcagcgagcgtcacctaccaggccggcctgcacccgccgggcggcgtgtggcagagcgacgacgacggcgcaggccacgcggccggcaacccggtcctccgcgacaaccggaggcggcggtaccgcgccttcttctacagcaactccacttccttcatggcgtccgtcgtcgtcatcgtcctgctgctgccggagtcggcatcaccgcatgtcaacgagtggttgctgaaggcgatgaacacgacgattgttctcgacatgattggcctcctggtggcctatggggcagggtccagcagggaatgggagacatctggatatgtcatcgccatggccgtcgtcgtgctgggctacattgcagtgcacggggtgttgtcgaccttcggccagggtcacaaggcaggtggtaataatccgcagattacacctgagctggatgccgagtcccaagaaccaggaaatggcaggcgaacggcggcacagggaagctatatgcattatccatcccagaatgtgatgcagtgatgagatgcgttttcagcctgattgaattccacaagctaatcaactgaaatatctagcgggcaagaacattatgtactgcaattcttctccatatctttcttattttctaggcttcttctctcagtttttttttttccattttttcccaagtctctcctgttgtaagtggattatcctgaataaatccagtcacctaagggcatgaaaagtgcttttgagggttgtgatctgt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0294200, RefSeq:Os06g0294200