Os06g0295000

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Revision as of 09:15, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0295000| Description = Conserved hypothetical protein| Version = NM_001063965.2 GI:297605638 GeneID:4340801| Length = 3335 bp| Definition ...")
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Gene Name

Os06g0295000

Description

Conserved hypothetical protein

Version

NM_001063965.2 GI:297605638 GeneID:4340801

Length

3335 bp

Definition

Oryza sativa Japonica Group Os06g0295000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:10939811..10943145

Sequence Coding Region

10939985..10941565

Expression

GEO Profiles:Os06g0295000

Genome Context

<gbrowseImage1> name=NC_008399:10939811..10943145 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:10939811..10943145 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>aaaagcttactcacacatttaattttatgttttgttattagacaatcatccatttacttttctttggtttcaattactagggagaagctactgaaccaagctctagagaaggctcgctctcttgttctattgctcgccactctggcagcaaccataacttaccaagcagtgcttgacccgccgggtggttattggcaggttgacaaggatggccacaaggctggtgacccaattctcctaacaattaatgctaagcggtataagacatttttctatttcaactcaactgccttcgtggcatccttactcgccatcatcctggtgcagagcaagtctctgcttaagcgccatgcactggaggcagccatgattttagacttatttgggctcatgggtgcatatgcagctggtagctgccgggatgcaagcacctccataaatgtcatggccatagctggtgcagtgctggtgtatgtggtgatccatatcgtgttcttcacactagatcacaatgatggcagtatgctaggtgaagacaatgcactgctggaaaagaggcgcaagaggttgctcctttttgcgatcttatgtgcaaccatcacctatcaagctgggctaaccccgccaagcggctgctggcaagatgatgataaacaacatggttatcatgcaggtcacccagtcctctttagcaaccacccacgccgttacaaagccttcttctactgcaacacaacaagcttcatgtcatccatcgcccttatcatactcttggtcaatccaaatttgtataggccagccattcatagctatgcgctctctgtttgcatggtggctggcatgtttggtctcatgggtgcctatgctgccggaagctcacaacatatgcggacatccatatatatcttcgttttgctattcatttttctggtcttacttcttgtagcattcgtggtgcaccagaaatctcagggcacgcagaacaggagaacaaatgaagcggaagtacctaatacgaatgacatcaagcgtaaacagtacaccaagcgcaagaacttgatgctactggggattctagcagcgagtgtcacctaccaggccggcttgcacccaccgggtggcgtgtggcagagcaatgatgatgctgggcatgctgcgggtgacccagtcttgcatgacaagcaaaagctacggtatcacgccttcttctacagtaactccatttccttcatggcgtctatcattgttatcatcttgttgttgccagagtcgctaaaactgaatgtcaatgagtggttgttgaaggcaatgaacacgacagttgttctcgacatgattggactcctggtagcctatggtactggctctagtagggattgggacacatctggatatgtcatcgcgatggcaatatttgttctaggctacatttcaatccatgctatgctatcgaagttgagccaggttgccaaccatcgtgttgcttctgaggatcctgagtctcaagtacttggtaatggtttgcatcaggcgcgtggggtctgtgtgggactccatccatccatcaatgttgttcagtga</cdnaseq>

Protein Sequence

<aaseq>KSLLTHLILCFVIRQSSIYFSLVSITREKLLNQALEKARSLVLL LATLAATITYQAVLDPPGGYWQVDKDGHKAGDPILLTINAKRYKTFFYFNSTAFVASL LAIILVQSKSLLKRHALEAAMILDLFGLMGAYAAGSCRDASTSINVMAIAGAVLVYVV IHIVFFTLDHNDGSMLGEDNALLEKRRKRLLLFAILCATITYQAGLTPPSGCWQDDDK QHGYHAGHPVLFSNHPRRYKAFFYCNTTSFMSSIALIILLVNPNLYRPAIHSYALSVC MVAGMFGLMGAYAAGSSQHMRTSIYIFVLLFIFLVLLLVAFVVHQKSQGTQNRRTNEA EVPNTNDIKRKQYTKRKNLMLLGILAASVTYQAGLHPPGGVWQSNDDAGHAAGDPVLH DKQKLRYHAFFYSNSISFMASIIVIILLLPESLKLNVNEWLLKAMNTTVVLDMIGLLV AYGTGSSRDWDTSGYVIAMAIFVLGYISIHAMLSKLSQVANHRVASEDPESQVLGNGL HQARGVCVGLHPSINVVQ</aaseq>

Gene Sequence

<dnaseqindica>1581..3161#aaagtgtacaagtgtacaagccatatcaatctttcctcttgagttcactaagatttcgccaatgccgccgccgccgccgccgccgccgcccgggaatgttgcggaggagcagccatgggagtacacgctgcggaagtacctcctgctgctggccacgctggtggcgacggtggcgtacggcgccgggttcagcccgccgggcggcgtgtggtcggacgcgaaggacggcgtccacctcgccggcgaccccgtcatcagggaccactacaacggccgctacctcctctacttctactgcaacgccaccgcgttcgtgtcgtcgctcgtcgtcatcgtcctcatcctcctcttcgccgtgctccacgagaagcggaacgtgcgggtcaccgtgatgccgctgcgcgcggtcatggtgctcgacctcgtcagcctcatgggcgcctacgccgcggggacgtgccgggacaggaccaccaccacgttcaccgtcgtgctcgtctccctcgtcgtcgtctacgtcgcgctgcaggtggtgctcgcctcgctgcccgccggcgagcacgacggcgacgagcacgtcgtgaaggagaagtcgcgcaaggtgctcctgctgctcgccacgttcgccacgagcctcacgtacgtcgccggcctgagcacgccgggaggcttctggtcggactcggacgccgccgccggccaccgcgccggcgacgcggtcatgggcgacaggcacccggcgaggctgacggtgttcctcctctgcaacaccaccgcgttcgtcgcgtcgctgctcgtcatcgtgctgctcctcgaccggaagctgcgcgacggcacggtgcgcgcctgggagctgtacgggtgcgtcctcgtctcgctggcggggctcgtcggagcctacgccgccgggagctccagggcggcgcacaccaccgcctacgtagtagctctgatcggcgctgtcctcgcctacattgccatccatctggccgtcgtcgcgtgcgccgcgcgcgcacttagcaacaccggcatgtcggagaagcttgctgggatgtattcttcggtgaaagaacggcgatatcatctcaggcaaccggcccgagaattagcccaggctaatgatgacaggtatatgtcgtcgtctcacgagaatatttcattttacagatcttagagtttgataattctctttaagtctcagtgtgaaacaaaattatttagtgtttatttgatctactgttcttgaaaaagtacgtacgatcatttttaatgttaatccatgatgacctttcctaatacctccctccttagtgctaccgtatcaatagtgttggatggtaaatctatattgacatacgtaatacactggtacctacatgtattgtgtatggtattaggtattttgtaccgtataacattagtaccaggttatatcaagtctgatatcatagctatcaggtctattacatactgtatcatactgacgtcaacgtataatattccgttaaaggaatggtatagtgtttcctaggcatactcgtaaacgacggtacctttccctaccttcccaaaacatgtaaaaaagcttactcacacatttaattttatgttttgttattagacaatcatccatttacttttctttggtttcaattactagggagaagctactgaaccaagctctagagaaggctcgctctcttgttctattgctcgccactctggcagcaaccataacttaccaagcagtgcttgacccgccgggtggttattggcaggttgacaaggatggccacaaggctggtgacccaattctcctaacaattaatgctaagcggtataagacatttttctatttcaactcaactgccttcgtggcatccttactcgccatcatcctggtgcagagcaagtctctgcttaagcgccatgcactggaggcagccatgattttagacttatttgggctcatgggtgcatatgcagctggtagctgccgggatgcaagcacctccataaatgtcatggccatagctggtgcagtgctggtgtatgtggtgatccatatcgtgttcttcacactagatcacaatgatggcagtatgctaggtgaagacaatgcactgctggaaaagaggcgcaagaggttgctcctttttgcgatcttatgtgcaaccatcacctatcaagctgggctaaccccgccaagcggctgctggcaagatgatgataaacaacatggttatcatgcaggtcacccagtcctctttagcaaccacccacgccgttacaaagccttcttctactgcaacacaacaagcttcatgtcatccatcgcccttatcatactcttggtcaatccaaatttgtataggccagccattcatagctatgcgctctctgtttgcatggtggctggcatgtttggtctcatgggtgcctatgctgccggaagctcacaacatatgcggacatccatatatatcttcgttttgctattcatttttctggtcttacttcttgtagcattcgtggtgcaccagaaatctcagggcacgcagaacaggagaacaaatgaagcggaagtacctaatacgaatgacatcaagcgtaaacagtacaccaagcgcaagaacttgatgctactggggattctagcagcgagtgtcacctaccaggccggcttgcacccaccgggtggcgtgtggcagagcaatgatgatgctgggcatgctgcgggtgacccagtcttgcatgacaagcaaaagctacggtatcacgccttcttctacagtaactccatttccttcatggcgtctatcattgttatcatcttgttgttgccagagtcgctaaaactgaatgtcaatgagtggttgttgaaggcaatgaacacgacagttgttctcgacatgattggactcctggtagcctatggtactggctctagtagggattgggacacatctggatatgtcatcgcgatggcaatatttgttctaggctacatttcaatccatgctatgctatcgaagttgagccaggttgccaaccatcgtgttgcttctgaggatcctgagtctcaagtacttggtaatggtttgcatcaggcgcgtggggtctgtgtgggactccatccatccatcaatgttgttcagtgagatgcattttcagcccagtaattctacatactagttgtactatcaaacaaatgatgtactaatgtactactaggtttataatttctctgtttttctactttttctatgcttgtgttctcctaatttcctctatgtctatctttgccaataattatatccatatctttagataac</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0295000, RefSeq:Os06g0295000