Os06g0302000

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Revision as of 09:15, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0302000| Description = BURP domain containing protein| Version = NM_001187809.1 GI:297724748 GeneID:9268400| Length = 4213 bp| Definition ...")
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Gene Name

Os06g0302000

Description

BURP domain containing protein

Version

NM_001187809.1 GI:297724748 GeneID:9268400

Length

4213 bp

Definition

Oryza sativa Japonica Group Os06g0302000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:11382277..11386489

Sequence Coding Region

11383951..11384005,11384105..11384206,11385454..11386283

Expression

GEO Profiles:Os06g0302000

Genome Context

<gbrowseImage1> name=NC_008399:11382277..11386489 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:11382277..11386489 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaaggatacatggaagacagggaacacgaaaagtccctacaagcggagaaagaggaactcaaagaagtttcagtgtcatatggccatgaagtaaaactaagcaatttgttccctacgagattcggacataagaattatcaacacacattcgaaggaatggatcatggacgccatgttcacgcacacggcaacaagatgcagcaactggccgacgtcttcttcttccgcgacgccctccggccgggctccgtcatcacgccgaccatcccgccgacgacctcgctgccggccttcctccctcgccacgtcgccgacgccatcccgttctccgccgaccgctttgccgacgtcctcgccatgttcgcgccggcgtccctcgccatggcgcgcgagatacggtgggcgctcgacacctgcggccagcgggcggcggcgctgctcccgggcgagaaggccggctgcgccacctccctcgagtcgctcgccgacctcgccgcgtcgctcctcgggacgcgcgacgtccgcgcgttctccgccgccgaccttcccaccgacgccgcgaccacgccggcgcggcgcgggaggtacaacgtgacgtccgtgcgggagctctcggcgatggctggttccggttcgtcgtcgtcgtcggagccggcgccggctgccgtcgtggcgtgccacgacctgacgtacccgtacgccgtgttctactgccacagtaccaagccgaccgccgcgtacgcggtgacgctggtggcggcgaccaccggggacggcgacggcgaaggcgaggcggcctcgccggcgaagatggaggcgctcgccgtgtgccacctggacacgtcgcggtggagggcggacaacccgttcttcgtggcgcacggcgtcaagccgggggaggtgtccgtgtgccacttcctcaccaagctcagcatcgtctgggtcccacgccacgagcaggggggcccacgcgcagcagcttaa</cdnaseq>

Protein Sequence

<aaseq>MKGYMEDREHEKSLQAEKEELKEVSVSYGHEVKLSNLFPTRFGH KNYQHTFEGMDHGRHVHAHGNKMQQLADVFFFRDALRPGSVITPTIPPTTSLPAFLPR HVADAIPFSADRFADVLAMFAPASLAMAREIRWALDTCGQRAAALLPGEKAGCATSLE SLADLAASLLGTRDVRAFSAADLPTDAATTPARRGRYNVTSVRELSAMAGSGSSSSSE PAPAAVVACHDLTYPYAVFYCHSTKPTAAYAVTLVAATTGDGDGEGEAASPAKMEALA VCHLDTSRWRADNPFFVAHGVKPGEVSVCHFLTKLSIVWVPRHEQGGPRAAA</aaseq>

Gene Sequence

<dnaseqindica>1675..1729#1829..1930#3178..4007#atgaatatgaaaagtctgtacacatagacaaaggtgagaatatttggaagaacatttggcgtattgtattttcgtaaaagttgttgacatatatagataatataaaaatattttctgtattgcccgtaaattgtagaggacctcaaagaagtctcagtgtcatatggctcaaatgtgaaactaagcaatttgttcccaacagggtatgcacatcagaaatatatattaacaagcggaggtaacattagaactagtggatgctcatgttacgtatattgtgtgtatatgttatatacatgtatatttgaaattataaaatgggccatatgagttgcagctggactaaaggaagtctccgtgacatatggaagtgatggtgaagaggagccaaggaaaacattctctaaagtagggtatatgttagataaggaatgcaagaagtcttcagatgtagacgaaggtacaatattttggagtgcattatgtattttgtatttttctctaggttgttgacatattcggaaaaactaaataaattgtttctacatggaccatgaactgtagaggaactcagagaagtctcagtctcatatggcccaaaattgaaactaaacaattagttccccacagaacataagaaatatatatacacaaacgaagataagattatttcgaactaaaggatgttagtgtaatgtattgtatgtctcatataaatgtatattgtaaataaaataaattggccatatgggctgtagggggactaaaggaagtctcggtgtcatatggaagtaatggtgaagaggagaccagcaaaaccactcctatgggaggatacatggtagatatgaaaaacgaaaagtctctgcaagcagagaaaggtgagaacaggatgtgtgcacaattcatgaattaatatattgttgacataatatagaaaactaaatgaattgtttctacatggactgccaactgtagaggaactcaaagaagtttcagtgtcatacggttcagatgtaaaactaggcaatttgttccccatagaacacaagaaatatgtatacagaaatgaaagtgagattattttgaaactaaaggagatgttagtgcaatgtattgtatgtcttatataaatgtctattgaaaataaaaataaatgagccatacgagctgcagatggactaaaggaagtctcggtgtcatatggaagtaatggtgaagaggatacaagcaaaacctttgctatgggaggatacatggttgataacgaacgtgaaatgtctctacaaggacagaaaggtgagaatagaaagtatactcacaattcatgaattgtagttttgtatacattgttgacataatatagaaaaccaaataacctgtttctacatgcatgagctaccaactttagaggaactcaatgacatttcattgtcacatggtccagatgtaaaactaaacattttgttttccacataacacaagaaatatatatatgcaaacaaatgtgagattatctgggactaaaagatgttagtgtaatgtattctatgtaagacatagatgtctactgaaaataaaaataaatgggccatacaagttgcattgggactaaaagaagtctcggtgtcatatggaagtaatgatgaagaggagacaagaaaaatcattcctatgaaaggatacatggaagacagggaacacgaaaagtccctacaagcggagaaaggtgagaataggaagtatgcataaaattgaattgataagtatattgttgatataatacagaaaactaaataaattgtctctacatcggcgtcaactatagaggaactcaaagaagtttcagtgtcatatggccatgaagtaaaactaagcaatttgttccctacgagattcggacataagaattatcaacacacattcgaaggtgagaatatttggaaatagcaagtttgtctgttatactttcatataacttatgaatgcgtctagaaaagcaattagggtattcatactgtaagttgttttcctttgaaccttttgtgtttcccttaaaattgtctaagcacgtacattttgatagagcgatgctattacatatctcggttaccaagagacactaaattttatgttaaaaatatatttgtcacctctcaccatcatccaggactgtaaaatttctcaccatcatccaggactgtaaaatttctcattttgatgactttcttaatcttgtatagcctatcgatatatgcatcggcatatatatatatatatatatatatatagttcactatgcttgtaactcaaagatacaaagtggataattgtaataataataaaataaacatggttcaccaatctagaaatttcaaccattggcggatcttaatatatactctttccttgtcaaaatatatatctatctttgtatttcaaatttttacctcttaaccacttaagaaatgcatttccttaagatcttattcggtttagaggggattaaagaggattggaggggattgaggaggaataattccacaccacaatatgtgtggaataaatctcccccaatccgtccctcacagggattaaccaatcaaggcctaagggagctaccaaaatttatctcacaagttatactttcaattctttttcaaactctctgagacatatacatacatgtgtgaaacattaattttctttttttttctttcttttctatatggtatataaggatagaatgattattttattcataccgctgttcgctgcatgcgaggatgacttggcatgctcacgtagcaccttttgtgggtccaaggactatattaacccaaatgattaatttgaaagacttatttgaacgatttgaaacctcaaggactaaactgagctcgaagcgaaactatagggatcatattcaccctaaaataaacatggttcaccggtctagaaatttcaagcattggcagatcttaatacatactctttccatgttaaaatgtagctatctttgaatttcaaatttttacctcttaaccacttaagaaatgcatttccttaacggaactaccaaaatttatctcacaagttgtactgccagttctttctcaaactctttgaggcgatatacatacctctagctattctacgttgttggttcattcgcaggaatggatcatggacgccatgttcacgcacacggcaacaagatgcagcaactggccgacgtcttcttcttccgcgacgccctccggccgggctccgtcatcacgccgaccatcccgccgacgacctcgctgccggccttcctccctcgccacgtcgccgacgccatcccgttctccgccgaccgctttgccgacgtcctcgccatgttcgcgccggcgtccctcgccatggcgcgcgagatacggtgggcgctcgacacctgcggccagcgggcggcggcgctgctcccgggcgagaaggccggctgcgccacctccctcgagtcgctcgccgacctcgccgcgtcgctcctcgggacgcgcgacgtccgcgcgttctccgccgccgaccttcccaccgacgccgcgaccacgccggcgcggcgcgggaggtacaacgtgacgtccgtgcgggagctctcggcgatggctggttccggttcgtcgtcgtcgtcggagccggcgccggctgccgtcgtggcgtgccacgacctgacgtacccgtacgccgtgttctactgccacagtaccaagccgaccgccgcgtacgcggtgacgctggtggcggcgaccaccggggacggcgacggcgaaggcgaggcggcctcgccggcgaagatggaggcgctcgccgtgtgccacctggacacgtcgcggtggagggcggacaacccgttcttcgtggcgcacggcgtcaagccgggggaggtgtccgtgtgccacttcctcaccaagctcagcatcgtctgggtcccacgccacgagcaggggggcccacgcgcagcagcttaatcatcatcgatgatgtaaacaagctctacaacctaaagtgaacaatttggcgtggtttgtgcgtaatttgcagcaacggtcgatcgagctatctacttatatagtatgtaaaaagtgaataattcagtttgtcatcgtgtgaaccacatgtgtgctgcatatttgtgcgtgtgcatgttcataattaatatggatattgtgtcttc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0302000, RefSeq:Os06g0302000