Os06g0303700

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Revision as of 09:15, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0303700| Description = Homeodomain-like containing protein| Version = NM_001063997.2 GI:297605668 GeneID:4340836| Length = 7629 bp| Defini...")
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Gene Name

Os06g0303700

Description

Homeodomain-like containing protein

Version

NM_001063997.2 GI:297605668 GeneID:4340836

Length

7629 bp

Definition

Oryza sativa Japonica Group Os06g0303700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:11521024..11528652

Sequence Coding Region

11521024..11522130,11522886..11522970,11523297..11523408,11524075..11524187,11524696..11524754
,11524812..11524925,11524970..11525057,11525709..11525806,11525971..11526047
,11526776..11526850,11527744..11527806,11528508..11528652

Expression

GEO Profiles:Os06g0303700

Genome Context

<gbrowseImage1> name=NC_008399:11521024..11528652 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:11521024..11528652 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcggagagggagcggaacggcgcagcaagaagaaggagaaggggaagcgccaggaggagaaggctgaatcgggcagtcgcggcgatggagaggcagtgaagctggatttggctacagatttcccaagtaatagcatggggaaggttgcaatggacgttgaggaggcgaaagaagtgcacaggaggaagaagaggaaggagaaggagaaggaccacggaaaggagaagaagaacaaggtcattgccgataacatcgaggaggcctgtgccgaggcggagcaggctgaagcttcaggactgaaggtggagcagcactgctcggagcatgttcagggtgatatgagcaaatgcggctcggaggaagacaagagtattaagaaagataataagttgatgaagaagaagaagaagaaagagagaaaagtggagatggctgaagaggggcagatacttgctggttctactgatgaaaatgcaggcttgttgcatgcggagatgggcaggggtgaaaaggaacagggtaagaagtccaagaagagcaaacggaagcatgaggatggtgagcctgtggcagatggatctgccggtgatgaaatcatgaccaacagagataagaagaggagaagaaaggagcattctgttgagctgaaagagggtgatcaagttaacatatctaagaaggcagtgaagataaagggaaacaagaagagaaaaaatgaaagcgataagtttaatcctgacttaagcactgatgcactcactggagaagataaggttggtggagatggcaaaaatgataagagaaaaaagaagaacgatacatcgactagaaggaatgaggttggtagggatgataagaatgataagaaaaaaaagaagagcaaggaaaggaacggtggaagaaaaggcgaaaaagaaaaagcagcccagtcaaaggacaaggttaggcgggtgagcttttctgatgctgtggaggtgtttagcatcaacgacggtgaagatgaagataatggcaagagtgctgaatccgaagttgtgcatgggaaacgttttactccagaagaaaacgcgacccttatggaggccatcatgagctatatagagatgaagcaattgggagagaatgggctagagatgattcgagcttgtagtaaacatccagagcttaagggttgttgggcggagattggaaaatcattacctcacaggccattgacagccatatacaagagagcacggattttactctataggagtgatgagcgtaaatggactccggaggagtatgagaagattcgccggcatgttgaaaagaacggcacttcttggatatcattagcacaggaacttggaaagagtgagatccatttaaaggacacttggagaagaatcaaacctaaaaacttgaaatcagtacccgaactgcctgaacctccaccagtagatgacgccaacaggccccaactcctcaagccgccagtccagcatgccaccacccccaggcgcatcggattgacagatcagggatgcagaggcgaggcggtgacagtgcaggggcagaggctgctcagctggcgggctaaggtggttgggcagctggcatcgacagccaacgaaaagggctggagcaagctagttgtagtgccagaggcaagcagtggatgcccattccctggccagtggacacaggacgagtaccaaaacttgtttgatttggtgaacttggacttgcgagtgaaagctcatcaagagtatgatgctggtaatcgtaagttaagagacaacattgcatgggaggctattagtgataaattgacaacccgaaatcacaagaattgctgccttaagtggtactaccagttagcatcaccactggttcagaaaggcatctgggcagacactgatgattatcgattggtggaagcgcttcaaaatgttgatgctgtttgtgttgaagatattgactgggataaccttcttgatcacaggtctggagaggtttgccgtcaacgatggaacgagatggtccgctatttaggtggccacaaggagaagcccttcattgaacaagtggaagtgttgtcgaagcgctactgcccagaaatggttgactatagggaaggggaagcgtag</cdnaseq>

Protein Sequence

<aaseq>MGGEGAERRSKKKEKGKRQEEKAESGSRGDGEAVKLDLATDFPS NSMGKVAMDVEEAKEVHRRKKRKEKEKDHGKEKKNKVIADNIEEACAEAEQAEASGLK VEQHCSEHVQGDMSKCGSEEDKSIKKDNKLMKKKKKKERKVEMAEEGQILAGSTDENA GLLHAEMGRGEKEQGKKSKKSKRKHEDGEPVADGSAGDEIMTNRDKKRRRKEHSVELK EGDQVNISKKAVKIKGNKKRKNESDKFNPDLSTDALTGEDKVGGDGKNDKRKKKNDTS TRRNEVGRDDKNDKKKKKSKERNGGRKGEKEKAAQSKDKVRRVSFSDAVEVFSINDGE DEDNGKSAESEVVHGKRFTPEENATLMEAIMSYIEMKQLGENGLEMIRACSKHPELKG CWAEIGKSLPHRPLTAIYKRARILLYRSDERKWTPEEYEKIRRHVEKNGTSWISLAQE LGKSEIHLKDTWRRIKPKNLKSVPELPEPPPVDDANRPQLLKPPVQHATTPRRIGLTD QGCRGEAVTVQGQRLLSWRAKVVGQLASTANEKGWSKLVVVPEASSGCPFPGQWTQDE YQNLFDLVNLDLRVKAHQEYDAGNRKLRDNIAWEAISDKLTTRNHKNCCLKWYYQLAS PLVQKGIWADTDDYRLVEALQNVDAVCVEDIDWDNLLDHRSGEVCRQRWNEMVRYLGG HKEKPFIEQVEVLSKRYCPEMVDYREGEA</aaseq>

Gene Sequence

<dnaseqindica>1..1107#1863..1947#2274..2385#3052..3164#3673..3731#3789..3902#3947..4034#4686..4783#4948..5024#5753..5827#6721..6783#7485..7629#atgggcggagagggagcggaacggcgcagcaagaagaaggagaaggggaagcgccaggaggagaaggctgaatcgggcagtcgcggcgatggagaggcagtgaagctggatttggctacagatttcccaagtaatagcatggggaaggttgcaatggacgttgaggaggcgaaagaagtgcacaggaggaagaagaggaaggagaaggagaaggaccacggaaaggagaagaagaacaaggtcattgccgataacatcgaggaggcctgtgccgaggcggagcaggctgaagcttcaggactgaaggtggagcagcactgctcggagcatgttcagggtgatatgagcaaatgcggctcggaggaagacaagagtattaagaaagataataagttgatgaagaagaagaagaagaaagagagaaaagtggagatggctgaagaggggcagatacttgctggttctactgatgaaaatgcaggcttgttgcatgcggagatgggcaggggtgaaaaggaacagggtaagaagtccaagaagagcaaacggaagcatgaggatggtgagcctgtggcagatggatctgccggtgatgaaatcatgaccaacagagataagaagaggagaagaaaggagcattctgttgagctgaaagagggtgatcaagttaacatatctaagaaggcagtgaagataaagggaaacaagaagagaaaaaatgaaagcgataagtttaatcctgacttaagcactgatgcactcactggagaagataaggttggtggagatggcaaaaatgataagagaaaaaagaagaacgatacatcgactagaaggaatgaggttggtagggatgataagaatgataagaaaaaaaagaagagcaaggaaaggaacggtggaagaaaaggcgaaaaagaaaaagcagcccagtcaaaggacaaggttaggcgggtgagcttttctgatgctgtggaggtgtttagcatcaacgacggtgaagatgaagataatggcaagagtgctgaatccgaagttgtgcatgggaaacgttttactccagaagaaaacgcgacccttatggaggccatcatgagctatatagaggttgcctctccttcgaatgcttagcatctttcctctttacttcaatacctgaatatatgaaaatatatgaaacagtgacaagcacactaaagttgaatgagaactatgccactgactgtataagacaaacctggctgttctttatgactgattttttcttgtctttattgcactcagatgatctattaatcatgtttaacaaacatgccaatcctctgtcatcaaatttaaaacatatattgatgaaagcatgcactttagctgtgcagttcaacaatccctccgtcctaaaatatagctacttaggaagcttttggagggattaaggattatggtgcaaggtcaaaactgcccatcattatagtagggctaagtagttggtgtgatatagattgctaggggtacgatggaaaagtaagctaaaggaatttgaatttcaaaggtagctatattttgggacggagggaatatcagaatccatctgttgcattgtttattaattttccattgcaataatctttttttggggaagttaacagaaatttcatgatttagcttggacaccactttgttgttagtaaacttttacgctgtatcactggttttcaaatatgctggtggtattcttttggtgtttggatttcatctcatgattctactagtcttttattactactaaactaaatggtgcatggaaactccatgcctcgcaatataaagtttaaacacattacatgttttatttttcattttagatgaagcaattgggagagaatgggctagagatgattcgagcttgtagtaaacatccagagcttaagggttgttgggcggagattggtaagatgagaacatcttctatatctaactcttcacttttgtttcccttatgtctgcttgtgtttgtgtttccctaatgtcattattcttttatccctgcaaagaaagtaaaatctccttgttgccccaatactgaaatctctttcattgcattgcaaagttcaattttccaacagaatatgcactttgcatatattttggaatatcggcactgggaacagtgaaaaattgcttcccgctcattcactacatcatgttcacttttcccttatctacatggcagacagcatatcatgttactcattaatgcacgacatcctttgcaggaaaatcattacctcacaggccattgacagccatatacaagagagcacggattttactctataggagtgatgagcgtaaatggactccggaggagtatgagaagattcgccggtaatataaagccctcctatggttgagctaatgcagatttctatttcctgcatatcgtattttcaaaacaattccatagtccatacttgctaatgttttgtactttcagctatacagatcaaactattttgaaaagagctacacaaatcaaaacctttttcataaaatggtgcacaaatcaatcatctagaagcgtgaatatcagtcctcaaatatatcttgaatgttctgtatgtgctcaaggatccacagagttaatttgtagagcatcacccaatttttgaagttaaataaattcagattcaatttttgaagttaaataaattcagattgcttgtatggtaataacttatgtagcttgctctatcccctttttttagtctttaaggtaatgttcacaaccatgagtgaggtcaaactaaaacctttgtaacttcatgttgacgttttgcaatttgctttgaacggttcgactatatttttgactgaggttgtttctgttggatttttcatatttgttcatatcatttcacatcatcctgcaaagtgattgatacatcagtctatccaaagcataatttattggcattttgtcttcataaaacctaaatgtgagcagtatgttttttgaaaggcttattaagatcagtgtgtattatgacacaggcatgttgaaaagaacggcacttcttggatatcattagcacaggaacttggaaagagtgagatccatttaaaggacacttggagaagaatcaaacctaaaaacttgaaatcaggtactggttgctgcaattccgctgtttgaagttcaatatttctttgcaatatgcttggcttttaacttctaaaaatgttcactttcggtattcaaaaaaaatgttcttttcttttgtgcattcttccagaattccttttctcccattatacatagcactttcttgaattggttattatgcacgtaaaatgcttgcgctaactgcaggctgactctgtactgtagttagtttttgtttagctgtataacatacatcaaatgtgggacttcgtgagaagaggaaatcggatatgaaacctgttgtcaaaacttgtatcaggagtgcaggcgtggcaaacatgacttgtacagacctcacagtattatatgtgcaggcatagcagacacaactagggtgggcaaaaaagaccaaaaccaaaaaccaaacccgaagtcacctatggtgcttggtccatatatttgtgcggaaagactggttgttttttaggttgtttggttctgtacgtcagtacccgaactgcctgaacctccaccagtagatgacgccaacaggccccaactcctcaaggtcccagttagttctagacaccattccccattccatttgcgtacttctcaaccctagccgccagtccagcatgccaccacccccaggcgcatcggattgacagatcagggatgcagaggcgaggcggtgacagtgcaggggcagaggctgctcagctggcgggctaaggtggtgaggcatggccacctgggggtgttgctgcctgggaggtgtaggttgggcagctggcatcgacagccaacgaaaagggctggagcaagctagttgtagtgccagaggcaagcagtggatgcccattccctggtttctcatatgtcagtttttgtcattttgtgattgggacctgtgatctctgacttcttttttgatattttgattagtttatttgtctatttagttcataattgttgattaagaatcatttcgaaggctggcttaatgactttgatatgctctgtgctaaattgatcagatcgtgcaagaacaaagactggactgatcgttcggttacccaaattgtcggttcatgaatttgtgttggcagcatcggtttctcctttctgaagacctttgaaaggccgaactaaccggaccgaattttcggtctagaccgaatatccacccctagacacaacttgttacaaatctgtcatattttgtttttctaactctgaacacactggaaactacatgcaaaaacttcataatacggtgttgattacgaaattgcattttctacttgaatttcattgtcagttgcgagattttgcatttccattaaatggaaagacagtttgcagagtaagttatgaagggtccacttgcgcttcactatgcgaatgatgtttgatgcctcttgtgcaatgaatgcaacacaatgcaatcatataaagtaaaatgtataccatggttcataactttttactgtttgtgtgttcattggttatatttcaggccagtggacacaggacgagtaccaaaacttgtttgatttggtgaacttggacttgcgagtgaaagctcatcaagagtatgatgctggtaatcgtaaggtaaaatttactactgttcgactgttcgttggtgtattccaggcctgctgtaatatttttacaacttttcatactgtacgttagcttgcatatttggcactgttcattattatttcatcccatcattccttgttatgaagtaatttacttgctttttgtgacagttaagagacaacattgcatgggaggctattagtgataaattgacaacccgaaatcacaagaattgctgccttaagtggttagtattgagctacctgcattccagtactttatgttttcttttcccagctgattccagatctgaggtgctgtgatcatatcattatctgtgcatcacatcagatttgtctgggcaataataatacctagagtgtttttaaaatgagaaatatatatcatgagaaaaacatatatttttcttcaccttaggggcattttagttattttaggtcataaaatttggttggcttggtatctgtgcatggttaatacttacaagtgaaaccccaaaaccaagagagtagtatacctacggtctacggtgcctccttacatagggatctactttttcctattttttctggatcctttcctgattttcgtactctttcatatgctgctgggaactcatgctttctattgtcattggatccattggtatatagccagcaggctgcgggccaaccattgctgttgcttctaatcttctgctgtggctgtgcgcattattacatcacattgattggcctagtcgtcaaaagagagtgttgctcacaggcgaaattgttgaggttttatggcaatgtgcatttgacagaactttaactaatcgatcccatcctttttgtacagctaaacctgctctatcttgcataaatcttatgcttctagatgaatttgctatcatcagagtaggttgtttgcttgtacttgtacatgtcgaattaattcaatccacactttcaggtactaccagttagcatcaccactggttcagaaaggcatctgggcagacactgatgattatcgattggtggaagcgtaagtttgtacagatttttaccaaattcattgttcttttcaaaatttaatgctatgtcctttatacccgagagttctaaaatagtagttgtttcagttttaatctggtttttgtcgaaatgtccttaagcttattgatggtacggtttgcacttatttttgttgatatggaagtgtgcatgtatataatactacaaatattagaagtactatggatttttcacaaatttgagagtttttgctttgcctatcctgtttatgttaccatgaggtcacaaatttgatgaagaattggaaactaggctttgatttcattttcccttttttaattactggcactagggcaccttaagttgtctacctttggttttaaacaaacgcaccgctgacatagaacccaagtaatgactgatgagtgtcaactaatggcatgagaatcggaaaatttttctctattatttgaagttgtctatatgctacactataatttcataggaatcaagggaaatccttatcctcaatgggcatactgcacaagatagcacatgccatgacatgccatttaatttattgtgaaagctaatttacaatttaggctttgcattcaatggaccgatggagcacatcttctctttcttcagaaagcagagttggtcagaaagcatactacctaaacaaaattcgattgatgagatgttgaaatagtagattgctgtattagactctgattgctgcgattgttaattagtttaaatgttattgattttcttggactttattggattggattagatagtggattgtgtttttttttcagttttaggcctcttgtctcctcacgttaagtcttgctagcatgaaattttataactaatcgctgaatcttcttccaggcttcaaaatgttgatgctgtttgtgttgaagatattgactgggataaccttcttgatcacaggtgagtgctcaaatatttctgatctaccttcaatcttgtttgttcagggaaaaaaacttcttagccccctataaagtatttgttctacgattactttaccacctccttctttaaagtatgaaaccaggtattcaatcccctgaagtatcaaacccaggtcaaataatctgccctaccctgtatttcaatggaaaccttgggctgcatgtcgctactcttcatgccttttttttttctctacatttgtataatcgtattaaggaatttaagttcactatggatgcacaatagcatgtgcactagttaaatgtgggttctttcatgctgaccagtttgattgcacctgccagtcttataatgtggagacagtagtgcagatcagcaaggtttatttttttggtaatgaatgcagatattagaggcttagagttttccctatagaggtacttgttacctatagtgatcgaagttgcattcgaggtataatatttgacttgggacttgaagagaaccatacattttgcactgttgagcaatctatcttttttttttctttttgctgaaaatatatgacgttctgtaggcattaccaagaacctatttaaaccttttgaaattggcatgtatttccatgtgcgttgaagtttggttccatttggttacaaatttataataacggagtatttcattcactctactaggtctggagaggtttgccgtcaacgatggaacgagatggtccgctatttaggtggccacaaggagaagcccttcattgaacaagtggaagtgttgtcgaagcgctactgcccagaaatggttgactatagggaaggggaagcgtag</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0303700, RefSeq:Os06g0303700