Os06g0307900

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Revision as of 09:16, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0307900| Description = Protein of unknown function DUF1618 domain containing protein| Version = NM_001187812.1 GI:297724754 GeneID:9267634| ...")
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Gene Name

Os06g0307900

Description

Protein of unknown function DUF1618 domain containing protein

Version

NM_001187812.1 GI:297724754 GeneID:9267634

Length

3786 bp

Definition

Oryza sativa Japonica Group Os06g0307900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:11737580..11741365

Sequence Coding Region

11738861..11738893,11738991..11739209,11739737..11739909,11740073..11741252

Expression

GEO Profiles:Os06g0307900

Genome Context

<gbrowseImage1> name=NC_008399:11737580..11741365 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:11737580..11741365 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggaggggagctcgtctgcggcggaggagctggcgcgggggtgggtcatactcgatcgcgtcgcgtgcgtggacgacgaggaagatccgcgggaggtcgccctcaacgtcgccgagccgccgcgtctgtcgacgctcaccgtgccggccaagttccacgctctcccgagcaacccggacgagctaccgtacgtcgccgccgccgaccccttcggcctcctcgtccacaccgcggcgagcccctcctgcggcctcaacctcgacgacgacccacccggtagcttcgccgtgcttcgcgaattcctccccgtcggggccagcaacccccacgaggccaccggaatcgccgagcgtgtcccggagcgagtcggcggatccgtgccccacatctccaacctcaagaacgtcggcttcctcacctcccctggaaccggcggcaaggactacgccatcgctgagttgcagatcgaggccggcgccgaactcgccaagctgattgtcttccgttctggaactcccgcttgggcagtgagtcgtctcatccgccctgatatgcccggacgaagtaatttgcactgggggtggcacaacgatgatgtcatttcgttcgatgggaacctttggtttgttaatctgtggaggggtctcatcagctgcaacccgttcagtgatcatcctgttctgcagtttcaccagctcccagagcatatcccgatagaagaccaaaacaaatcacagcgtgatattgaggctgatcgctgtgtcagggttagcaaagagagattgcgctacgtggagataacccgtgtacacaatgctccagttgagtcaactactgttgttgtttgggtgctgatctgcggtccgagaagcatgtcgtattggaagaccaattgcatggcatttcttggggacatttgggagaatgagacctacaaggcaacgggtttgcccaaccaggtcccaatccttgcaggcatacaccccagcaaccctgatttggtttacttctttctggagcatcacctgtttggcgtcaatctgtacaagaagatggttattcactttgtcgatgaacattaccagcttttgcagccaattgttcgctcccgctcgctgcagccactctcttggcaccaagtacagctttggaagctacctccgtcacttcacgcaggttcaatagaactgtcagcacagcacgctagtgacttaggtaacctccacctgaaggctgctcagctacggcgtcaagaacatgctttaaagagacgtgaaaagatgattgagatgcgagaggaatcagtgcaaggattgcacaaatcacttttggcacccgaggaaaagaaggacgactctcgctgggataaggtccagatcgtgattcttgccgtactgatatctggactttcccttctgttcccattcctaccttggctcccctatgagtatctcagcacaatagtgatagcatttagcattgtagtgggttgctgctgcattgctctgccttgtgctctttttggctcaaacaagtggcagacttgctgtggagagagtgttgcacgactccggctgacccagggtttgcatggaaattga</cdnaseq>

Protein Sequence

<aaseq>MEEGSSSAAEELARGWVILDRVACVDDEEDPREVALNVAEPPRL STLTVPAKFHALPSNPDELPYVAAADPFGLLVHTAASPSCGLNLDDDPPGSFAVLREF LPVGASNPHEATGIAERVPERVGGSVPHISNLKNVGFLTSPGTGGKDYAIAELQIEAG AELAKLIVFRSGTPAWAVSRLIRPDMPGRSNLHWGWHNDDVISFDGNLWFVNLWRGLI SCNPFSDHPVLQFHQLPEHIPIEDQNKSQRDIEADRCVRVSKERLRYVEITRVHNAPV ESTTVVVWVLICGPRSMSYWKTNCMAFLGDIWENETYKATGLPNQVPILAGIHPSNPD LVYFFLEHHLFGVNLYKKMVIHFVDEHYQLLQPIVRSRSLQPLSWHQVQLWKLPPSLH AGSIELSAQHASDLGNLHLKAAQLRRQEHALKRREKMIEMREESVQGLHKSLLAPEEK KDDSRWDKVQIVILAVLISGLSLLFPFLPWLPYEYLSTIVIAFSIVVGCCCIALPCAL FGSNKWQTCCGESVARLRLTQGLHGN</aaseq>

Gene Sequence

<dnaseqindica>2473..2505#2157..2375#1457..1629#114..1293#aaaaaaaaaactcaaacccaaacccctcttcctctcccatctcccaatcttcgtcctcttcctctccgtctcgccacctcgccggtgtccgccggtgccggtggtggtgcggaatggaggaggggagctcgtctgcggcggaggagctggcgcgggggtgggtcatactcgatcgcgtcgcgtgcgtggacgacgaggaagatccgcgggaggtcgccctcaacgtcgccgagccgccgcgtctgtcgacgctcaccgtgccggccaagttccacgctctcccgagcaacccggacgagctaccgtacgtcgccgccgccgaccccttcggcctcctcgtccacaccgcggcgagcccctcctgcggcctcaacctcgacgacgacccacccggtagcttcgccgtgcttcgcgaattcctccccgtcggggccagcaacccccacgaggccaccggaatcgccgagcgtgtcccggagcgagtcggcggatccgtgccccacatctccaacctcaagaacgtcggcttcctcacctcccctggaaccggcggcaaggactacgccatcgctgagttgcagatcgaggccggcgccgaactcgccaagctgattgtcttccgttctggaactcccgcttgggcagtgagtcgtctcatccgccctgatatgcccggacgaagtaatttgcactgggggtggcacaacgatgatgtcatttcgttcgatgggaacctttggtttgttaatctgtggaggggtctcatcagctgcaacccgttcagtgatcatcctgttctgcagtttcaccagctcccagagcatatcccgatagaagaccaaaacaaatcacagcgtgatattgaggctgatcgctgtgtcagggttagcaaagagagattgcgctacgtggagataacccgtgtacacaatgctccagttgagtcaactactgttgttgtttgggtgctgatctgcggtccgagaagcatgtcgtattggaagaccaattgcatggcatttcttggggacatttgggagaatgagacctacaaggcaacgggtttgcccaaccaggtcccaatccttgcaggcatacaccccagcaaccctgatttggtttacttctttctggagcatcacctgtttggcgtcaatctgtacaagaagatggttattcactttgtcgatgaacattaccagcttttgcagccaattgttcgctcccgctcgctgcagccactctcttggcaccaagtacagctttggaagctacctccgtcacttcacgcaggtagaaatgttcctataccatatgcaaaaattagacataattcttccaagcctgtatcactgtacgttgaatgacattagaagctagaaatgttcctataccatatatatgtaccacagaataaaacagggtgtaccttactaagtttggttattttttgaaggttcaatagaactgtcagcacagcacgctagtgacttaggtaacctccacctgaaggctgctcagctacggcgtcaagaacatgctttaaagagacgtgaaaagatgattgagatgcgagaggaatcagtgcaaggattgcacaaatcacttttggcacccgaggaaaagaaggtattacaaattttttccaagacttttgaatttctcttttatgaagaaatttctgcattatccatgaaatcgtgtttctataaaaaaatatatctaatatcagtatgcatgcttatagcatagttatacattgtcccatatgattcaaaatgaatgcttgaaatgtaaatcccatagcacataggaccatcaacttccagaatgttttgtgcgtgtaacatggtcctgagcaatatattttcttttacataagctagaattgcagggaattagatgaaccttctacattgcacatgaaaagtcaaccggctaacctcttgcatgttgataatttgaccccatgcacctaaataatgaatggttcagattaatccaccacttttacctccttggtggtaagttggagtactcttttttccccacctttaattgtgggctgcttagggtggataagtgatttaaatgattagcacggagttacccatgctaattcaattttgctcagtaactctttataattcttgtaggacgactctcgctgggataaggtccagatcgtgattcttgccgtactgatatctggactttcccttctgttcccattcctaccttggctcccctatgagtatctcagcacaatagtgatagcatttagcattgtagtgggttgctgctgcattgctctgccttgtgctctttttggctcaaacaagtggcagacttgctgtggagagagtgttgcacgagtaggcttcatgcttttttcactgtttgtcttgtactgcctgtatcgaatggcacttgatcctacactggagatgactggccactctgcccctccagctccggctgacccagggtttgcatggaaattgatgaggacctacgaagcacttgcagttgtagtaacatcgggacaggtcatctcttgggttttggtacgttactatattctcaaagtttttgccactgtttttactctcttagaaagctatattaactaatagcatgtcatggaaaacagagttgttgctgtggaaagacatagatgaccaggaagtattcagaggtacatactttggaggtatgctttcataatggtcattatcatcgctcataaaattcattatttatgttataatcttatttttcttgtcttttcttgatttaggttggtttctggatcacaaagtatccatatccgtagtgaaggtagcaagttttgacacgggagttgagatttactgaccaaggatatccatttttcgttttaggacttggatattgttttttgggccacggtatcacattttagtgctctgtagcattcccttttgaagaattgaatgatactgttacattacaaatcatcaatcaataactcccctaaccatcccctttttctccgatttttcattttttttctggctatctggttgttttacacgtctccgtttactgttatctgctcctcggcctaatctgcatgcttatgcgttgccggtgcgccggttggctgcttgattataccggttaattacgtatttagtttgttcatttggggtgtggttgccggtcattgtgacggttgtttccggttggctggtgcgttgagtgacgcgtgccatgctgtcattttttgttttgatctacttgtttcttctgttatttcagatcggtctatcggttatgcattctgtgcctttgtgactttttgtttaggtccttgctattgttgaaaattgaatgtgaagaagacaaaattctgtttttggggtgtgtttgtggtttcttcttttgctgggtatggaggtgcgattttccccatctgcagtcttccgttctgggcgcgcgtcttcgtgctctccggtgagagcgacatgggcggccgcggcggcgtccaccaccggcgctgggacggcgtagtgccgccctagtacctttaccatccaagcctttccaacattgcaatgttaccagtctgaagctttctaacaatagcacggcatagaaatattatctctctgaggatgaatcattttactcaactaaggatggatcgtcatggttccctttctatttctcttttggtcctatgtatatacgcaaactggaaaggaaacggagatctatgtatatatggtggtgtttggttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0307900, RefSeq:Os06g0307900