Os06g0308300

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Revision as of 09:16, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0308300| Description = Similar to 65kD microtubule associated protein| Version = NM_001064010.1 GI:115467751 GeneID:4340849| Length = 4389 ...")
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Gene Name

Os06g0308300

Description

Similar to 65kD microtubule associated protein

Version

NM_001064010.1 GI:115467751 GeneID:4340849

Length

4389 bp

Definition

Oryza sativa Japonica Group Os06g0308300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:11764906..11769294

Sequence Coding Region

11765199..11765501,11765838..11765986,11766182..11766269,11766395..11766706,11766798..11766953
,11767185..11767400,11767495..11767752,11767984..11768187,11768296..11768340

Expression

GEO Profiles:Os06g0308300

Genome Context

<gbrowseImage1> name=NC_008399:11764906..11769294 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:11764906..11769294 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctggcgacattacgtgtggatccttgctgcagaaactgcagttgatatgggatgaagttggtgagagcgacgaggaccgcgacaaggtcctgtaccagttagatcaggagtgcctggatgtttacaagaggaaagttgaccaggccaccgactctagggatctccttatccaggcgctggatgactcgaagattgagctggccagacttttatctgctctaggagagaaggccatagcaagaactcctgagaagacgtctgggacaatcaagcaacaacttgctgctatagcgccaacactcgagaagttgaacaagcagaaaaacgaaagagtgcgggaatttgttaatgttcagtcacaaattgatcaaatatgtggtgagattgctggcactacggaggtgggtgagaaggtggcaacgccacaagttaatgaggatgatttgacacttgagaggcttgaagaatttcgttcacaactacaggagctcgaaaaagagaagagcaataggttggagaaggttcttgattatgtgagcatgatacataatctctgtactgtcttagggatggattttcttagcacagtgactgaagttcatcccagtttggatgactctattggtgacaactgcaagagcattagcaatgatacactgtcaaaacttgacaagactgtagccacacttaatgaagacaaaaagtcaagactaagcaagcttcaagagcttgctggtcaactctacgatctttgggatctcatggatgcccccatgcaagaaaggagcatgtttgatcatgtcacctgcaacagatcagcctctgtagacaaagtcactgcacctggagctcttgccctggatctcattgagcaagctgaggtagaggttcaaaggctagaccagctaaaatacagcaagatgaaggaaatagctttcaagaagcaaactgagttggaagacatctatgctggtgctcacatggtaatagatacagctgctgcccatgaaaaaatattggcgctgattgaggcagggaacatagaaccatcagaattgattgcagatatggaaagccagatatcaaaagcaaaggaagaagcattgagtagaaaagaaatattagacaaagttgaaagatggatgtctgcttgtgaagaagaaagctggcttgaagattataaccgggatgacaacagatataactcaagccgaggtgcccacctgaatctcaaacgtgctgaaaaggctcggattcttgtcaacaagattccagcacttgttgaaactctggtggcaaagaccagggcatgggaggagagccgtggtctgtcctttatgtatgatggtgtacctcttctagctatgttggatgaatatgtcatgctaaggcaggaaagggaagaagataagaaaagaatgagggaacaaaagcgctacatcgagcaacaactgaacaccgaccatgaagggccatttggttcacgtgtgagccctaacagaccagtcagtgcaaagaaggtacctggtgcaaaatcaaatggcagtgctaatggcactcctccgaataggagactttcggtcagcggtcaccagaacggaaggtctggaggaaaggatggcaagagggactctgccaagacagcttcccccgggaatgtagcagctgctaaggaagatgcatcctcacacatttctggcaccgatccggttccgagcacaccatga</cdnaseq>

Protein Sequence

<aaseq>MAGDITCGSLLQKLQLIWDEVGESDEDRDKVLYQLDQECLDVYK RKVDQATDSRDLLIQALDDSKIELARLLSALGEKAIARTPEKTSGTIKQQLAAIAPTL EKLNKQKNERVREFVNVQSQIDQICGEIAGTTEVGEKVATPQVNEDDLTLERLEEFRS QLQELEKEKSNRLEKVLDYVSMIHNLCTVLGMDFLSTVTEVHPSLDDSIGDNCKSISN DTLSKLDKTVATLNEDKKSRLSKLQELAGQLYDLWDLMDAPMQERSMFDHVTCNRSAS VDKVTAPGALALDLIEQAEVEVQRLDQLKYSKMKEIAFKKQTELEDIYAGAHMVIDTA AAHEKILALIEAGNIEPSELIADMESQISKAKEEALSRKEILDKVERWMSACEEESWL EDYNRDDNRYNSSRGAHLNLKRAEKARILVNKIPALVETLVAKTRAWEESRGLSFMYD GVPLLAMLDEYVMLRQEREEDKKRMREQKRYIEQQLNTDHEGPFGSRVSPNRPVSAKK VPGAKSNGSANGTPPNRRLSVSGHQNGRSGGKDGKRDSAKTASPGNVAAAKEDASSHI SGTDPVPSTP</aaseq>

Gene Sequence

<dnaseqindica>3794..4096#3309..3457#3026..3113#2589..2900#2342..2497#1895..2110#1543..1800#1108..1311#955..999#agcaacagcaacagcccagtactactagcaccgagacgagacgagagagagacggtcgccctcccagtccagtacagtgactcactctcactccagactcctccctctctctctcgtctctctcctgccggcggcgccgtggcggcgagcggcggagcactaggggaggagggggctcgtgctcgtctgtcgctgggtgtgtcgggggcgccgcggatcactctgcctcgagctgcgcgctcgcattccgctccttcgatctgggtgagttttttttttttttggggtgtgctttgacgcttgtgccgtctcgtcgtcgtgggcggcggcggtgcggctgctggatggattgatggatggatgccgagatctcgagtggctgggcgtaatgcgggcggggtttttttgccgtgggtgggggtgcgggtgtgggtttgggggggagttttgggcggcagtgggggtgggttgtgtgggggatccgcttctgcttcgggggtttgctgttgatctgcttgtttgtgaggtttgctccttccatgtgtgctcagatcgtgacgttttggatggaattattgcttggtcaaatatggtcaattggtgaaaagcattcgggtttagcattttttggtgtgggattggtggggtttggggatttcttcatgggtttaagcttaatcttagctgtaggatcctcataaagtataggcctaggtcttcattattggcaatgatggggggtcggatcttagtgttaccatgacttgtatagctgctaatttaactactattaagtcttgcatgcgatgcatggcagatttaatggctaactgtagagttggtgccaatcgaatttggaagtgcatttggtgctaattcttgttagtaggctgatctgggatgtacccatcatgtactaactctctgcttcctgacaggttcatctgttctgagatggctggcgacattacgtgtggatccttgctgcagaaactgcaggtgcgtgattgatttgttgcttgtgcttttgcgatccgcgtctagtttatgcatttgtgccttgctttgtgttgtgatagtggtgtgcttctgttcttaaaactgcagttgatatgggatgaagttggtgagagcgacgaggaccgcgacaaggtcctgtaccagttagatcaggagtgcctggatgtttacaagaggaaagttgaccaggccaccgactctagggatctccttatccaggcgctggatgactcgaagattgagctggccagacttttatctgctctaggagagaaggccatagcaagaactgtaagtgagcattatcatcacattgaatagtcatttgttcgatgcaacgtgagtggctcagcggaggacaattggtggtgcaagttgcaacttacttgtcctaaataatgtcttctccgttaagtttggtgttgtagcttagaagtcaggcaatacctcgttctgaatgtttagtttcttgttttcattattataacttgaagtaaaaacaagagtgctcgatgcatgcagcctgagaagacgtctgggacaatcaagcaacaacttgctgctatagcgccaacactcgagaagttgaacaagcagaaaaacgaaagagtgcgggaatttgttaatgttcagtcacaaattgatcaaatatgtggtgagattgctggcactacggaggtgggtgagaaggtggcaacgccacaagttaatgaggatgatttgacacttgagaggcttgaagaatttcgttcacaactacaggagctcgaaaaagagaaggtacatgtaacctgtataatttcttcatttggtgctagctgtgatgcctgaccattgctgacaagatttggttcccttgggaattggtttgcagagcaataggttggagaaggttcttgattatgtgagcatgatacataatctctgtactgtcttagggatggattttcttagcacagtgactgaagttcatcccagtttggatgactctattggtgacaactgcaagagcattagcaatgatacactgtcaaaacttgacaagactgtagccacacttaatgaagacaaaaagtcaagactaagcaaggtaaagaacatttttaaatccttactgaaattgaatcatactctatttgcagtatttctttttttatgctttcaatagaagcagggcctttcaggcctttgatctatacaaatttgctgggtttttttttcttgattcttgtaatatgtttcatcattgttcttgtcttattgaaatatgactactctttgcatggacaatagcatctaatggcttgcttcttgttctcagcttcaagagcttgctggtcaactctacgatctttgggatctcatggatgcccccatgcaagaaaggagcatgtttgatcatgtcacctgcaacagatcagcctctgtagacaaagtcactgcacctggagctcttgccctggatctcattgagcaagtgagattaaacagtaaatcttttttggtgcaattactgtctgacactaatccttccactgcatttgactttctgtttccaaattgttcaggctgaggtagaggttcaaaggctagaccagctaaaatacagcaagatgaaggaaatagctttcaagaagcaaactgagttggaagacatctatgctggtgctcacatggtaatagatacagctgctgcccatgaaaaaatattggcgctgattgaggcagggaacatagaaccatcagaattgattgcagatatggaaagccagatatcaaaagcaaaggaagaagcattgagtagaaaagaaatattagacaaagttgaaagatggatgtctgcttgtgaagaagaaagctggcttgaagattataaccgggtaagatgatattttgttgtagcaaatcaaaagtattacatcttttattctttcatgatttaagtgatattaccaaattattctgtttttaaatagcctatcatgaattgaaaatccttctgcaggatgacaacagatataactcaagccgaggtgcccacctgaatctcaaacgtgctgaaaaggctcggattcttgtcaacaagattccaggtatgtttggatgacagcaatggaaacctctcacttagtcagttgcaaattttttcatacctaggaacactatatatgtccatggggcttattattttactgtaccgttcatttttgttttgagtaaatttatgaattctgctaatcatatgctttgttagtgtttggctaatgtaatgaatggttttattctagcacttgttgaaactctggtggcaaagaccagggcatgggaggagagccgtggtctgtcctttatgtatgatggtgtacctcttctagctatgttggatgaatatgtcatgctaaggcaggaaagggaagaagataagaaaagaatgagggtgagtgccacttcctctttaaatgttgaatccattttcttgaacacgtatcacccttgagcgttgatcgaattcttttaaatctcgtgttgagtcatgtctctttttggtgatgaattatgtcagtattttcaagtcacaaaacaccaaaaaatatgttctgcagacagcatttaggtgaaaattgcatatgactaatccatgcattgtatagattggtattgtgagggaataaatagaaattgtaacagactaacagcacgattgcttttcacagcaatttccgttttgctaacacttcattttatatgttgctcacctgtgttcacatcccaggaacaaaagcgctacatcgagcaacaactgaacaccgaccatgaagggccatttggttcacgtgtgagccctaacagaccagtcagtgcaaagaaggtacctggtgcaaaatcaaatggcagtgctaatggcactcctccgaataggagactttcggtcagcggtcaccagaacggaaggtctggaggaaaggatggcaagagggactctgccaagacagcttcccccgggaatgtagcagctgctaaggaagatgcatcctcacacatttctggcaccgatccggttccgagcacaccatgatctttaaccttatggtatattagataaagagaggacagtttctgatgtttccattgatttgtggctatataatgtattgtgtttgtagcgaggagtaattatataacgtccatccttcaggcaggatcttttgcttctgtggagtaagtggagttcaacttttgattagttccctcagctgtactatttccccttctcatcagactctgtagtatagcctttgctggtatgtattactattcgttaacctgtttgctacatgtacaagttcttggaatgcctttcccctgccc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0308300, RefSeq:Os06g0308300