Os06g0320900

From RiceWiki
Revision as of 09:16, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0320900| Description = Chaperonin Cpn60/TCP-1 family protein| Version = NM_001187828.1 GI:297724786 GeneID:9270771| Length = 4770 bp| Defi...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0320900

Description

Chaperonin Cpn60/TCP-1 family protein

Version

NM_001187828.1 GI:297724786 GeneID:9270771

Length

4770 bp

Definition

Oryza sativa Japonica Group Os06g0320900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:12539714..12544483

Sequence Coding Region

12541702..12542004,12543995..12544348

Expression

GEO Profiles:Os06g0320900

Genome Context

<gbrowseImage1> name=NC_008399:12539714..12544483 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:12539714..12544483 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggtggcggcggcggagcagagcgcggagcagttcaggggccaggcgaagctcctgttcctccccgtcgccgacgctgtcccccgcctttcctccttccgtccacctgccaccgacgccgccacccctggcagtgactcctcctacccgacgccgacgtcgattcccccgccgccaacgtcactgccatcgacacctactcctgtggcagtgtggaggactgttgcttccgttgataatgcatccccgccatcgcgcctcagatcggggacaccgacggccctcatgccgaccgcgccgctgcgcctccagatcgacgctgccgacgcccatcacacgcaccaccaggttcctggaggtattatgagaggtttcttcctaatggtgttgtcttcgagaagacatttttcctatgctggatttgagcaacaaccaaagaagttcgtaagtccaaagattcgtttgctaaacattgaacaagaactgaaatatgaaaaagaaaatgcagaaatcaggtatgctagcagaatccaagcactatcagtgttacctttatgtgtagtcatatttaaatgcaccctcggttcttcccctatttctaactgtattcttattttatctaggttgtctgatcctctacaatgccaataa</cdnaseq>

Protein Sequence

<aaseq>MAAVAAAEQSAEQFRGQAKLLFLPVADAVPRLSSFRPPATDAAT PGSDSSYPTPTSIPPPPTSLPSTPTPVAVWRTVASVDNASPPSRLRSGTPTALMPTAP LRLQIDAADAHHTHHQVPGGIMRGFFLMVLSSRRHFSYAGFEQQPKKFVSPKIRLLNI EQELKYEKENAEIRYASRIQALSVLPLCVVIFKCTLGSSPISNCILILSRLSDPLQCQ </aaseq>

Gene Sequence

<dnaseqindica>2480..2782#136..489#ggcgcagatcgcgcaactccccttcaaaaaaaaaaaaaaactgcaaaatctcaatgaatctttcgccgtctccgaggcttgcacaactcttcttcctcatcttccgcggcggcggcggcggcgccggcgacggccatggcggcggtggcggcggcggagcagagcgcggagcagttcaggggccaggcgaagctcctgttcctccccgtcgccgacgctgtcccccgcctttcctccttccgtccacctgccaccgacgccgccacccctggcagtgactcctcctacccgacgccgacgtcgattcccccgccgccaacgtcactgccatcgacacctactcctgtggcagtgtggaggactgttgcttccgttgataatgcatccccgccatcgcgcctcagatcggggacaccgacggccctcatgccgaccgcgccgctgcgcctccagatcgacgctgccgacgcccatcacacgcaccaccaggtaatcgtcgtgccgcgccgcatcccgcccctccgccgtcgtcgcatcccgcgaccccggcggctactccgctgcaacccctgtgcggcaggcgaccccgatggctcctctcgtcaccaccaccgctgtcttctcccattgtataggtatccaaactgagattgcttgatccagtgattgctagagtgttgattgatgaatggcattttgtttggatgtgtgtattgctgtaattgtgtgctgatgatttcatagggtagattatgaataatgtcgatttatgttggtataacacaaatttttgacttctgaccttgggtaggaacagtaccctgtggatgccattcatcatatttacaactgtctttgaatatgccacgtcttttcttgcatacaaaatcttatagagagttttgtagtgctcaatttttcacttcttttatgtttgtgagaataaatagtttagaggattatgggtcggaattatattattttttatttgtttctctgtttgccactgtaccacctatgcatgattaagtacttatctaatctgttaatgtacagtcaaaatgatgtgtagcgtttatgtaataatcgagtccatatacaggagatcaatatatatttctcggttttggcgatgtatagatagatcctatatttcttggcagcaatcatctgtttgtcttgccttcttcctcacactccacatgtaaatgtcttgattttagtgtgctaggtgctcaatgaaattcccatgtgaacaaatttctgtttttgtctatcaggctatgtgttcatcaaagagaacaaagggaagttagaaattagaaatagtacagttcctatatctagcaggtgtgatcttcatttattatttcattctttgatctctattgtaaagggttgcatcgccacatttgcataaagcgaaatgtgcactgcagtatgtagttaagtgcttttgagcaatttattattatttaggctttactttgaatgccaacaaacctacagctgtatcatggctgatatcaccaacaaattactgctgccaaactacaggagaacaatagatgataagctgttccaaagaaaggttagctagcaagtcaattacatgattaacaatacttattactgatttgcagattaattgatacataggttgtcattatttctttgctgtgtatggaaacagaggaatgcccatacgctccggccatctctactatatctgggatccccatcgcgctcctccattcgtctccacagcttctcgcccctcccaacccaatctctaatcatctgaatgcgcgagggtggaagccaagttggagaaacgggaaagggaggacgatgacagggaagttgtcgttccatgtcgacgagtgacaagctgaccgatgcattccgccagctcggcaaggctttcaatccctaggtaccgcaccgaccatcaatcgctactacatctggtctgggggaattttttctccagtactcgagtatttctttagctttgattctagcaagcacatgcggttgaccggttcgaaagaaggatcccatgtgggtttatgtggcataggaaggcagtcaatatgctgttctgaatatgtttgagatgggattccatcatctctccattttgatacacttttcggcctcttaaatcagggttagactcaataaatacaatgtgttaattatctaccgtgtaatttgaaggtaacaagactaattcacttcttcatacactgatacaattccttttttaccaaacatggtaaacttgttagctcctgatgatatagaaaaatatatagttagtctattgtattttctcatactaggaggtataatagatcaacaagtttaccttaatgatgaaattttccatgtttttgcttcatattattcagtagatgtttaacaactaaatttcattagaaattatgatgtctgaattttggactaatattaggttcctggaggtattatgagaggtttcttcctaatggtgttgtcttcgagaagacatttttcctatgctggatttgagcaacaaccaaagaagttcgtaagtccaaagattcgtttgctaaacattgaacaagaactgaaatatgaaaaagaaaatgcagaaatcaggtatgctagcagaatccaagcactatcagtgttacctttatgtgtagtcatatttaaatgcaccctcggttcttcccctatttctaactgtattcttattttatctaggttgtctgatcctctacaatgccaataaatctttgatgctgaatggaatatgatttatgacaaagttggataaatgtgtgaaaaagtggggcaaaaacagtcctttctcggttggcaattggtggtcttgcaacataggtatgcatccagttgcaactcattcttttatccagtattttttgcagatgacgatattttcgtgctgtttgtattactcttcagacatcaatgaataatggcattgatgaggtaaccatgtttgttttcatgtttttaggttatagattgaactgagtcgtaagtatggtgttgatagctattttggcaacaaataagctcaactatagtgatcctttctgttgaaaaggaacttgttttttttgcgaattttttgaggtaaggcaagtgggcaatgaatggttcaaatattcagtggttgtcctggtcaaacagcaagcatagtcctttgtgacagtggtttgttgttacagagatttgcacttgtccttttgaatgctggagctgcagtctgcaccttcttaaggtgatagctctatgccctggtttcttgagatgtaagaaaatttgttctatagccgtcagttattattgcactgaattgcatttattggagacccacctgattaaagactgtgatgagcaacacacatctttttttcggtcttgtatgattggtcagatgctaattgaagctttgtttttttttcatgagacataattgaagatttgttgtgctgctgcatgtctacaaaacatagaatataaatttataaatgggacgagcaaaatgcctatgctttgctatgggtagaagaaaatattctaatttgtcatagcaaaattttttaatcaaatatgttagtatcacttgattatattagttcatgcttttactccaaatagtagtacattatcttagtattttacattttaatattaattgtataagtttctaaaaaacaccaaactcggttggtatagccgtataggtgactcaaagcaacttaaattgagaattcaatctttatccatgtataaaagaaacaatgtgtcctataaagtataacacacttggtttgtatttctatcctgtcgtaaaaagagacataagttctagctactactccctccgtcccaaaatgtagctatttctagcacagtgtctcgtcccaaaatgaaactatttcttcacctacctcctcctctcaaccaatcacaaccattcttcttcacctactttctcttttcaaccaatcacacacttcctccaatcattctcacatactttcttaatacccgtgccaacctcaaaaatggcttcattttgggacagaggaagtatttttgtttaatcatgaaatagaacctttctgagggccaagcaagccaaatgggactgcaccagtggtaagatgaaagtttttccttattcacatcaactatctgatttgcatttatttttgttcatagagattaaatttgttccaagagagtgcaaaatctgtcatgtagcatttatcgttcgacaacatataagttggatccgaatagatgatttagatcttttctttcactactctgctttggagcaaataaatatttttcgtcatcttgttttgtttgtgctatgacgaagtgtattatcttcttgattttcttacttgcagtgtcctattgttgttaagggcgacaacactcttgcatggatgatggttcaatggaaaaattaggaattgcagcaccgacaaaagttcacctattgcactggtgcaattttgtaattaagatattgtcccatgatgaaatgcatgtttgtactgtgtgacgattttaaattaaatgtattaccatgttaatagtaatgtagtattaagggttgattaattatttttgtttgaaaagtttagcctaggtttggtaaattgaaatttaccatgttactatgacatgtatgagaatttacagattattttttgggccaaatatattacaata</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0320900, RefSeq:Os06g0320900