Os06g0328400

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Revision as of 09:17, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0328400| Description = Conserved hypothetical protein| Version = NM_001187834.1 GI:297724798 GeneID:9270378| Length = 2589 bp| Definition ...")
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Gene Name

Os06g0328400

Description

Conserved hypothetical protein

Version

NM_001187834.1 GI:297724798 GeneID:9270378

Length

2589 bp

Definition

Oryza sativa Japonica Group Os06g0328400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:12999780..13002368

Sequence Coding Region

13000036..13001174,13001262..13001997

Expression

GEO Profiles:Os06g0328400

Genome Context

<gbrowseImage1> name=NC_008399:12999780..13002368 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:12999780..13002368 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cagcaacagcgccgacggctacctcgtcaaccagaccggccgcgtcttcttctccacccccttcaccctctggtcgccggcggctggtggtgggggcaatggcaatggcaatggcacctatgtcgcgtcgttcaacatggtgttcagggtgaacatattccggacgaacaccagcgaccccggcgagggcgtcgcgttcgtcgtggcgtccgggctcgacccgccgcctcccggcagctacagcggcttcctcggcctcacgaacgcgtccaccgacggcgacgacgcgaaccggttcgtggccttggagctcgacacggtgaagcaggggtacgaccccgacgacaaccatgtcggcctcgacgtcaacggcgtccggtcggtgaaggccgtgccgctggcgccgttcggcatcaagctcggcgccgccaacgccagcaacttcttcgtctgggtcgactacgatggcacgtctcgccacgtgtggatgtacatggccaggtccgacgacggcgtgcccagccccaagccgccgtcgccggtgctcgacgcgccgctcgacctctccgcgttcgtcgccgagaaggcctacttcggcttctccgcgtcgacgggcacgcggttccagctcaactgcctgcacatgtggaacatgacggtggagctgctcgacgacggcagccgctcctccggcggcggccagacgcggcggaagctggggctgggcgtcggcgtgccgtgcggcgtcgccgcgctcgccaccggcgctgtggtggcgttcctgtacatcaagaagaggaggcgcagagtcggcgacgatccggagtcgctgtcgtcgacggcggcgttcaagttcaacaagagcagcatcaacctgaggagcctcgccgggacgcccaaggagttcgagtacacggagctgaggaaggggacggaggacttcgccgcgaagaacaagctcggccagggtggctacggcgtggtgtacaaggccgtcgtcgccggcgacagcgacggcgagagcgtggaggtggccgtcaagcagttctcggcggccaacaccaagggccaggaggacttcctcgccgagctcagcatcatcaaccgcctccgccaccgcaacctcgtccgccttcgcgggtggtgccatcagaacggcgtgctgctgctggtgtacgactacatgccgaacggcagcctggacaagcacctcttcggcggcgcggcggtggcgccggtgctgagctgggagcagaggtacaacatcgtcgccggcgtggcggcggcgctgaactacctccaccacgagtacgaccagcgggtaatccaccgcgacatcaagccgtcgaacatcatgctcgactccgccttcggcgcccgcctcggcgacttcggcctcgcccgcgccctcgactccgacaagacctcctacaccgagatggtgggcgtgccggggacgatgggctacatcgcgccggagtgcttccacaccggccgcgccacgcgggagtccgacgtgttcggcctcggcgccgtgctcctcgaggtcgcctgcggccgccgcgtctcgttcggcgccggcggcgacggcggcgccatcggcgggtgcagccagctgctggagtgggtgtggaggctccacggggccggccgcatcctcgacgccgtggacccgaagctcgccggcggcgcgttcgacgcggacgacgccgaccggctcctcctcctggggctcgcgtgcagccacccggaccccggggcgcggcccaccgcgaaggccgtcgtgcaggtgctcgcgcgcgccgtgcccgcgccggccgtgccgccgtccaagccggcgttcatgtggcccgcgctgtcgggggcggactgtga</cdnaseq>

Protein Sequence

<aaseq>QQQRRRLPRQPDRPRLLLHPLHPLVAGGWWWGQWQWQWHLCRVV QHGVQGEHIPDEHQRPRRGRRVRRGVRARPAASRQLQRLPRPHERVHRRRRREPVRGL GARHGEAGVRPRRQPCRPRRQRRPVGEGRAAGAVRHQARRRQRQQLLRLGRLRWHVSP RVDVHGQVRRRRAQPQAAVAGARRAARPLRVRRREGLLRLLRVDGHAVPAQLPAHVEH DGGAARRRQPLLRRRPDAAEAGAGRRRAVRRRRARHRRCGGVPVHQEEEAQSRRRSGV AVVDGGVQVQQEQHQPEEPRRDAQGVRVHGAEEGDGGLRREEQARPGWLRRGVQGRRR RRQRRRERGGGRQAVLGGQHQGPGGLPRRAQHHQPPPPPQPRPPSRVVPSERRAAAGV RLHAERQPGQAPLRRRGGGAGAELGAEVQHRRRRGGGAELPPPRVRPAGNPPRHQAVE HHARLRLRRPPRRLRPRPRPRLRQDLLHRDGGRAGDDGLHRAGVLPHRPRHAGVRRVR PRRRAPRGRLRPPRLVRRRRRRRRHRRVQPAAGVGVEAPRGRPHPRRRGPEARRRRVR RGRRRPAPPPGARVQPPGPRGAAHREGRRAGARARRARAGRAAVQAGVHVARAVGGGL </aaseq>

Gene Sequence

<dnaseqindica>257..1395#1483..2218#actcccagcagagcaaacaccactccatgtccatggcactgcatcaaacccttctcctcctcctcttcgtctccatcgccatccaccgcgccgtcgcccagaccaccacctccaccgctgtccgcggcgacggcaaccggttcgtgacctactccttccccagcttcgccaacgcgctgctccacctgcaggccaacctcacggtgctcaacaacgccagcatcagccagggcgccctccagatcacccccgatagcagcaacagcgccgacggctacctcgtcaaccagaccggccgcgtcttcttctccacccccttcaccctctggtcgccggcggctggtggtgggggcaatggcaatggcaatggcacctatgtcgcgtcgttcaacatggtgttcagggtgaacatattccggacgaacaccagcgaccccggcgagggcgtcgcgttcgtcgtggcgtccgggctcgacccgccgcctcccggcagctacagcggcttcctcggcctcacgaacgcgtccaccgacggcgacgacgcgaaccggttcgtggccttggagctcgacacggtgaagcaggggtacgaccccgacgacaaccatgtcggcctcgacgtcaacggcgtccggtcggtgaaggccgtgccgctggcgccgttcggcatcaagctcggcgccgccaacgccagcaacttcttcgtctgggtcgactacgatggcacgtctcgccacgtgtggatgtacatggccaggtccgacgacggcgtgcccagccccaagccgccgtcgccggtgctcgacgcgccgctcgacctctccgcgttcgtcgccgagaaggcctacttcggcttctccgcgtcgacgggcacgcggttccagctcaactgcctgcacatgtggaacatgacggtggagctgctcgacgacggcagccgctcctccggcggcggccagacgcggcggaagctggggctgggcgtcggcgtgccgtgcggcgtcgccgcgctcgccaccggcgctgtggtggcgttcctgtacatcaagaagaggaggcgcagagtcggcgacgatccggagtcgctgtcgtcgacggcggcgttcaagttcaacaagagcagcatcaacctgaggagcctcgccgggacgcccaaggagttcgagtacacggagctgaggaaggggacggaggacttcgccgcgaagaacaagctcggccagggtggctacggcgtggtgtacaaggccgtcgtcgccggcgacagcgacggcgagagcgtggaggtggccgtcaagcagttctcggcggccaacaccaagggccaggaggacttcctcgccgagctcagcatcatcaaccgcctccgccaccgcaacctcgtccgccttcgcggtgagtgacaaattctcccttgccggagtcggagaagacgagacggctggcttagcttgtgttcatggtgatcgtgttcgagtacagggtggtgccatcagaacggcgtgctgctgctggtgtacgactacatgccgaacggcagcctggacaagcacctcttcggcggcgcggcggtggcgccggtgctgagctgggagcagaggtacaacatcgtcgccggcgtggcggcggcgctgaactacctccaccacgagtacgaccagcgggtaatccaccgcgacatcaagccgtcgaacatcatgctcgactccgccttcggcgcccgcctcggcgacttcggcctcgcccgcgccctcgactccgacaagacctcctacaccgagatggtgggcgtgccggggacgatgggctacatcgcgccggagtgcttccacaccggccgcgccacgcgggagtccgacgtgttcggcctcggcgccgtgctcctcgaggtcgcctgcggccgccgcgtctcgttcggcgccggcggcgacggcggcgccatcggcgggtgcagccagctgctggagtgggtgtggaggctccacggggccggccgcatcctcgacgccgtggacccgaagctcgccggcggcgcgttcgacgcggacgacgccgaccggctcctcctcctggggctcgcgtgcagccacccggaccccggggcgcggcccaccgcgaaggccgtcgtgcaggtgctcgcgcgcgccgtgcccgcgccggccgtgccgccgtccaagccggcgttcatgtggcccgcgctgtcgggggcggactgtgacgacagcgacggcggcggcgccggcgagatgtcgtcgaggcactcggccaggacgaccagcacggaacagaccagctcgacgtactacgcgtcgtcgtcgtcctactcgtcccacggttgcacacgcacgcaggtgacgagcagcggtgacgccattgctgacgagacgaggtacatgtccattggttgatcttggatatccgggttccggacgggttcggtacggcggcgccattgttggacatgtgcatgtgcatattctattgtacagtgtgttagtgtcaagaataaatggttgaacttgaaattgatatgtttatcagccaaaatttttaatcttaaatttaaaactgattttgagattttttttt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0328400, RefSeq:Os06g0328400