Os06g0334300

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Revision as of 09:17, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0334300| Description = Similar to Resistance protein candidate (Fragment)| Version = NM_001064085.1 GI:115467901 GeneID:4340933| Length = 4...")
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Gene Name

Os06g0334300

Description

Similar to Resistance protein candidate (Fragment)

Version

NM_001064085.1 GI:115467901 GeneID:4340933

Length

4150 bp

Definition

Oryza sativa Japonica Group Os06g0334300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:13365088..13369237

Sequence Coding Region

13365366..13365407,13366408..13368945

Expression

GEO Profiles:Os06g0334300

Genome Context

<gbrowseImage1> name=NC_008399:13365088..13369237 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:13365088..13369237 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcccgccgcgcggcgctccggcggacggcttacggaggaggtgaacatgatggtggctctgtccgggaggaagaggaggctgcaagccgcaaccatggtggctttgtgtttcttgtcatccatttgcgtttccacagcgcaattcaagcctgccgacaactacctggtggactgcggatcctccaagagcacgacgctcggcacgaggacctttgcggctgacggggctgccccggtgaaggtggacacctccctggaaatccttgccggcacgtcggcgaatggggttgcgtcattcgataactcggcgctttaccagaccgcccgcatcttcacgagcccttcatcgtatactttcccgatccagaagcagggccggcattttgttcgtctctacttcttcgcctttgcctaccagagctatgatctttccactgccaagttcaccgtgtcgacccaagaaatgctcttgcttagtgacttccaacagccagacaagactgcgccattgttcaaggaatactctttgaacatcacccaagacaagctcattatttccttcaagccatcgaatggaatcgcattcatcaatgcgattgaagtggtttcagtcccagatgatctcataggtgatagtgccccgatggtcaaccctatgcagcagtacagcggtttatctacacaaccattggaaacagtgtaccgtgttaacatgggtggaccaaaggtcactgcagacaatgataccctctccaggacctgggtcactgacaaaaagtatttagtgaacccatctgtgactagagaggttaatggggggaaggtcaattatatgaaaggtggaggatcaacaccgctgattgctcctgatattgtttatagcacagctacagaattggcagcttcgaatacaacgaacgcacttttcaacatgacatggcagtttgatgtggattcaggtttcagctacttgataagatttcacttctgtgatatagtcagcaaggcacttaaccaactctatttcaatgcatatgttggcagcttctatgcgcagcatgatattgatctctcaattcaatcaatgaatcagttggctacagctatctatttggatgtggttctttcatcaaatgatgcatctaacaagctcagcatcagtattggtccatccactttgaacaatgcattaccagatgggattctgaatggtcttgaggtcatgaagatgagcagtggctcaggttctgctttcactgttggatcatctggttcaaacaagaatttaggtgtgattattgggtcagtccttggagctgttggtattctgataattgtccttgtcatagtacttctttgccgaaagaaaaagactctggagaagcagcactcaaagacttggatgcctttctctatcaatgggctcacctctctcagtacaggaagtagaacttcttatggtactactctcacatcagggctgaatggaagctatggataccgatttgcctttagcgtgctccaagaagcaacaaacaattttgatgagaactgggttattggcgttggaggttttgggaaggtctacaaaggtgtgctgagggatgacaccaaggttgcagtgaagcgagggaacccgaagtctcagcaaggtctcaatgagttccgtacagagatcgaactcctttcacggctgcggcaccgccatctggtgtccctgattgggtattgtgatgaaaggaatgagatgatcttggtctatgaatatatggaaaaagggactctgaaaagccacctgtatggctcggataacccctcactcaactggaagcagcggttggagatttgcattggagcagcaaggggacttcactaccttcataccggttctgcgaaggctattatccaccgtgatgtcaagtctgcaaacatcttgcttgatgagaatctcctagcaaaggttgctgactttgggctatcaaagactgggcctgagttggaccaaactcatgtcagtactgcagtgaagggtagctttgggtatcttgaccctgaatatttccgaaggcagcaactgactgagaagtcagatgtctactccttcggtgttgttttgctcgaggtgctttgcgcaaggccagtgattgaccctacgctcccaagggagatggtgaatttggcagagtgggggatgaaatggcagaagagaggagagctgcatcagatcgtcgatcagcgagtttctggttcaatcaggccggattctctgaggaagtttggcgaaacagtggagaaatgcctggcggactacggtgtggagcggccatccatgggagatgtcctgtggaacttggagtacgtcctgcagctccaggatgcagattcatcgacagtatcagatgtaaacagcatgaacaggattgtcgaactcccgtcgcaagtccagaacatcggcgccctcgagagcatcagcgtgacaatggcggaagctggagcttcacatgagcctgatcatgacctctccgacgtttccatgagcagggtgttctctcagctaatcaaagctgagggaaggtga</cdnaseq>

Protein Sequence

<aaseq>MPAARRSGGRLTEEVNMMVALSGRKRRLQAATMVALCFLSSICV STAQFKPADNYLVDCGSSKSTTLGTRTFAADGAAPVKVDTSLEILAGTSANGVASFDN SALYQTARIFTSPSSYTFPIQKQGRHFVRLYFFAFAYQSYDLSTAKFTVSTQEMLLLS DFQQPDKTAPLFKEYSLNITQDKLIISFKPSNGIAFINAIEVVSVPDDLIGDSAPMVN PMQQYSGLSTQPLETVYRVNMGGPKVTADNDTLSRTWVTDKKYLVNPSVTREVNGGKV NYMKGGGSTPLIAPDIVYSTATELAASNTTNALFNMTWQFDVDSGFSYLIRFHFCDIV SKALNQLYFNAYVGSFYAQHDIDLSIQSMNQLATAIYLDVVLSSNDASNKLSISIGPS TLNNALPDGILNGLEVMKMSSGSGSAFTVGSSGSNKNLGVIIGSVLGAVGILIIVLVI VLLCRKKKTLEKQHSKTWMPFSINGLTSLSTGSRTSYGTTLTSGLNGSYGYRFAFSVL QEATNNFDENWVIGVGGFGKVYKGVLRDDTKVAVKRGNPKSQQGLNEFRTEIELLSRL RHRHLVSLIGYCDERNEMILVYEYMEKGTLKSHLYGSDNPSLNWKQRLEICIGAARGL HYLHTGSAKAIIHRDVKSANILLDENLLAKVADFGLSKTGPELDQTHVSTAVKGSFGY LDPEYFRRQQLTEKSDVYSFGVVLLEVLCARPVIDPTLPREMVNLAEWGMKWQKRGEL HQIVDQRVSGSIRPDSLRKFGETVEKCLADYGVERPSMGDVLWNLEYVLQLQDADSST VSDVNSMNRIVELPSQVQNIGALESISVTMAEAGASHEPDHDLSDVSMSRVFSQLIKA EGR</aaseq>

Gene Sequence

<dnaseqindica>279..320#1321..3858#acacggtgcccagccaaacacctccacctccacatctctctctcctctcccccaccctctctgccgttcgcttgctttgcttcccaaagcttggagctcgtccaccagcagcaagaagaaggagagctcccttttcgtaccacctcgccgcgtcggctgctccgaatggtggtcggtctccgccggcgcgtctgctgaccgaccgacccggcctgcccgcctgcctgctcggcgtacgttctccgagatcccaccggcggcgggatctcgccgcgggaatgcccgccgcgcggcgctccggcggacggcttacggaggaggtgcgcttctttctttcttttctttctttggcccccctcttcttctttgctgggtggaagcttttgctctccagatgagatcttcttggtttctgtctctgcttttctttttatatatatttttcttccgatggatgaactaatttttttactgtagattttttttttggcattctgattctggcgataactctagaaattgtttgagctaaaccaatctatgggatgctagtagtacaacgcaaagctcgtagtagttgaagaaaataatatttgcagtttcttagtattttctttttgtaggaatattattattactactattaaataataaaaatgaaatttaataaagcacctttgccagccttcttcttctactatctcctcctagccccatgtgcatgtggtggtagtccatgctctcctcatcgtcgacttcccccaaatccgccgccgccgcgcacaagcttcccctcctttcgccggagaagactctcgcctcctccgaatccgattcgtcgtctccactgctgtattggcgaggtggtgcggtggagatcgatccgtgtagccgacaggggtaaggacacaagcttttcttggatcgctctctttgccgtgagctctcaaatccgaaatcttcctctttcttggattgatggacgctgcggttcgtcctggcggtgtgaaatgcgtggctccgttcgtcgcttcaagatctcagcgtggtgcggtcccgtagtgtagtgcatcgatcgtgcgcccacgtggggtgattaggactggttcggttcttgatgcccgctgattcattcggtttcgatgttcttgattgatttgctttggttcctaaacattttacagatcctgcttacttgtgctgtctagattctgatgttcttgccatattttttgttagctctagttggaatgcatgggttgtagcttgcaattgtagctgccatctaaaacaatagtgctgatgctttttgtcattcaggtgaacatgatggtggctctgtccgggaggaagaggaggctgcaagccgcaaccatggtggctttgtgtttcttgtcatccatttgcgtttccacagcgcaattcaagcctgccgacaactacctggtggactgcggatcctccaagagcacgacgctcggcacgaggacctttgcggctgacggggctgccccggtgaaggtggacacctccctggaaatccttgccggcacgtcggcgaatggggttgcgtcattcgataactcggcgctttaccagaccgcccgcatcttcacgagcccttcatcgtatactttcccgatccagaagcagggccggcattttgttcgtctctacttcttcgcctttgcctaccagagctatgatctttccactgccaagttcaccgtgtcgacccaagaaatgctcttgcttagtgacttccaacagccagacaagactgcgccattgttcaaggaatactctttgaacatcacccaagacaagctcattatttccttcaagccatcgaatggaatcgcattcatcaatgcgattgaagtggtttcagtcccagatgatctcataggtgatagtgccccgatggtcaaccctatgcagcagtacagcggtttatctacacaaccattggaaacagtgtaccgtgttaacatgggtggaccaaaggtcactgcagacaatgataccctctccaggacctgggtcactgacaaaaagtatttagtgaacccatctgtgactagagaggttaatggggggaaggtcaattatatgaaaggtggaggatcaacaccgctgattgctcctgatattgtttatagcacagctacagaattggcagcttcgaatacaacgaacgcacttttcaacatgacatggcagtttgatgtggattcaggtttcagctacttgataagatttcacttctgtgatatagtcagcaaggcacttaaccaactctatttcaatgcatatgttggcagcttctatgcgcagcatgatattgatctctcaattcaatcaatgaatcagttggctacagctatctatttggatgtggttctttcatcaaatgatgcatctaacaagctcagcatcagtattggtccatccactttgaacaatgcattaccagatgggattctgaatggtcttgaggtcatgaagatgagcagtggctcaggttctgctttcactgttggatcatctggttcaaacaagaatttaggtgtgattattgggtcagtccttggagctgttggtattctgataattgtccttgtcatagtacttctttgccgaaagaaaaagactctggagaagcagcactcaaagacttggatgcctttctctatcaatgggctcacctctctcagtacaggaagtagaacttcttatggtactactctcacatcagggctgaatggaagctatggataccgatttgcctttagcgtgctccaagaagcaacaaacaattttgatgagaactgggttattggcgttggaggttttgggaaggtctacaaaggtgtgctgagggatgacaccaaggttgcagtgaagcgagggaacccgaagtctcagcaaggtctcaatgagttccgtacagagatcgaactcctttcacggctgcggcaccgccatctggtgtccctgattgggtattgtgatgaaaggaatgagatgatcttggtctatgaatatatggaaaaagggactctgaaaagccacctgtatggctcggataacccctcactcaactggaagcagcggttggagatttgcattggagcagcaaggggacttcactaccttcataccggttctgcgaaggctattatccaccgtgatgtcaagtctgcaaacatcttgcttgatgagaatctcctagcaaaggttgctgactttgggctatcaaagactgggcctgagttggaccaaactcatgtcagtactgcagtgaagggtagctttgggtatcttgaccctgaatatttccgaaggcagcaactgactgagaagtcagatgtctactccttcggtgttgttttgctcgaggtgctttgcgcaaggccagtgattgaccctacgctcccaagggagatggtgaatttggcagagtgggggatgaaatggcagaagagaggagagctgcatcagatcgtcgatcagcgagtttctggttcaatcaggccggattctctgaggaagtttggcgaaacagtggagaaatgcctggcggactacggtgtggagcggccatccatgggagatgtcctgtggaacttggagtacgtcctgcagctccaggatgcagattcatcgacagtatcagatgtaaacagcatgaacaggattgtcgaactcccgtcgcaagtccagaacatcggcgccctcgagagcatcagcgtgacaatggcggaagctggagcttcacatgagcctgatcatgacctctccgacgtttccatgagcagggtgttctctcagctaatcaaagctgagggaaggtgaaagacaaactgggtaatctgtagtgtactttgtagaagtgaggaagccctgaaagttgtttcttatttacttcagagatcatatgtaattgttctttctttttttctttctttccttctttctcatgctccatgttctactgaacgatgttttcaaatttgttatggccttattagccatcgtgagcagatagagcttttcttgttttgaatctattctgctctagaacagcgtgtactgctgccctggcaaaatgctggatctggatgtgtgatgttgttgagtagtttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0334300, RefSeq:Os06g0334300