Os06g0338700

From RiceWiki
Revision as of 09:17, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0338700| Description = Copper amine oxidase family protein| Version = NM_001064095.1 GI:115467921 GeneID:4340946| Length = 2543 bp| Defini...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0338700

Description

Copper amine oxidase family protein

Version

NM_001064095.1 GI:115467921 GeneID:4340946

Length

2543 bp

Definition

Oryza sativa Japonica Group Os06g0338700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:13566673..13569215

Sequence Coding Region

13566673..13567463,13568043..13568427,13568518..13568631,13568721..13569215

Expression

GEO Profiles:Os06g0338700

Genome Context

<gbrowseImage1> name=NC_008399:13566673..13569215 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:13566673..13569215 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtatccgcctctggttctggtccttgcaatcttcttcgccgtggccactgccatagcggccttgtcgagtcccctcccgcacccactcgacccactttctcccacggagctcacggcggtaaggtccgccgtcctcgccttctctctcgtcgcttcccgcccgatatcctttcactatgtcggcctcgatgagccggagaagcccgatgtcctctctcacaccaacgccgccgccgccgccatcctcccacgccgcgcgtttgtgatcgcccgagccggcggcctctcccatgagttttacgtcgatgtcaccaacacctccgctccccgtgtggtttcgcatggtattcacgatggccctggcttcccaatgttcacgaccgaggagcaggtggcggcgggacagctttcacgcgagtaccctcccttcagggaatccttgcagcgacgtgggctggccttgaccaatgtggggtgcggggtgttctccatgggatggtttggaaagaatgaggcgaggcggttggcgaaggtgcagtgcttcattgttgcaggcggcaccgccaattactatgcgcggccactggaaggcgtgacgctgctggtggatgtcgagaaactggttatcgttgcgtatagagatagggcagcgtactcggtgcccaaagctgaggggaccgactaccgcgccggcaaggctaggccaccgttcaacggagcggtgccggcgcctggcgtcgtggtgcagccggagggcaagggcttccacatagacgatcatattgtcaggtgggccaactgggagttccacgtgggttttgacatgcgagccggcacagtcatctctatggcttctgtccacgacgctgatgccgacctatggcggcgggttctctaccgcggtttcgcctcggagatcttcgtgccatatatggacccggaggaggagtggtacttccacacattcatggacgccggtgagtacggccttggcgtctcggctgtcccgctgcagcctgaggctgattacccagccaacgccgcctacatggatggttattacgtcgacgcggacggcaagccggtgaagtcggagaacatcatctgtgtgttcgagcggtacgccggcgatattgcatggcgccacaccggggtcgcgggaccaatcgcaccgatcacggaggtccggccagacgtgaccttggtggtgaggatggtggtgacggttggaaattatgactacacattggactgggagttcaaaaccgttggctccatcaagaccgtggtgtcccttagtggtatcttggagatgaaggcgacgaattacacacatgtcgaccagattagagatgacatacatggcacgctgattgccgagaacaccgtcggtgtctaccatgaccacttcattacctaccaccttgaccttgacattgatggtaccaagaactctttcatcaaaaataccatcattccaaaacgcaacacgggcgttcgtgcaaccggcggtgctcccacaccaaggagctactggacggtactctatgaggtggccgaaactgaggctgaaggccaggtgaacattaatggcgcacctgctgatctcctcttcgttaacccaagcaagaagacaaaagttggcaatgaggtcggttaccggctcattccagccggtgcgacggcaacatcattgttggccaacaacgactacccacagcgccgagcaagctacactaagaaacaggtgtgggttacgccatataacaagtcggagaagtag</cdnaseq>

Protein Sequence

<aaseq>MYPPLVLVLAIFFAVATAIAALSSPLPHPLDPLSPTELTAVRSA VLAFSLVASRPISFHYVGLDEPEKPDVLSHTNAAAAAILPRRAFVIARAGGLSHEFYV DVTNTSAPRVVSHGIHDGPGFPMFTTEEQVAAGQLSREYPPFRESLQRRGLALTNVGC GVFSMGWFGKNEARRLAKVQCFIVAGGTANYYARPLEGVTLLVDVEKLVIVAYRDRAA YSVPKAEGTDYRAGKARPPFNGAVPAPGVVVQPEGKGFHIDDHIVRWANWEFHVGFDM RAGTVISMASVHDADADLWRRVLYRGFASEIFVPYMDPEEEWYFHTFMDAGEYGLGVS AVPLQPEADYPANAAYMDGYYVDADGKPVKSENIICVFERYAGDIAWRHTGVAGPIAP ITEVRPDVTLVVRMVVTVGNYDYTLDWEFKTVGSIKTVVSLSGILEMKATNYTHVDQI RDDIHGTLIAENTVGVYHDHFITYHLDLDIDGTKNSFIKNTIIPKRNTGVRATGGAPT PRSYWTVLYEVAETEAEGQVNINGAPADLLFVNPSKKTKVGNEVGYRLIPAGATATSL LANNDYPQRRASYTKKQVWVTPYNKSEK</aaseq>

Gene Sequence

<dnaseqindica>1..791#1371..1755#1846..1959#2049..2543#atgtatccgcctctggttctggtccttgcaatcttcttcgccgtggccactgccatagcggccttgtcgagtcccctcccgcacccactcgacccactttctcccacggagctcacggcggtaaggtccgccgtcctcgccttctctctcgtcgcttcccgcccgatatcctttcactatgtcggcctcgatgagccggagaagcccgatgtcctctctcacaccaacgccgccgccgccgccatcctcccacgccgcgcgtttgtgatcgcccgagccggcggcctctcccatgagttttacgtcgatgtcaccaacacctccgctccccgtgtggtttcgcatggtattcacgatggccctggcttcccaatgttcacgaccgaggagcaggtggcggcgggacagctttcacgcgagtaccctcccttcagggaatccttgcagcgacgtgggctggccttgaccaatgtggggtgcggggtgttctccatgggatggtttggaaagaatgaggcgaggcggttggcgaaggtgcagtgcttcattgttgcaggcggcaccgccaattactatgcgcggccactggaaggcgtgacgctgctggtggatgtcgagaaactggttatcgttgcgtatagagatagggcagcgtactcggtgcccaaagctgaggggaccgactaccgcgccggcaaggctaggccaccgttcaacggagcggtgccggcgcctggcgtcgtggtgcagccggagggcaagggcttccacatagacgatcatattgtcaggtaagcccctccaatttgcatggggttgttacttgttacttgccacctctaaaactggtttacttcgcgtggttctatcgacaattccttgggagtaccaatgacagctgcccttggtcaaacggttgacaatattcagagagcaacttcccaacttaaataaattgcatgtattagcactgaaatatttgaccaaccggtttcagtaaacttttgggctcatgtctttcgacttttcgctatatagaatcttccatcaagattcgtcttcctgtaggcccaacttatagttgtacttagttatatagcacttatacttagcaatagaaaatttatgctcaattacaatggatttatacacagctacagtgaaaaaagattttacaactgttttttctctagatttatgatttttgacatatttatcccccttttttatcattttatttaaaacgggttgtatctattagtggaaaattttgcaagatttaaagctccaaatctatccataaatcaataggtagtacctttgacaaattgaactaattcatgagctacactgcttgagcgtgactgcaggtgggccaactgggagttccacgtgggttttgacatgcgagccggcacagtcatctctatggcttctgtccacgacgctgatgccgacctatggcggcgggttctctaccgcggtttcgcctcggagatcttcgtgccatatatggacccggaggaggagtggtacttccacacattcatggacgccggtgagtacggccttggcgtctcggctgtcccgctgcagcctgaggctgattacccagccaacgccgcctacatggatggttattacgtcgacgcggacggcaagccggtgaagtcggagaacatcatctgtgtgttcgagcggtacgccggcgatattgcatggcgccacaccggggtcgcgggaccaatcgcaccggtgatctaccatcgacccctcaagtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtataatactagatgatgtggctttcggtgcagatcacggaggtccggccagacgtgaccttggtggtgaggatggtggtgacggttggaaattatgactacacattggactgggagttcaaaaccgttggctccatcaagaccgtggtatataacaatcttctgtttgcttgccgtgtttaaagcaaattaaaggtaagaactaactcttgactcaattaacacacgtattgcaggtgtcccttagtggtatcttggagatgaaggcgacgaattacacacatgtcgaccagattagagatgacatacatggcacgctgattgccgagaacaccgtcggtgtctaccatgaccacttcattacctaccaccttgaccttgacattgatggtaccaagaactctttcatcaaaaataccatcattccaaaacgcaacacgggcgttcgtgcaaccggcggtgctcccacaccaaggagctactggacggtactctatgaggtggccgaaactgaggctgaaggccaggtgaacattaatggcgcacctgctgatctcctcttcgttaacccaagcaagaagacaaaagttggcaatgaggtcggttaccggctcattccagccggtgcgacggcaacatcattgttggccaacaacgactacccacagcgccgagcaagctacactaagaaacaggtgtgggttacgccatataacaagtcggagaagtag</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0338700, RefSeq:Os06g0338700