Os06g0354700

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Revision as of 09:18, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0354700| Description = Esterase/lipase/thioesterase domain containing protein| Version = NM_001064128.1 GI:115467987 GeneID:4340988| Length...")
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Gene Name

Os06g0354700

Description

Esterase/lipase/thioesterase domain containing protein

Version

NM_001064128.1 GI:115467987 GeneID:4340988

Length

4790 bp

Definition

Oryza sativa Japonica Group Os06g0354700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:14595017..14599806

Sequence Coding Region

14595472..14596122,14596551..14596777,14597325..14597516,14597598..14597754,14599064..14599297

Expression

GEO Profiles:Os06g0354700

Genome Context

<gbrowseImage1> name=NC_008399:14595017..14599806 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:14595017..14599806 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaagtggtttcttccagccactcctgcttggcatttaaccgaacacctagcagtgcttggaggtttccggggaatggtcttggtccagggcatgcaaagctcactcggccaagaagtgcaattctttgtgtgcggtcagggacagcttcgaatcctgctgattctgggaaagttcatgcgagccatgggttctatgtaagtgatgtcgatgcagctctccaagggatcccgaagaaagtcggtgagatcgagaagatgatcattccgagcttgccagaaggacctgaaagctctctaattagtactggtttctgggaatggaagccgaagctgagtgtatattatgaaaagtctggcatagacaatagcaaggcaccgtctgtgctctttctaccaggttttggagtgggaacgttccattttgagaagcaattgaaggatcttggccgtgattacaaagtatggacaatggattttctagggcagggcatgtcgttgccatgtgaagatcctgctcctaagagcacatcaggagagctagatgaggacacatattggggttttggacaagaattacaaccatgggcggaggagttggtgtattcgatagatttgtggcgtgaccaagttcagcattttattgaagaggttattggtgaaccagtatatattgtggggaactctctgggaggttttgtttctctatatcttgctgcatcctgtccacaccttgtaaagggtgtcacattacttaatgcaaccccattttggggattccttcccaaccctgctacatctcctcgcttgtcgaagatttttccatgggctgggacatttccacttccatcgtttgtgaggaaacttactgaaacagtgtggcagaaaataagtgatccaagaagtatacagggcatactcaagcaagtatatgctgaccactcaacgaatgtggacatggtgttctcgcgtattatagagacaacacaacatccagcagctgctgcatcatttgcatccattatgtgtgctccaaagggacaaatatccttcgaagaagctctatctaggtgccaaaggcagggtattcccatatctcttatgtatgggagagaagatccttgggttagacctatttggggtattaaagtgaaacagcaggtgccagaatcaccgtattacgaaatcagtcctgctggtcactgccctcatgatgaggttcctgaggttataaactacttactcagaggatggctaaagaatgtcgaatctgagggttcagttgcagttccatttcttgaagaacccagctatgctgaaaatggtgtatcaagggagctggaatttgttaggggaggatcaaaaaaatctgtccatgtgcgactctttggttctaaaatttccttatggagccaacttcgttcgcttttgaagtccaacacatgggtaatatctagataa</cdnaseq>

Protein Sequence

<aaseq>MEVVSSSHSCLAFNRTPSSAWRFPGNGLGPGHAKLTRPRSAILC VRSGTASNPADSGKVHASHGFYVSDVDAALQGIPKKVGEIEKMIIPSLPEGPESSLIS TGFWEWKPKLSVYYEKSGIDNSKAPSVLFLPGFGVGTFHFEKQLKDLGRDYKVWTMDF LGQGMSLPCEDPAPKSTSGELDEDTYWGFGQELQPWAEELVYSIDLWRDQVQHFIEEV IGEPVYIVGNSLGGFVSLYLAASCPHLVKGVTLLNATPFWGFLPNPATSPRLSKIFPW AGTFPLPSFVRKLTETVWQKISDPRSIQGILKQVYADHSTNVDMVFSRIIETTQHPAA AASFASIMCAPKGQISFEEALSRCQRQGIPISLMYGREDPWVRPIWGIKVKQQVPESP YYEISPAGHCPHDEVPEVINYLLRGWLKNVESEGSVAVPFLEEPSYAENGVSRELEFV RGGSKKSVHVRLFGSKISLWSQLRSLLKSNTWVISR</aaseq>

Gene Sequence

<dnaseqindica>456..1106#1535..1761#2309..2500#2582..2738#4048..4281#ttctgagctcgcagttctactagtttagtttttgcgaagtgttcttctccaaatcacctgagaaataggtgtcgattttcaggtatgattcaccgatttctcactaggagagagtaatctgtaattaggtgtttgctatgtctttttttcttcctggggactccctggcatgtgtgtactactcgtgcggggaacagttcccgggtttcgcatgaattgctggatttggaattggtttgctggctggtcgaagctcattttcgctgtgtagattagttttattctcgagaacttaacccatctgtttgatacagttaaaattttggtttcggttctcccgatcaaattaatctgaaggctgatagttcttggtttcagtttttcgagttcgctcttttaaacgtatctttcggtttatctgttgcagaactagcgtgctagccactagtgtggccatggaagtggtttcttccagccactcctgcttggcatttaaccgaacacctagcagtgcttggaggtttccggggaatggtcttggtccagggcatgcaaagctcactcggccaagaagtgcaattctttgtgtgcggtcagggacagcttcgaatcctgctgattctgggaaagttcatgcgagccatgggttctatgtaagtgatgtcgatgcagctctccaagggatcccgaagaaagtcggtgagatcgagaagatgatcattccgagcttgccagaaggacctgaaagctctctaattagtactggtttctgggaatggaagccgaagctgagtgtatattatgaaaagtctggcatagacaatagcaaggcaccgtctgtgctctttctaccaggttttggagtgggaacgttccattttgagaagcaattgaaggatcttggccgtgattacaaagtatggacaatggattttctagggcagggcatgtcgttgccatgtgaagatcctgctcctaagagcacatcaggagagctagatgaggacacatattggggttttggacaagaattacaaccatgggcggaggagttggtgtattcgatagatttgtggcgtgaccaagttcagcattttattgaagaggtacttctttcaactattttctgtgtagttttatgtttactttgctaaaaaaatatcatctttagttcacaaatcctagtatgctttgcactctttgaagggcctgcaataatagctatttattagttattgaagattcttgaatctcacaaacttcagcgtttcatattcggttaatagaatataagaaccgttatgttgcccaaagcaggtgccctgttttttggcacacacacttgtaacacattcttttattccagtatctagaatagagagcaaaggagccctgttcccaatctcatatagcaggtttgacatttgtgttattatgtgtaatgccaaagttcttaagtttacttatccataacagtcctaccatgagattcatatcatatgtttcttatgctaattttgtaaccttctttcaggttattggtgaaccagtatatattgtggggaactctctgggaggttttgtttctctatatcttgctgcatcctgtccacaccttgtaaagggtgtcacattacttaatgcaaccccattttggggattccttcccaaccctgctacatctcctcgcttgtcgaagatttttccatgggctgggacatttccacttccatcgtttgtgaggaaacttactgaaacagtgtatgtgctaccctttaggttttgggaaacacatgtgcatattgatattgaataatcttaaatttatcccttctgctaattattggtgtactattttttttcattataatgaatgcatggaatgcaaaagttttatgatacttgtagcaaggcatagcatctgtagattgctaccttttgttttgacagaaattgattgcatacttcaccagtgaagaaacgatttagactatgtttagtttgcatatggtactataagtatagctaataattgttttttcaaaaaaaaaacgtgtttttttataaaatcacacctagatataaagtatatttctgtatgtcattttctgccattatttttccttttacattgtcattcctctctcatgttaggatggtaggctgtgcaatgtattggtgttttaacagattaaacaagctgttattcaatagcaattgtgtggtccctgcatcatttagaactatgcaagttatccatgtggtgatataaatttggtggatctcatttaatatctttttggtgcaggtggcagaaaataagtgatccaagaagtatacagggcatactcaagcaagtatatgctgaccactcaacgaatgtggacatggtgttctcgcgtattatagagacaacacaacatccagcagctgctgcatcatttgcatccattatgtgtgctccaaagggacaaatatccttcgaagaagctctatctaggtaaactggatatactatttgatgaattgccatgttgcttacaaaatacgattttgtatttttacatttcataatctgcaggtgccaaaggcagggtattcccatatctcttatgtatgggagagaagatccttgggttagacctatttggggtattaaagtgaaacagcaggtgccagaatcaccgtattacgaaatcagtcctgctggtcactgccctcatgatgaggttcctgaggtaaaacattcattgtgtttggaaataaagctcgtcatatttagtttgtaccagatagttgatagttcattttgtagccgtgcattctgttttgggtggatactgtggctggtgggctgtgtgtgtttaagaaaggtcatgttctctgaatatcatccatgttgattacacataagaaactatggaacaaaaactggaggaaatttgtatcagtatctagtttgttttgaccaacatttgaaatctctatttaaatctagaaatttcggtatacaaccaatggccattatatgggactgcagccttagctatgagtttctacaaagataggcagctgtatcttagaagctaaatgctattagtggaatcagatctggatcagcacaacaggttgtcagatgctatctttaggtggggtaccagggaagcccaagaatcacaactgtttgcgaattcctcatgataggattttctgctagggcaatgaatatggattgtaccatttgtaagcttaacattttttctgcagtttttgtttaattctgtagcatgcatttgatacaaagacaccttggggcactaatttttttatggttgagtgtgtttaagttccctagttttctcctttgaagttacaagacattatatggttgaggttgtaggttccaggaaaaagccttgcctggtggatcactgggcgccttcaggcatcgtaaccccttggggcggtgcgagggtacctctcttcctcggcaagttttctctaggtgaaaaccacatctttgttagaaggtgggcgatggtgccgtccttgatggcgtgacctccgtggtggcatcgttttcgaagtctcgtctttgtggtgttgtcgtgggcctagcggcgatcagccacgcatagcgagggtcgttttggtgctaggcttcactcagtggtttgtgcttttgtggttagcgtgtggttttaggacgtgccctgtggtgcgcatccgtcctcgacagctttctgttgtgttttttcttgtaactttttctccttaatgcattcggatggcctcctttggccttcccggcgaaaaaaagtggcaagacatgttctatgttttttttctttccttttttaatctgtagagttagttcaattttctgcatttatataaagatatatgtttcacattttactcctcacatattcctatttttgagagtgccttcttctgtttaatcattcatgaaaactgcttaaggattgtctctgtgatgacaaaatatatatatgtcctttacatatgattttggtctttggacaggttataaactacttactcagaggatggctaaagaatgtcgaatctgagggttcagttgcagttccatttcttgaagaacccagctatgctgaaaatggtgtatcaagggagctggaatttgttaggggaggatcaaaaaaatctgtccatgtgcgactctttggttctaaaatttccttatggagccaacttcgttcgcttttgaagtccaacacatgggtaatatctagataagatagattgtccatacaagtatgatgttagaagcttcagtcaaatattgtattcattattctttatttaaagtagtcagtttgatgtctagaactctagatatacccagtagacaggattttgaacatttctagtggatgtaaaaatagcaagcttcaaaattcttgtgccagaacaaagggagtagccaagtttagtccttgtttgtataggctatcaatctttatcaagttcaaattgtgatttctgtataagcagaaaaattggtatcatatgccattgttataggatccacacttcactgtccttagaactttcagttctatatcaactcaggtgctttttttcaaaaaggtagaatggaccatgtggaattgtggattatgttgcggcttaatggataactcgtcattttgacaggtttaagttatgttagattgttaggtgcaattttgtcggaattgtagatccgccattgtgttaatatgtgaaagaaacagcgaaagtgg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0354700, RefSeq:Os06g0354700