Os06g0355500

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Revision as of 09:18, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0355500| Description = Bromodomain containing protein| Version = NM_001064129.1 GI:115467989 GeneID:4340989| Length = 5580 bp| Definition ...")
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Gene Name

Os06g0355500

Description

Bromodomain containing protein

Version

NM_001064129.1 GI:115467989 GeneID:4340989

Length

5580 bp

Definition

Oryza sativa Japonica Group Os06g0355500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:14652597..14658176

Sequence Coding Region

14653269..14654003,14654120..14654197,14654811..14655048,14655673..14655748,14656359..14656368

Expression

GEO Profiles:Os06g0355500

Genome Context

<gbrowseImage1> name=NC_008399:14652597..14658176 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:14652597..14658176 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaagcgcaagcgtgggcgtaagatgggcaagaagggcaagtcgaaagcttccaccacagcggatgcttctccaatgtccctgtccagcccgagcaccgtggatgcttcctcaaaatccccctccagcccaagcacagaggagaacggcaccagcccagcgcatcatcaggcagataatgcgcctgttattgctccgccaccagtgcctgaaccggcacctcctgagccggagaagccagccgtgtctactgacgtacagaatgctaagccaaaagtctatagccgagtcaggttgaagttcaaatctgccaaagtgttggagacgcaccagggtccttcagaagcaaaagcacctgttgatggtggtggtggtaaacctgcaagtgctgcgcctgaagcgagcaaagaagttgttgcggagaaggctattgtatcaccagacggacagaaagatgcgcaggcagcagaattgagtggttctgataaggataaggtggcaagaaaagtagcaagcataaagatcaagtctgtaggattatcttcggtagaagataaaaaccaggacaggaaagctgattcagtcagtgaacctcttccaagcaagcaggaaactgtattggaaaatgtagaaagcgagactgcattggagctgagaagctcacaagagttggaggtaaagcaggctacgccagaacgtcagcgagatgacagagagctaactgctgcacttgaagctattaagaaagtcatgaagatggatgcagctgagccgttcaacacaccggtggatcctgttgctctaggaatacctgattattttgatattattgatactcctatggattttggcacaatatgtcaaaatctagaacgtggtgataagtatatgaactcagaggatgtgtataaggacgtgcaatttatatgggataattgtaccaagtacaacagtaaaggtgattacattatagagcttatgaaacgggtgaagaagggcttcatgaaaaactggctggcagcaggcttgtattctgatgtgcaggagaatggtggcaatgataacacaggcgatgaggatgtcaaaggttcaaaaggcaagtctaagcaaaaacggcggcgcctagggaatgattga</cdnaseq>

Protein Sequence

<aaseq>MKRKRGRKMGKKGKSKASTTADASPMSLSSPSTVDASSKSPSSP STEENGTSPAHHQADNAPVIAPPPVPEPAPPEPEKPAVSTDVQNAKPKVYSRVRLKFK SAKVLETHQGPSEAKAPVDGGGGKPASAAPEASKEVVAEKAIVSPDGQKDAQAAELSG SDKDKVARKVASIKIKSVGLSSVEDKNQDRKADSVSEPLPSKQETVLENVESETALEL RSSQELEVKQATPERQRDDRELTAALEAIKKVMKMDAAEPFNTPVDPVALGIPDYFDI IDTPMDFGTICQNLERGDKYMNSEDVYKDVQFIWDNCTKYNSKGDYIIELMKRVKKGF MKNWLAAGLYSDVQENGGNDNTGDEDVKGSKGKSKQKRRRLGND</aaseq>

Gene Sequence

<dnaseqindica>673..1407#1524..1601#2215..2452#3077..3152#3763..3772#acgcgtggtccttcacctccctgtgcgagggcgccaggataggaaggagaaggtaccctactttcaaccctagaaaaataatttcgttttcgaaatctcaggaattggatcgatgaataagattgggagcggcgagcgagtgatgatgatgctgtagtccagttccaacctcgaattatcccattttttctccgtattctgtcccaaaacgccaaaatccatggtccgaatcacctaaccagcctttggtttgtctggtcgatccctcgaggttcatcctcctcttgctccccactatcgagctttctggaaatccatcccgactttgatttttttttctttctctgatgatgctgttggtgattccttggattggttgagagttattctgttctggtctgaatcctaatctccctgcaatccaatccgtacagttcgttgcgggtcagtccaattcctgcgttacagagcattatttggagttaatttccaagaaaaaatttgggggaagttagatccaccccccatcctctccccttcttggtttgcttatactactcacctaaggtttacttagtattactcatggaatccactctacttgttaaaaaattgcagtgtgtacttctctgctggcctgtgtggtgaggtgatagctagactaataggaagatgaagcgcaagcgtgggcgtaagatgggcaagaagggcaagtcgaaagcttccaccacagcggatgcttctccaatgtccctgtccagcccgagcaccgtggatgcttcctcaaaatccccctccagcccaagcacagaggagaacggcaccagcccagcgcatcatcaggcagataatgcgcctgttattgctccgccaccagtgcctgaaccggcacctcctgagccggagaagccagccgtgtctactgacgtacagaatgctaagccaaaagtctatagccgagtcaggttgaagttcaaatctgccaaagtgttggagacgcaccagggtccttcagaagcaaaagcacctgttgatggtggtggtggtaaacctgcaagtgctgcgcctgaagcgagcaaagaagttgttgcggagaaggctattgtatcaccagacggacagaaagatgcgcaggcagcagaattgagtggttctgataaggataaggtggcaagaaaagtagcaagcataaagatcaagtctgtaggattatcttcggtagaagataaaaaccaggacaggaaagctgattcagtcagtgaacctcttccaagcaagcaggaaactgtattggaaaatgtagaaagcgagactgcattggagctgagaagctcacaagagttggaggtaaagcaggctacgccagaacgtcagcgagatgacagagagctaactgctgcacttgaagtgagtataaatttggcacatctttatatttggtctctttttgtgcaaacatgacatggtaaagatctacaaatacatggaagatacacagttaatttccttgatcttgctgccaggctattaagaaagtcatgaagatggatgcagctgagccgttcaacacaccggtggatcctgttgctctaggaatacctgtgagtatttttatttggtatcgctaggtgtaatggttttcttcctttgaaatgataaccttttggtatctttataaattttgatcttgaaaacttgcttctcgtaaattttggtgtagtattcattgcttccaacgaacaggttcatatagatatatgttaatgtccgctagatatgtaatcattactgttgttccgggtagggaaagaaccgattccatggaggggttaactctataatcagtggcttgccttccttatctgatatctctaattgttgtttgaatagtacattccatttctccattctgtagctaaattttacaactcataggctataccttgccagatgggtcatcttgcttgcaagatgagttctgcactccagttcattttgttgtttcatgaacatagttgagagagtaggaaacaatcatcacaaataaaatttgtttgcaagttctgtagatttttgtaaaagcatgtctcatgtttgttctattaccatagtaaatttatatgctcttaaatctactggtactggatttttttttcactttattagtgttccaacttttgtttatttgccattgacagttagcaaaatttgcaggattattttgatattattgatactcctatggattttggcacaatatgtcaaaatctagaacgtggtgataagtatatgaactcagaggatgtgtataaggacgtgcaatttatatgggataattgtaccaagtacaacagtaaaggtgattacattatagagcttatgaaacgggtgaagaagggcttcatgaaaaactggctggcagcaggcttgtattctgatgtgcaggagaatggtaagtattgctcaattggccataattcattcttttgttcaatatcgttttcttctttttttttccttgatgtcctataatctccgctgtcaaaatttcctagctcttgggtttaaactgccatcagttagctattagatcaccgaagattcctttatataattctaattttatttggacgtattattgtgaagctatgaaaagtaatggtcaacctcttatgatggagaccatagaataaaaaagagagagggagtaacttgaatatgagctcttgtcactagtacctgttttaattagtaagttctgtattctgtaaaatataaatgatttaatactgcaatatttattttatcattgatttattcagtctgtatggaagaaatacaaatctggttttctgttctaccatggactcatttactacataacacagtcaaataagaataatcttaaggtataataatgccattgtgccgccaacttttcacatttcgtggtggtgggtgttaaacagttctgtacacataacaggatgtccattttgggcaactatatagttcactacctgtatgaatgcatgcgttcatgtttatgatgtgttttatccaaacaaaaatataggtggcaatgataacacaggcgatgaggatgtcaaaggttcaaaaggcaagtctaagcaaaaacggcggcgcctagggtatgtaattgattttctgacagccgcatgtgcaagtttcttttgattgctttattcaagaagctaaaccatcacgtgctttcaaatttgacgggacattcacttcagcaatcatatctattagtagaaatttagaacattgtgtactatttagattcgaaaggggttaaaatcaacaaaacatgataatgcgttggaacaaaatgataatactaagacatagttgtgtactatgcatactaagacttagttgagtgctgatattgaccttttgtttgtttttaatttattcttgttatcggagttgcatgtttcgttttttggaaagtgtaaatcttcctagcagaaccatgcctcttccattgtaatcttttacagctcttaaggggctattgacggcatttcatttgcaactcagagtaaagtgataacactgtaactctaggagcacatgttttttcacttaaatattccagtcaggttaaggttattatagcaagattattttccactgacttctagtgaatacaaaacacagtagcctaatctgttgaaaaatctgtggttgtccttgttttcttacatgataatatgatatgtttaaatacaggaatgattgacacaaaaatgactgtgcatgtgctgtttgtcaagttacacgccgcaaaaaggaaaaggatgaaatcttggctgtcattgaaaacgatacagctgcagtgaatagtaacatttctgaccagcaaatcatggaggttagaattgttatccaaatctttgttctactgtgcatttcgtttatgcaccttgtctatttgaaacatttagtgtacacacagattttttttctccatctcaacctttctattggagtgatatcttgtctatttgaagtatttaatgtacattggctttatttctccatcttgatgttcaataaattaccatgaaagttttatctcatttgtctgcatgtacatattgaagtattgctcattacattcagcagatgcctgctacacactacatttgttttaagttttccaggtgttacttttaaaattgaataatcataggtttttctcaccattcatttagttgtggtaatggtacttctattttgtagtttttaggtagtttggacatttttcatgctcagaatgtaaagttgtttttccaggcatgcagatcatcttcaccttgaactaacttatgcttcacataacaggtagactcaggcattaataatgctggtagtcatgacactacctctagtcaggagcaaccaccacaaactgatatgtacagaagaacagcggtagcagatgattcagggactcagatagaaaatcatgtgaaattcttcaacaaccagccactgccacatgattatgaggatgaaggctccagaccatactttgacgaaaaagaagaggtagactatacagatttgatcagtcaggaggaacatacatccagtcagcccaatgatggctccgaagttgctcaacaccaacataaggtaattttggacagaatatcagtgctgtttcaattttaccatgtatgatatgacattatttgacaattagaataggatcaacagtggaaaaaaaaaaggttcctaatagctcctgtgattcagtggctggtttatccagcatgctctttaggttttatatttgtaatgagtaatgtgttggagtgttgcacgggttgatgcataatttgagtccatttcatcatcaagccatattgattgctcttctgttacctgtgcactctgctttcagtcacactcacatgcgctcctggtatgcctgcacatcgtgttctttttgtttgctaatacccaccatatataccatcatattaggctggaaaaccatggtgcatagcatacctagaaattctaaacattggttttatttcatttcgtcacaggagccaacagaaacaaacaagccaggagattgaaatggaggattatcccatacagaaggagaaccaatcattcttgcaactctgcgcacggcttttccccagcaaccagagttctgttttcaggggacgccattctctgttccaacagcaacagcggcaggtttcaatgaagggaagtcctctgtctgcggccataacagcgataatgaaacggtaggaattttgtccctccaatggctgcttagcagcggccgtttcgtgtaaaggaagctcaaggtggcgttgtgactttgggaaagaaagctgtaccctgaagtcacgggagctggttggaataaaacaggttagttgaaacatatctttgagctcagaggctatagcttgatttaggtacgaaattagttgggagatacctgtctattgtatgacaattatctatgtgtaaggctgtaagcttcatatttgtatcaagataattgtgatagtc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0355500, RefSeq:Os06g0355500