Os06g0478500

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Revision as of 09:18, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0478500| Description = Conserved hypothetical protein| Version = NM_001187862.1 GI:297724854 GeneID:9271387| Length = 1195 bp| Definition ...")
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Gene Name

Os06g0478500

Description

Conserved hypothetical protein

Version

NM_001187862.1 GI:297724854 GeneID:9271387

Length

1195 bp

Definition

Oryza sativa Japonica Group Os06g0478500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:17027734..17028928

Sequence Coding Region

17027734..17028573,17028644..17028928

Expression

GEO Profiles:Os06g0478500

Genome Context

<gbrowseImage1> name=NC_008399:17027734..17028928 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:17027734..17028928 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgacctccgacgacgcggccctctccgcggcaatcaactccgtcaccgacgccgctacctctgctattcggaaaaccctccgcccggccgatgacaccgtctctccggacgatcttgccgctgctcaagccctcgtcgaagccacgactgctgcaaccgtcaaggctgtccaagacgccatctccgccctcgtcgtgcgtccgtccgccgcgacggccgcggcggcatcgccttcgttttccccaaccatggtcaccatcgacgcagtggcgctccgcgccgccctcggtcttcctccgactactcccgtcgacaacacctccggagcgcccgtcgacaattcctccggtgcacccgtcgacaacacctctggtgcgcccgtcgacaacaccggacctgacctgtcaagcctcttcaccgcgctcggcctcaatcctcctcaacaacatgacaacctccctgctggttttgtgtccgggggggcgccgtccggcgccgacaccgtcgatgcgctccacgctcaggctgtctccgtcctcaacgtcaaggcactcgttcccgtcgtcctcgacctcggctcagcgaactactccaagtgtcgatgcctcttcctcatcacgctcagcaaatatgccctctccgaccacattctctccgacgccttccccaacaatggggcatgggctcggatggattgcgtcgtcctcgcatggctatatggcaccatcgccgctgatcttctggagactgttctgcagccggtcgtcaccgcacgccaagtctggctctgccttgagcagatgttcctcggccaccacgagcaacgcgccatgcaactctggcgggacactcgcggcgagctcggcgacctcgtcaccgacaaacaactcgtcctcgcgatgcttcaatgtcttaaccctaaatacgaaaatctgcaaactattcttccgttccccacgttcgtcgaggcacgcagccagctcatcctcgccgagatcaacaaaggctccaaggtctccaccactgcttcgaccgcactgctggccaccgccggtggcaaccgcagcagcaccggcggcatgaacccggcgcatgccaccggtttcagaaatccttcttag</cdnaseq>

Protein Sequence

<aaseq>MSTSDDAALSAAINSVTDAATSAIRKTLRPADDTVSPDDLAAAQ ALVEATTAATVKAVQDAISALVVRPSAATAAAASPSFSPTMVTIDAVALRAALGLPPT TPVDNTSGAPVDNSSGAPVDNTSGAPVDNTGPDLSSLFTALGLNPPQQHDNLPAGFVS GGAPSGADTVDALHAQAVSVLNVKALVPVVLDLGSANYSKCRCLFLITLSKYALSDHI LSDAFPNNGAWARMDCVVLAWLYGTIAADLLETVLQPVVTARQVWLCLEQMFLGHHEQ RAMQLWRDTRGELGDLVTDKQLVLAMLQCLNPKYENLQTILPFPTFVEARSQLILAEI NKGSKVSTTASTALLATAGGNRSSTGGMNPAHATGFRNPS</aaseq>

Gene Sequence

<dnaseqindica>1..840#911..1195#atgtcgacctccgacgacgcggccctctccgcggcaatcaactccgtcaccgacgccgctacctctgctattcggaaaaccctccgcccggccgatgacaccgtctctccggacgatcttgccgctgctcaagccctcgtcgaagccacgactgctgcaaccgtcaaggctgtccaagacgccatctccgccctcgtcgtgcgtccgtccgccgcgacggccgcggcggcatcgccttcgttttccccaaccatggtcaccatcgacgcagtggcgctccgcgccgccctcggtcttcctccgactactcccgtcgacaacacctccggagcgcccgtcgacaattcctccggtgcacccgtcgacaacacctctggtgcgcccgtcgacaacaccggacctgacctgtcaagcctcttcaccgcgctcggcctcaatcctcctcaacaacatgacaacctccctgctggttttgtgtccgggggggcgccgtccggcgccgacaccgtcgatgcgctccacgctcaggctgtctccgtcctcaacgtcaaggcactcgttcccgtcgtcctcgacctcggctcagcgaactactccaagtgtcgatgcctcttcctcatcacgctcagcaaatatgccctctccgaccacattctctccgacgccttccccaacaatggggcatgggctcggatggattgcgtcgtcctcgcatggctatatggcaccatcgccgctgatcttctggagactgttctgcagccggtcgtcaccgcacgccaagtctggctctgccttgagcagatgttcctcggccaccacgagcaacgcgccatgcaagtctcggcagaattccaccacttcgagcaaggggatctcagcgccaacaactactgtcgccgtctcaaagctctggcgggacactcgcggcgagctcggcgacctcgtcaccgacaaacaactcgtcctcgcgatgcttcaatgtcttaaccctaaatacgaaaatctgcaaactattcttccgttccccacgttcgtcgaggcacgcagccagctcatcctcgccgagatcaacaaaggctccaaggtctccaccactgcttcgaccgcactgctggccaccgccggtggcaaccgcagcagcaccggcggcatgaacccggcgcatgccaccggtttcagaaatccttcttag</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0478500, RefSeq:Os06g0478500