Os06g0479400

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Revision as of 09:19, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0479400| Description = Similar to Phenylcoumaran benzylic ether reductase homolog TH6| Version = NM_001187864.1 GI:297724858 GeneID:9269586|...")
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Gene Name

Os06g0479400

Description

Similar to Phenylcoumaran benzylic ether reductase homolog TH6

Version

NM_001187864.1 GI:297724858 GeneID:9269586

Length

2753 bp

Definition

Oryza sativa Japonica Group Os06g0479400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:17121362..17124114

Sequence Coding Region

17121655..17121851,17123250..17123488,17123579..17123616

Expression

GEO Profiles:Os06g0479400

Genome Context

<gbrowseImage1> name=NC_008399:17121362..17124114 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:17121362..17124114 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>agatcatcgccgccatcaaggaggccggaaacatcaagaggttcatcccgtcggatttcggcaacgacgccgaccacgcgcatatcgtcgagccggcgaaggcgaccttcgacgtcgaggcgcagatccggcgaacagtggaggccgaggggatcccctacacgttcgtcagctgcaactttttcgcggggtactatctccccacgcttgtgcagcctggagccagcggcctcccagctgacaaggttgtcattctgggagacggcaacaccaaaagcaatatttgtcgacgaggaggacattgcaacgtttaccatcaaaggagtggatgatccaaggatgctgaacaaggtcctgcatataaggccaccagagaatgccctgtcaatgaacgatctcgtttccctgtgggagaagaagatggggaggacctttgagagagtctatcttgtaaaatcaattattattctatga</cdnaseq>

Protein Sequence

<aaseq>RSSPPSRRPETSRGSSRRISATTPTTRISSSRRRRPSTSRRRSG EQWRPRGSPTRSSAATFSRGTISPRLCSLEPAASQLTRLSFWETATPKAIFVDEEDIA TFTIKGVDDPRMLNKVLHIRPPENALSMNDLVSLWEKKMGRTFERVYLVKSIIIL</aaseq>

Gene Sequence

<dnaseqindica>2264..2460#627..865#499..536#aggtgcacccgcccgcacacggtcgcgctgaatttagctccgccaccgtcgtcgccgcgtcgtcggaatcgataatccgatggaacctggagatcgtaataagagcaggatccttatcatcggcggcacggggcacctcggcaagttcatcgtggccgcgagcgcgcgcgccggccacccgacctccgccctcgtgcgcgccaccgcgccgcctcctccggcgacgggcggcggaggaagcagctccagggcgcggctgctgcagagcttcagggacgccggcgtcaccatcctgcaggtgcgtacaaccgtacctcgcgtgctgctgttcgatcgtttctgcgtctgaaataataacatgcttgtcgtccgaaatccgaatcgatcacacacacatatagggcgacatcggcgaccacgatctcctggtgaaggcggtgagggccgccgacgtcgtgatatcggtcgtcggctaccatgacgtcggcgaacagatgaagatcatcgccgccatcaaggaggccggaaacatcaaggtcaacgccctcatgtcgatctgctgcccctgcttccgttggctctgtatatatacactgatcaagctgtaaataattgggaagttgcagaggttcatcccgtcggatttcggcaacgacgccgaccacgcgcatatcgtcgagccggcgaaggcgaccttcgacgtcgaggcgcagatccggcgaacagtggaggccgaggggatcccctacacgttcgtcagctgcaactttttcgcggggtactatctccccacgcttgtgcagcctggagccagcggcctcccagctgacaaggttgtcattctgggagacggcaacaccaaaaggtaaaaagaaaacggagtaacaaatcttcagttagggcctgttcactttgatgccaaaaaaaacttaccaaattttagtataccaaattttagtattatctaaattttggtaattataccaaaattttggtaacttgccaaaattttggcaggatttcttatatagttactaaaatttgacagcaaactaaatgtagtcacttttttttaactttaccaaaacttggtaaggttgaaaatgacatcaaagtgaacaggcccttaatttttcggtaacatcacaatgaatgtgtgtagatgcatgcagcgctgaggtaaatttaccattcttaaagagcctagagatattatattttataatgtaaaatttggtgcttataattagtaaaatttttaatataaaatatatttacctcaaagtaatttctcaataacatttttttctttctggagtattttcttgttcttctttttttttgtcgcagaagccaaatagtaaggattttttcatcatggatttcgagagaaaataatttttaatgtaaaatgatgcatagttctcatgcacgcttgccaaaaaaaaaagacaatggattttgtttccacaagagcaaaatcaaacattttaaaggaaaaaagcaaaatcagactaatcttaacttatcttatcttatattataatagtgaaagcagtaagctttcttgcacgaggatgtgccatatcatcaaaaatatattagccgtcgatgaagagttcggataaacaatggtcatcggatcgaaagagtgcatgtattaaaaaaccaaatttccagaggtttctgtatctcctcctaattaagcatatgattcaaagagagggaacaaaggtggcttctagtgatttctcttacaatccatactttgtaaacaaattaacttatatcagaaccttcttaaaagctaatgtaaactaatagaccatacacagaagtcttaaatagaatcaaaaggcacgcaaagcgcacctatatggctagttatatactccctccgtcccaaaaaaaactcaattcctaagtttcaatgtctaacgtttgaccgtccgtcttctttgaaaaaataagaaaaaaatttaaaaagataagccatgcataaagtattattcatgttttatcatctatcaataatgaaaatactaatcataaaaaaatttcatataagacggacggtcaaacgttagacacggaaactcaagaattgagtctttttaggacggagggagtactgattagctacttcagagctggtattgatcattgatcaacatttctgcatggatattcacaaactttttttttaaaaaaaaaaagatgcactgaactatggccggccttcgttctttgcgaaatgtttcagcaatatttgtcgacgaggaggacattgcaacgtttaccatcaaaggagtggatgatccaaggatgctgaacaaggtcctgcatataaggccaccagagaatgccctgtcaatgaacgatctcgtttccctgtgggagaagaagatggggaggacctttgagagagtctatcttgtaaaatcaattattattctatgatgaacaattgggcattggagattattggttttgttatttggaatttattcacaaagtggttttggagatgattagatttacaggggatcgcaggattttatcattttgtgtgaccggtcagaccgggctctagtagccggtcagaccggcgtgtaatgcgcggtcagaccggtgcagcccgcggtctgaccggccgacactgtgtcggtttcggtttcgggttgtttatttggatatccgagtttatacgtatgtaatactattgtttgctgctaatgaatcaagttggagat</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0479400, RefSeq:Os06g0479400