Os06g0492000

From RiceWiki
Revision as of 09:19, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0492000| Description = Similar to CDP-diacylglycerol--inositol 3-phosphatidyltransferase 1 (EC 2.7.8.11) (Phosphatidylinositol synthase 1) (P...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0492000

Description

Similar to CDP-diacylglycerol--inositol 3-phosphatidyltransferase 1 (EC 2.7.8.11) (Phosphatidylinositol synthase 1) (PtdIns synthase 1) (PI synthase 1) (AtPIS1)

Version

NM_001064213.1 GI:115468157 GeneID:4341084

Length

6595 bp

Definition

Oryza sativa Japonica Group Os06g0492000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:17880639..17887233

Sequence Coding Region

17881355..17881474,17881560..17881616,17881942..17882056,17882326..17882391,17882478..17882522
,17882617..17882656,17882881..17882893

Expression

GEO Profiles:Os06g0492000

Genome Context

<gbrowseImage1> name=NC_008399:17880639..17887233 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:17880639..17887233 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>aagtttaaccaagcatcaacatttggagctgtgctggacatggtaacagatagggttagcactgcctgtttattggcacttctctcccaactttacagacctggcttagtttttttgatgctgcttgggttggatattacaagccattggtttcaaatgtatagtatgttcctatcaggtaaaactagccacaaggatgtgaaggacactggcaattggcttctaaaattatattatggacatcgaccattcatggcattctgttgtgttgcttccgaggttctgtacataattctttttctgtttgctgatgagaaatcgacaagcttgcttaatgtgtgcagatgctttctaaagggaagtcctctcactttcttcgtttttatttcaactctagttggttgggcattaaaacaagtgatcaatatcatccaggtatccagaaaccaacattaa</cdnaseq>

Protein Sequence

<aaseq>KFNQASTFGAVLDMVTDRVSTACLLALLSQLYRPGLVFLMLLGL DITSHWFQMYSMFLSGKTSHKDVKDTGNWLLKLYYGHRPFMAFCCVASEVLYIILFLF ADEKSTSLLNVCRCFLKGSPLTFFVFISTLVGWALKQVINIIQVSRNQH</aaseq>

Gene Sequence

<dnaseqindica>5760..5879#5618..5674#5178..5292#4843..4908#4712..4756#4578..4617#4341..4353#tccccttcccttcgcgtaaaagaaaatctacagtctctcgtcgtctcctcccgccctccgcccccttgcgcggctgaacaggggcggggcgccgatctccatctggcgagcagagcagggaaggcgaggggatcctggtgagcatccacatcctctttccgattcatctctctctcccagcgggactacttttgtctggaatttgcttgcgttcgttaaccctagcttctcttctagatctggaagaatatcttctcttaatttcagagccttaatcttaatacaagtaacagtttgtttgttcccccaaaagtttgggggttcaactgaacccccatgtcccaaagttggatccgcacatggtgttttggttctgattccagaacgaaacttgatgccatgggaagaggggaagagtagggggagagggaaaacgaacatagaactcgtatgcaacccaagtgttaacatttgcttgcttacataaatgttgttttctatttgattttgggcagcttgatagtagtcgcaacatgtagaagtagccggagatccatcacaaaaatatagagcataacacttgtctatgaacaaaaaaagaaaaatgcatcatgaaacaaagcattcttcttcctgaacaataggataataggtgatacatttattctgctccctttaataccttgcggaagaggatggacctactaggtgaataaaactattagagtattttgtttctagatctctcaggttactcttattacaaaaaaaaaaacccaaatattttttttctagttctctcaggttgctattattacaaataactttttccaatacatttagtaatcacgtaatgtattaagcataagcccaccaatcatattaggaatgtaaacatagactaatggtgtcttatcagaaaaaggttgtgccattggagatcaatagttattactcgcttgaagcctagaagcttctcacctaaattgctgcaagcagtccctatataggaattccttgcaaataattcatcagtttatagacttatccaaataacaatgaaacaagcaatatttttttgaggaaattgctggcagcactgtttatatagaaatttctgtaaaataattgctcctgagcttgtgtttgtcataaatgttagttgttactgtagatgtttctttccttaaaagtttccctaaacattcttgcttgtttacaggaattcctatatgaacactgttgccagcaatttgctttttaaatattcttgcttgtttcattgtgacattgttatttggacctgtctataaatgaatgtaattattttacaggaattcctatatagggactgcctgtggcaatttaagtcactacaacaaaacatgtgtttagagacatcttatttatagtctagagacgttttgaacccgtctttaggcatacatagagtcgcttcttcaaagcgtcccagaagcgtctccgttaggaccgtctcaaaattataaagacgctccatatagcatctctacaagatctgagacatgaaatagcgtccctacgttagttgagacgcttttgtaaatgggatccaataacgtgtctcatggtgcgtccttatgagtaactgagacgtgtacatacgattcattgtaggatgccatgcttggcatatttacagcattcacatctgagcagtatatatcgccatcaacatatataccaaaatgacagtaaacagtaaaacactccaatagatgaaaggtaattatattaaggacaattgtgattcacaagtcagctaaacagccatacagaaaaaagagatttgcgtcatctcttagaaaaataaatttataactgttcctaagataattcttgctttatctcctcccttcttcacagcatgataaaatatatctataactgttcttaagataattcttgctttatctcctcctccttcacagcatgatgtagcaatcctttacaatcttcagtatcttctaaaatgaattgtgtaaaccaaatcagtgtacatgataagatttctaaaaaatgtaagaaagctagctaagtttactaggccataaacagagaattagacaatccatacatgtattgattcatagaagatacacccatcacatatttcatatttgtcaggagcttattcctagcattctttactagcttcagtaaagatttattgaaatcgacccttaataaagtaaaacaaaataaagcacttcaatttgtatatttctgaacaaagagactatagccatactacagtattaacatgagaatattctcctacagatatccaacaatttaccttaatagctacttgttctatactttttatgtggctagaatttctcatcatcactataagtaacaggtaaaaacttatgatggccatacctttgacactttagcagttgctctccctcctgcatgtaaatactttggaaacttcagcatatagaaagcaaatctcccattttggaccagcatctctattcctttactcatatgccaccgaaggacagtatgaagaaccatcgcatcattcagaactagtgtccgagatccaagttaaacaagcattaataccaatatttgtttcaaagtgaatcgattagaagattgagttgagtcaaagtaatgcctctctgtgttttaatgtgattttgttgctaaaactacttaattaatgctgaactaaagcaggggaaagaacacagcgttatgcaatccaatactccaaataatttttttgcaagcgataccaaattaccaagtgattatctttctgaacaaagtatacaacaatcccaaagtatcatcatcagaattttttcctaaaaatctgcaaaaaaaaaagttaccttcaacaatactcatctgtatttttgtgccttcttgaagctaaaattccaaatgtagtcatcagatggaatggaatcagtagcaaaaaagaatttataatgagcccttaatgatcgacatattggtattgattgatccacagaggttcacaaatcatcaaattgattatcagatctgcatcatgcaagtattggtattagcattttgtcaaacaactagtacgatggttcattcctgaagcagaaagaacgaaaggtacagatcaatatttactcttttatacttctgcaggattacgaaataatccgatggggtagaactcaacataaagtctggacaaattgaatcacacaaacaaatcaaagcacctttgtagttccttaagccttacagattaggggatgagagagcatacctaccaagctaccaccgtggagttgttgctgggctggtgaaggcaactgagggagggacgcgttggcgatggggagtcgctgattaggcggcaaactgccagcggtggctcccatggcgaggatcagagcaggcagtggtgggcggcggcctgaggaggaggaggcagatgtggcattgactcgccgaggatgaggcgccgctggcccccggtcgaggacgagccggcggcaggcatcgagatggcgactggtggaagataggcggcggcaccaagcaggcagttcgatctagatgggagtttgttgcagcacgcagagaggatgaggacgtgggtggtttccaggagaaaaaaaaattcaatccaaatcttaatttttgagaaatcaatgtaaaactagggcgttatttaaaacgtctcataaaccgtctttattggtggggtagcctagaaaatagagacgatttaagtctcgtctccagccaaaggtcttcatttgtttgttttgttgtagtgagtgagaagctttctggctcttagtgagtaataactactgatctccaatggcacaaccttcttctgagaagacgccgtcagtctatctttacatccctaatatcattggtgagtttctgtacgatttcttgtttattacagtacgctattaccaaatgtactgtaaaaagttattttgtaatattaacaacccgagagaactagaaacataatatttgggaataacatattagaacacatatgattgaatagaagcaatggccatttttttttcttactaattgttattggcatcttgttttcatgcaggatattttaggatcatcataaacttcattgcttttgctgtatgttattccaacagggtgctctttgctatcttatacttcttcaggcgagtgttttaactttatccacacactacttgccttgtgcaatttgtatatctatgaatttaacatcatcaagatctatcagctttttctgcgatggattggatggttggtttgcatgaaagtttaaccaaggtaatagaagcatttcttatgtgttcaaagtcttcatgtagtttgtcattctgcagagaatattatttctaattttttcccttgtgccttgagactttatagcactagatattttatgaagagtaaattatatgaacttctaaaaaactattgtctgctcaacagttaaatcttggtttatctttactcattatctgatcagttaatgttattctatgtatcagcatcaacatttggagctgtgctggacatggtaacagataggtactcctcgaataaatcattgaactctgtatatgcaaggtgaatacattctgcagcctgaaataatttcactgttcaaattgctcctcctcagggttagcactgcctgtttattggcacttctctcccaactttacaggtataaatgaaagcagaaaatacttcaattgttgtaccttcgatctagatacctgatgcaaactgtatttgcaagtttctttgcagacctggcttagtttttttgatgctgcttgggttggatattacaagccattggtttcaaatgtataggttagttttctataccagtttttcagttagtgccactttgtagttttcttcacctcgtaggtgcatcctcttctgtaaggtattaaatggagtagaaatgcagaataaatgtatcacttattgtcttattgttcaggaagacaaaatgctttttttcatgatgcatttttttcccatagacaagacaaagtgttatgctctatagatttatgatgaatctctagttactgctacatgttgctaactacttggtggtgtttttttactagtatgttcctatcaggtaaaactagccacaaggatgtgaaggacactggcaattggcttctaaaattatattatggacatcgaccattcatggcattctgttgtgttgcttccgaggtacatgattaatctatatttggcagtatctacatggatgtttggctgcttacatgctggactatgtgcaacatgagtgctatgctggatgatttttttactagttcagctgaagtatgggcatgaattgaataggatgtgttgatgtgcccaaaaaactgaatggcccaacgagcctatcttacatctgcacatatagcaccaaatagtcatttgatatagttgaggagtcaccatctctgtatgtctagcacccttatacactcttgactaaactgcacttaaatgtttcaccttctaacataggaagtttataaaattacaggttctgtacataattctttttctgtttgctgatgagaaatcgacaagcttgcttaatgtaagaagacgatcatctctactgttgcttaatacaatcaagtcttgttgcagtagttaacatctggtatttctatatgcaacaggtgtgcagatgctttctaaagggaagtcctctcactttcttcgtttttatttcaactctagttggttgggcattaaaacaagtgatcaatatcatccaggtatccagaaaccaacattaaaatttcttgcagttgcaggtgcttgatatttgtacatctgcaagtatttaagttctaattatgacactaataataggtttgttataaagctgaagaaaaagtgttgatgcactggttagctcatatgctttacattagggtttagctagccctggttaataggagatacattatgcccaaattataggttcacatatgttgctaaaagcctagagcaggtgcttattgtaacattctattctttatttagagtgtctatttatatgattctagcagtactaatagcgacacattaataagaagtgtggatcgagatgtcgactaccactagagttgggcacttgtaggatcgagatgtcgactagaggggaggggggggggaggggtgaataggcaatttaaaactaaatgacacctaatataaaactaagggtgtgtttggttcccggtcaaggttggatgggatatggcggtccagttttttgtttggtggagtgaatatggcgatccagttttttgtttggttgtagggatgaaagttgatatggtgatccatttttttgtttggttgggggagtgggatggatgagtggttgcaatcaccctttcattagaggtggtgagtctacccctccaaattctcacccaaaaattatcaatctactaaaaaaaatctaaatagaaataaaaaagcagaaagaaataaaaggggaagg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0492000, RefSeq:Os06g0492000