Os06g0540400

From RiceWiki
Revision as of 09:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0540400| Description = Zinc finger, RING-type domain containing protein| Version = NM_001187909.1 GI:297724948 GeneID:9266696| Length = 682...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0540400

Description

Zinc finger, RING-type domain containing protein

Version

NM_001187909.1 GI:297724948 GeneID:9266696

Length

682 bp

Definition

Oryza sativa Japonica Group Os06g0540400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:21157529..21158210

Sequence Coding Region

21157529..21157542,21157718..21158210

Expression

GEO Profiles:Os06g0540400

Genome Context

<gbrowseImage1> name=NC_008399:21157529..21158210 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:21157529..21158210 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggttcgcgttccggctcgtcgacgacgacgagtacgccgccagtggcgccggatgagaaccggccgccggtggtcaaagggccggcgatcttcagctacacctgcgctggcctcgtcacgggcgtcgcgctcgtcgccgtcgtcgtcttctactgcaaccgccacgtccggaggcgcgcgcatgtcgtcgtcgccggcggcggcgggcgagaggacgacgacgtgcgcagcgtcgctggcgtggcggccaagatcccggagttcgcgtacaccgggtcggcgagcggcggcgagggggcggcgcagtgctcggtgtgcctcggagcggtgcggggcggcgagatggtgcggcggctgccggcgtgcaagcacctgtaccacgtggagtgcatcgacatgtggctggcctcgcacgccacgtgcccgctctgccggacggaggtcgagccgccgccgggggacgacggcggccgacctgcgccggcggcggctttgtatttgtaa</cdnaseq>

Protein Sequence

<aaseq>MGSRSGSSTTTSTPPVAPDENRPPVVKGPAIFSYTCAGLVTGVA LVAVVVFYCNRHVRRRAHVVVAGGGGREDDDVRSVAGVAAKIPEFAYTGSASGGEGAA QCSVCLGAVRGGEMVRRLPACKHLYHVECIDMWLASHATCPLCRTEVEPPPGDDGGRP APAAALYL</aaseq>

Gene Sequence

<dnaseqindica>669..682#1..493#atgggttcgcgttccggctcgtcgacgacgacgagtacgccgccagtggcgccggatgagaaccggccgccggtggtcaaagggccggcgatcttcagctacacctgcgctggcctcgtcacgggcgtcgcgctcgtcgccgtcgtcgtcttctactgcaaccgccacgtccggaggcgcgcgcatgtcgtcgtcgccggcggcggcgggcgagaggacgacgacgtgcgcagcgtcgctggcgtggcggccaagatcccggagttcgcgtacaccgggtcggcgagcggcggcgagggggcggcgcagtgctcggtgtgcctcggagcggtgcggggcggcgagatggtgcggcggctgccggcgtgcaagcacctgtaccacgtggagtgcatcgacatgtggctggcctcgcacgccacgtgcccgctctgccggacggaggtcgagccgccgccgggggacgacggcggccgacctgcgccggcggcgggtgagtcgtcgccgacggaggcgctgccaccggtgtagcactgtagctagctagctaggtccgtccatagtcatcacatcacatcacatcatgattagttaattcatacgttttgggcatatcatttcttgatttgaaccttaatctagcttggcatgtatgtgctttggttcagctttgtatttgtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0540400, RefSeq:Os06g0540400