Os06g0548800

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Revision as of 09:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0548800| Description = Similar to Nectarin 5 (Fragment)| Version = NM_001064364.1 GI:115468459 GeneID:4341257| Length = 2029 bp| Definitio...")
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Gene Name

Os06g0548800

Description

Similar to Nectarin 5 (Fragment)

Version

NM_001064364.1 GI:115468459 GeneID:4341257

Length

2029 bp

Definition

Oryza sativa Japonica Group Os06g0548800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:21644659..21646687

Sequence Coding Region

21645080..21646675

Expression

GEO Profiles:Os06g0548800

Genome Context

<gbrowseImage1> name=NC_008399:21644659..21646687 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:21644659..21646687 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaggacgtcgatgacgacgacatccagggccctcgcgctggtgctcctctcgtcttgctgcctcctcgtcgccgtcgacgcggcctacgccaagaagccgaatctgtccaagaatgacttcctctcctgcctagccgccggcatccccgcccggcagctgtacgccaagggctcgccgtcgtacggctccgtgctgacgtccaccatccggaacctcaggtacttgtcgtccaagacgtgcaacccgctgtacatcgtcacaccgaccgacgtgaagcacatccaggtggccgtctcctgcggccgccgccacaacgtccgcatccgcgtgcgcagcggcggccacgactacgagggcctctcgtaccggtcggagatccccgagccgttcgccatcgtcgacctcgtcaacatgcggaacgtgaccgtcgacggcaaggcgcgcacggcgtgggtggagtccggcgcgcagatcggcgagctctactacggcatctccaaggcgagccccacgctggcgttcccggcgggcgtgtgcccgaccatcggcgtcgggggccacttcagcggcggcgggttcggcatgctgctgcgcaagttcggcctcgcgtccgacaacgtgctcgacgtgaaggtggtggacgcgaacggcaaggtgcaggaccggaagtcgatgggggaggactacttatgggccgtccgcggcggcggcggctcgagcttcgggatcgtggtgtcgtggaagctgaggctgttgccggtgccggcgacggtgacggtgatccagatgcccaagatggtgaacgagggcgccgtcgacctcctcaccaagtggcagtccctcgcgccgacgttcccggaagacctgatgatccgcgtgatggcgcaggcgcagaaggccgtgttcgagggcctctacctcggcacctgcgacgcgctcctcccgctggtgaccagccgcttcccggagctgggcgtcaaccgctcccactgcaacgagatgtcatgggtgcaatccatcgcgttcatccacctgggcaagaacgccaccgtcaaggacatcctcaaccggacctcctccatccgagccttcggcaagtacaagtcggactacgtgacgcagccactgtccaaggcgacatgggacaccatctacaaggactggttctccaagccgggctccggcatcatgatcatggacccgtacggcgccaccatcagcaaacccggcgaggcggacacgccgttcccgcaccggaaggggatgctgtacaacatccagtacatcaccttctggttcggcgagggcgcgccggcggaggcgccgatcaagtggatcagggacttctacgcgttcatggagccgtacgtcaccaagaacccgaggcaggcgtacgtcaactacagggacctcgacctcggcgtcaacgccgtcgaggccggcgccaacgtctcctgctaccaggtcggcaaggtgtggggcgagaagtacttcaagggcaacttcgagaggctcgccaggacgaaggccaaggtggatcccaccgacttcttcaggaacgagcagagcattcctccattgctcgcgtga</cdnaseq>

Protein Sequence

<aaseq>MARTSMTTTSRALALVLLSSCCLLVAVDAAYAKKPNLSKNDFLS CLAAGIPARQLYAKGSPSYGSVLTSTIRNLRYLSSKTCNPLYIVTPTDVKHIQVAVSC GRRHNVRIRVRSGGHDYEGLSYRSEIPEPFAIVDLVNMRNVTVDGKARTAWVESGAQI GELYYGISKASPTLAFPAGVCPTIGVGGHFSGGGFGMLLRKFGLASDNVLDVKVVDAN GKVQDRKSMGEDYLWAVRGGGGSSFGIVVSWKLRLLPVPATVTVIQMPKMVNEGAVDL LTKWQSLAPTFPEDLMIRVMAQAQKAVFEGLYLGTCDALLPLVTSRFPELGVNRSHCN EMSWVQSIAFIHLGKNATVKDILNRTSSIRAFGKYKSDYVTQPLSKATWDTIYKDWFS KPGSGIMIMDPYGATISKPGEADTPFPHRKGMLYNIQYITFWFGEGAPAEAPIKWIRD FYAFMEPYVTKNPRQAYVNYRDLDLGVNAVEAGANVSCYQVGKVWGEKYFKGNFERLA RTKAKVDPTDFFRNEQSIPPLLA</aaseq>

Gene Sequence

<dnaseqindica>13..1608#aagctgcatgccatggcgaggacgtcgatgacgacgacatccagggccctcgcgctggtgctcctctcgtcttgctgcctcctcgtcgccgtcgacgcggcctacgccaagaagccgaatctgtccaagaatgacttcctctcctgcctagccgccggcatccccgcccggcagctgtacgccaagggctcgccgtcgtacggctccgtgctgacgtccaccatccggaacctcaggtacttgtcgtccaagacgtgcaacccgctgtacatcgtcacaccgaccgacgtgaagcacatccaggtggccgtctcctgcggccgccgccacaacgtccgcatccgcgtgcgcagcggcggccacgactacgagggcctctcgtaccggtcggagatccccgagccgttcgccatcgtcgacctcgtcaacatgcggaacgtgaccgtcgacggcaaggcgcgcacggcgtgggtggagtccggcgcgcagatcggcgagctctactacggcatctccaaggcgagccccacgctggcgttcccggcgggcgtgtgcccgaccatcggcgtcgggggccacttcagcggcggcgggttcggcatgctgctgcgcaagttcggcctcgcgtccgacaacgtgctcgacgtgaaggtggtggacgcgaacggcaaggtgcaggaccggaagtcgatgggggaggactacttatgggccgtccgcggcggcggcggctcgagcttcgggatcgtggtgtcgtggaagctgaggctgttgccggtgccggcgacggtgacggtgatccagatgcccaagatggtgaacgagggcgccgtcgacctcctcaccaagtggcagtccctcgcgccgacgttcccggaagacctgatgatccgcgtgatggcgcaggcgcagaaggccgtgttcgagggcctctacctcggcacctgcgacgcgctcctcccgctggtgaccagccgcttcccggagctgggcgtcaaccgctcccactgcaacgagatgtcatgggtgcaatccatcgcgttcatccacctgggcaagaacgccaccgtcaaggacatcctcaaccggacctcctccatccgagccttcggcaagtacaagtcggactacgtgacgcagccactgtccaaggcgacatgggacaccatctacaaggactggttctccaagccgggctccggcatcatgatcatggacccgtacggcgccaccatcagcaaacccggcgaggcggacacgccgttcccgcaccggaaggggatgctgtacaacatccagtacatcaccttctggttcggcgagggcgcgccggcggaggcgccgatcaagtggatcagggacttctacgcgttcatggagccgtacgtcaccaagaacccgaggcaggcgtacgtcaactacagggacctcgacctcggcgtcaacgccgtcgaggccggcgccaacgtctcctgctaccaggtcggcaaggtgtggggcgagaagtacttcaagggcaacttcgagaggctcgccaggacgaaggccaaggtggatcccaccgacttcttcaggaacgagcagagcattcctccattgctcgcgtgatcgatcgatcgacagaaattaatcatcgacggaaacgcacaatttgcatcgagatttaattagtgtgtgtgagtggtgagtacgattaattaagtacttggacgtgtcacatgtccaacaaataaagatcaaccaactaacgtataatcgtaagaagattattgtttttttttctttttcatacacgtgtgcgcgtatgagttctacttcctccgttttataatgtaaaactttctagcattgcccacgttcatttatatgttaatgaatctagatatatgtatgtgtttaaattcattaacatctatatgtatatgagcaatgttagaaattcttatattatgaaacggagggagtagctagtagcgttttacatttcaatgttcgtgccatccacttaatttattgcgtgatgagattc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0548800, RefSeq:Os06g0548800