Os06g0552300

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Revision as of 09:22, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0552300| Description = BZR1, transcriptional repressor family protein| Version = NM_001064375.1 GI:115468481 GeneID:4341270| Length = 2958 ...")
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Gene Name

Os06g0552300

Description

BZR1, transcriptional repressor family protein

Version

NM_001064375.1 GI:115468481 GeneID:4341270

Length

2958 bp

Definition

Oryza sativa Japonica Group Os06g0552300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:21818123..21821080

Sequence Coding Region

21818291..21818542,21819978..21820793

Expression

GEO Profiles:Os06g0552300

Genome Context

<gbrowseImage1> name=NC_008399:21818123..21821080 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:21818123..21821080 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgaacggggcggggggaggaggaggaggagggggattggggggcacgagggtgccgacgtggagggagcgggagaacaaccggcggagggagcggcggcggcgggcgatcgcggccaagatctacgccgggctgcgcgcctacggcaactacaacctccccaagcactgcgacaacaacgaggtgctcaaggcgctctgcaacgaggccggctggaccgtcgagcccgacggcaccacctaccgcaagggatgtaaacctcctcaagcagagcgtcctgatccaattggaagatcggcttcgccaagcccttgctcttcatatcaaccaagtccgcgggcttcatacaacccaagtcctgcatcgtcctcctttccaagctctggatcctcctcgcatatcactattggtggaaacagcttgattggtggtgtcgagggaagctccctcattccatggctgaagacacttccgttgagttcatcatatgcctcctcctccaagttcccacagcttcaccatttatatttcaatggaggttccattagtgcaccagtgactcctccatccagctcccctactcgcacacctcgcttaaggactgattgggagaacgcaagtgttcagccaccatgggctagtgcaaattatacatctcttcccaactctacaccaccgagcccaggccacaagattgcaccagacccagcatggctctcaggatttcaaatatcatctgctggtccctcatcgccaacatacaatcttgtttcgccgaatccatttgggattttcaaagaagctattgccagcacttccagggtgtgcacccctggtcagagcggaacatgttccccggtaatgggtggcatgccggctcatcatgatgttcagatggttgatggtgcgccggatgattttgcctttgggagcagcagcaatggcaacaatgaatcacctggactggtgaaggcatgggagggggagcggatacatgaagaatgcgcctccgatgagctggagctcactcttgggagctcaaagactcgtgcggatccctcctga</cdnaseq>

Protein Sequence

<aaseq>MTNGAGGGGGGGGLGGTRVPTWRERENNRRRERRRRAIAAKIYA GLRAYGNYNLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPPQAERPDPIGRSAS PSPCSSYQPSPRASYNPSPASSSFPSSGSSSHITIGGNSLIGGVEGSSLIPWLKTLPL SSSYASSSKFPQLHHLYFNGGSISAPVTPPSSSPTRTPRLRTDWENASVQPPWASANY TSLPNSTPPSPGHKIAPDPAWLSGFQISSAGPSSPTYNLVSPNPFGIFKEAIASTSRV CTPGQSGTCSPVMGGMPAHHDVQMVDGAPDDFAFGSSSNGNNESPGLVKAWEGERIHE ECASDELELTLGSSKTRADPS</aaseq>

Gene Sequence

<dnaseqindica>169..420#1856..2671#agagtggccgctgctgcgttcagactgctccttcctcctcctcgcgagcgagaaattattaataaacaatcgagctgagctgaggcgaggcggcggcggaggaatcgatccccggcgagcgagcgcgcgcgagcagatccgccggcggcgtgggggaggcgagggtggatgacgaacggggcggggggaggaggaggaggagggggattggggggcacgagggtgccgacgtggagggagcgggagaacaaccggcggagggagcggcggcggcgggcgatcgcggccaagatctacgccgggctgcgcgcctacggcaactacaacctccccaagcactgcgacaacaacgaggtgctcaaggcgctctgcaacgaggccggctggaccgtcgagcccgacggcaccacctaccgcaaggttaaaaatcatccccccattattcctcaatcctgctgtagcttagctcccccgcaccgccatgggagggtggcggtggcgggagttgttgttgttcttcttgttgtcattcgggcttgttccttccaccacctcagccggagcaatcctggacgctactgcgatctgcgtctctgcagcttcctccgtttctgtctgctttggctttcttttgagatgtgcactctctatttttgcttcgattcgagctggtttgatgtcgaatcagctaaagatggcgtgtgcggcttagtgttcagcaatgggggaatgcaatgcggtgatatattgtctctttttggcttcaaattaaggattgatcctagatgcgctaaatttgatctatttgctttgagctttcttgtctcttgcgagatgtttgatttgtgttgccgagtcagggtagggagttgatttaataatggcgaatgcatattttggctacctggattagcaaactccataattatgtatatctaagaaaaaaaaaagatgtgaatacggaagattgaaacgattgtgggcatttcagctgaaggggaagactgttttttttttgaggatgaccggcattgtgtgccatagaatcttttcaccaaaatttgcagtacagttttaatggtttcttgcatggttcaatttacaaaactatacccttatgtactgtagtagtacatttgtatgggaaatcaccaagttgccttgcttgctgggagtggcaagaaggtatttaaagctgctgggttcagttgatgatgcatgttttaatggtgaggtcatagacaaatatgaacataacagagtgccacttacctgcatccaggtaaaaagatataatagagggattcacgattcacatcataaaacacaaagaaggtttctcaacacacacagagaggagtgctaaatggcgctcttgcgatgatcttcgtgttgtgctcatgatgccattgctttcagtgatcaaaaacataatttttaactgcgcttttgcgcttgctgcagaatagattagtagtacaggacaagtgttttgtctataggcacacccacagagggcacaacaaccatacttttctgtggattgatttgtatttagtctaaaaagagtagcagtttcttttacaagattgctaataacgcaccacttgagattttgagtaattgcctatttggaaatataattcattaaatctgaggtatattttcactttgaagtctgcagataaattggcatgtttcttttcaatttttcttttggggatagacatgcttaaattctggacaatttccttccccatacaactgttgtccagtgcatttcaattttctttacatgaatgaaattatgtagatatgtactaacaattatgtgttctatttgtttatatttcagggatgtaaacctcctcaagcagagcgtcctgatccaattggaagatcggcttcgccaagcccttgctcttcatatcaaccaagtccgcgggcttcatacaacccaagtcctgcatcgtcctcctttccaagctctggatcctcctcgcatatcactattggtggaaacagcttgattggtggtgtcgagggaagctccctcattccatggctgaagacacttccgttgagttcatcatatgcctcctcctccaagttcccacagcttcaccatttatatttcaatggaggttccattagtgcaccagtgactcctccatccagctcccctactcgcacacctcgcttaaggactgattgggagaacgcaagtgttcagccaccatgggctagtgcaaattatacatctcttcccaactctacaccaccgagcccaggccacaagattgcaccagacccagcatggctctcaggatttcaaatatcatctgctggtccctcatcgccaacatacaatcttgtttcgccgaatccatttgggattttcaaagaagctattgccagcacttccagggtgtgcacccctggtcagagcggaacatgttccccggtaatgggtggcatgccggctcatcatgatgttcagatggttgatggtgcgccggatgattttgcctttgggagcagcagcaatggcaacaatgaatcacctggactggtgaaggcatgggagggggagcggatacatgaagaatgcgcctccgatgagctggagctcactcttgggagctcaaagactcgtgcggatccctcctgatcgtgctactagagcgtcacttcttcggttgggtttatttcatatttatttgtatgctactcatctgttttttaagttcagtgtttgtagaaagagagaagggaattcagagatcctaccatggtcctctgtagatgatatatccatcctctttcagggatctgaacttgtgttagcttatgcaacttattaacttttttcttttatttactttggttttattctttctttttatattttttctttagaattgataagaaaatatgggaagggaaaggagtgcttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0552300, RefSeq:Os06g0552300