Os06g0556300

From RiceWiki
Revision as of 09:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0556300| Description = Cyclin-like F-box domain containing protein| Version = NM_001064391.1 GI:115468513 GeneID:4341288| Length = 4257 bp|...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0556300

Description

Cyclin-like F-box domain containing protein

Version

NM_001064391.1 GI:115468513 GeneID:4341288

Length

4257 bp

Definition

Oryza sativa Japonica Group Os06g0556300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:22090902..22095158

Sequence Coding Region

22091240..22091265,22093103..22093301,22093399..22093554,22094030..22094920

Expression

GEO Profiles:Os06g0556300

Genome Context

<gbrowseImage1> name=NC_008399:22090902..22095158 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:22090902..22095158 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgaccggaagaagtgcaaggcggcggcggtcgccaccacggatggcggtggcgaggaccgcatcagcgcccttccggacgaggtcctccagcgggcgctctccttcctgccctcccgcgacgtggtgcggacgtgcgtgctctcccgccgctggcgccaccagtggaagtccgtgcccgccctgcgcatctacgcgttcgatgattgccgggacgtccagcacctgagtgatttcgtcaccaactttctgctccggcgcaaccggttggctctacatgaatgcgacatcacatgctttgacgagggagacggttgtgaggtgttcggggagaacgccagacagtggatccggtatgctgtatcgtgccaagttcgggtgcttcgtgtttctgttgaagcgcacacccgtctatttggtgcgcctctcaaagcccagcgtttgaagagattagaacttttcagcgtggagttgggggccttctcccttgatttctctagctgcagggagttggaggagttggagctgggaggttgcatcatcaaagacaaagtaaagcagatcttatcagaatcattaagacgtctgagaatcgaaggatgtgattttttccgaaatcgcactcgcatttcttgcccaaatctcatttccttggagattaccgattttaccttgtacactccagtgctcatgagcatgccttccttggcatcggcatttatcaggtttggtgaacactgtgctgattcttgtgactgctactattacggcgaatttggtcccgattatactggatgccatcacagtacagttaagggcaatggcactgtgcttctcaatggtttatcagatgccatccaattagagttgataagtggtgccggagtgttcattttcagaagggattttagatgttgccctacatttaacaagctgaaaacactgttgctcaatgaatggtgtatggctgctgactccagcgcactaatttacttcctccaacactcaccggttctagagaaacttactcttcaacttcggaagagccaacgtactatggtcaaaagaggtagcacgaacaaaaatcagaatgaaaaattcttggtgtcaaagcatctcaagttagttgaaattaaatactgtgaggatgagatggttcaacaagttttacatgtcctaagtgcttgtggcataccatccgagaaaattatcatccaacggataagctcatgggcttctggaggttttagtttcgagcagaggaaatag</cdnaseq>

Protein Sequence

<aaseq>MADRKKCKAAAVATTDGGGEDRISALPDEVLQRALSFLPSRDVV RTCVLSRRWRHQWKSVPALRIYAFDDCRDVQHLSDFVTNFLLRRNRLALHECDITCFD EGDGCEVFGENARQWIRYAVSCQVRVLRVSVEAHTRLFGAPLKAQRLKRLELFSVELG AFSLDFSSCRELEELELGGCIIKDKVKQILSESLRRLRIEGCDFFRNRTRISCPNLIS LEITDFTLYTPVLMSMPSLASAFIRFGEHCADSCDCYYYGEFGPDYTGCHHSTVKGNG TVLLNGLSDAIQLELISGAGVFIFRRDFRCCPTFNKLKTLLLNEWCMAADSSALIYFL QHSPVLEKLTLQLRKSQRTMVKRGSTNKNQNEKFLVSKHLKLVEIKYCEDEMVQQVLH VLSACGIPSEKIIIQRISSWASGGFSFEQRK</aaseq>

Gene Sequence

<dnaseqindica>3894..3919#1858..2056#1605..1760#239..1129#actaacgagaagctaccctcgagtccgacggagaaggggagggctaccgccttctgcgccgccgccgccgccgccgcggcaggttggccgcctccgatcgagtcccgctggggtgaggtgagctcagcactgtacttcttgtgcagtatttttggtttcctagatttgcccggttctcgcttggctcaaactcgttctatccctagcttgccccggcgcccgccgcttgttcgacaaaatggctgaccggaagaagtgcaaggcggcggcggtcgccaccacggatggcggtggcgaggaccgcatcagcgcccttccggacgaggtcctccagcgggcgctctccttcctgccctcccgcgacgtggtgcggacgtgcgtgctctcccgccgctggcgccaccagtggaagtccgtgcccgccctgcgcatctacgcgttcgatgattgccgggacgtccagcacctgagtgatttcgtcaccaactttctgctccggcgcaaccggttggctctacatgaatgcgacatcacatgctttgacgagggagacggttgtgaggtgttcggggagaacgccagacagtggatccggtatgctgtatcgtgccaagttcgggtgcttcgtgtttctgttgaagcgcacacccgtctatttggtgcgcctctcaaagcccagcgtttgaagagattagaacttttcagcgtggagttgggggccttctcccttgatttctctagctgcagggagttggaggagttggagctgggaggttgcatcatcaaagacaaagtaaagcagatcttatcagaatcattaagacgtctgagaatcgaaggatgtgattttttccgaaatcgcactcgcatttcttgcccaaatctcatttccttggagattaccgattttaccttgtacactccagtgctcatgagcatgccttccttggcatcggcatttatcaggtttggtgaacactgtgctgattcttgtgactgctactattacggcgaatttggtcccgattatactggatgccatcacagtacagttaagggcaatggcactgtgcttctcaatggtttatcagatgccatccaattagagttgataagtggtgccggagtggtacgcttgagccgccctataagaactcctagtgttttttgttgtcagctacatcttgttgacttttcttatccatccaagagaacattaagctttctacaaaacaagctatctaagtgtattgcctgtttgttgccaattaacaattgcggattatcattatattaacatgtaaacatcctttacagttgtttctgacatcatactatattaaactgtgactagcagagcttaactagttatccatgttaattttcaatacctggtatatcatgttcttgtttactatgtcttgttcatcagaagatagcaaaaccaagtacaggttataaatctctgcatcttcttctacctaataattacttgaaatataaaaaaacccctacacacagctcctgttcaatccagtatttccaaatctgctattatgaagttagaccttgaatttattctcatcaatttgtgcattgtccagttcattttcagaagggattttagatgttgccctacatttaacaagctgaaaacactgttgctcaatgaatggtgtatggctgctgactccagcgcactaatttacttcctccaacactcaccggttctagagaaacttactcttcaacttcggaaggtaagaaagattacatgtaattagtatagctttgttttattagagttttcttgtatagttgattgattcaattttaaaattactttgtttgctacagagccaacgtactatggtcaaaagaggtagcacgaacaaaaatcagaatgaaaaattcttggtgtcaaagcatctcaagttagttgaaattaaatactgtgaggatgagatggttcaacaagttttacatgtcctaagtgcttgtggcataccatccgagaaaattatcatccaacggataagctcatgggcttctggaggtaagtcgaccaatctgcaatcttgcttgtttccattcataaattttgacaatatataagattttatcagaaagatggatattcgtatgaataatgaagaagacaacagtcttacattgttacattgcgttcacataactttgcacagagagatggatatttgtatgaataatgaagaaaacaacattcttacatacttgcattacatccatatctataccccttacaaaagggagtagtcgtgggggttgttctgcccccccaccccccacccccccaaaaaaaaaaccaccaccaccaccaactcccaactttcttttagagtaaaaatgacatgcggggctagaggacccacatgtcaaccactcccactaaccctctactctttatagcaaggaaaaagaatagtgtgggaccaaagggcccacatgtctgtaacaaacatatacaacaattaagagatggtaataataggttaaagataattttctttaattaattaaaatcccgttgcaacgcacgtaaaatatgctagtaacctataaattctttagctaagccttagcagcattgtgtacctacattttcatgcatcttttttctgtgattgttggttgccaacccaaccatgaaaagagaggaaggtgtcttgtgcagcccatcagggccccaagagtagtccacctctctagggccgccggtactgtacatgaacagtaccatgtggttactgtccatgcgtggtactgttcaaattgggtgttgcaacagagataagattacatttatttgttatctatttccttaatctgagacataggtttcctaagggtcaagttctcccatctatgtaagggtgggtatgtatcttatttgataagtttgttatgggctttgattaatggatagggtaaaaggtccaaagaccgcgataaaggtgggattgcactggttggcgtcatgtttgcctgttgtgccaggagcccaggacctcaggagactctgatcaagttagccgaactttatggttttttgcttaattcccgatggggtacatactagccacatagggcctgtagggagaacactttacatccaaggaattaatgtctactatcagagaaaccaatccgatctctatctctaatttgctaacaaatctcatccattggctaactagataatctcctatctttatttcatttattcttaatttgctaattgacctgctaagtatccgtaaggggttaccacaagcccattacagggttactgtaatcttgttggcccattggaaagattggcttgtttcaagctgacaagtgctagtgccattcaaatgataaccccgtactatctgcaaaaaaagagaaacttgcatgatctctagggtcaaatgcactatctgtagcttacaggtagattagatgggtgcatgtagatgataatacctgagagcgtcaattagagtgagtacacgtgagaggtgtctgcatgtgttttcaagccacagatgatgggatttgacctagagctagcacaccacttcaacaagattagctgttaaaatgagcagttacattcattcacccagttagaagttttttagacccagtgatgatatatttataatacatcgttagggcttatgttttagatcaaactgattgttgaaggcaaagggaacatcctgtaagtaaaatgccctagccaaaaaaaaaactgtgaaaatgaaggattcctgcatttcaatgtccctttccatcaatagatttttcttattacttttatatggacctttttcggtgcttattgtatcttgttcatgtttatacaggttttagtttcgagcagaggaaataggctcgttgattgttgagaattgtgcccctgaatctggcgccacgaagctgctggcttccacgtctgtctatcaagatcatgggtagagtgacattcttaggaactagtagtagtagaatgagcagcctgacttgcttgttgggactagtatgtttcgtgtgaatatctgatggcacatggcatgtttcttgtgcttccttctgattaaactcattcatgtttggtaatgcctggagaaattgtgttaatatgtgctgttcttgagtagaagctgaaactgcagcctgaactgaaacactgctgaaacttgtgtgtccaacagagctctatgttgcctt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0556300, RefSeq:Os06g0556300