Os06g0560700

From RiceWiki
Revision as of 09:23, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0560700| Description = Lipolytic enzyme, G-D-S-L family protein| Version = NM_001064405.1 GI:115468541 GeneID:4341304| Length = 3220 bp| D...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0560700

Description

Lipolytic enzyme, G-D-S-L family protein

Version

NM_001064405.1 GI:115468541 GeneID:4341304

Length

3220 bp

Definition

Oryza sativa Japonica Group Os06g0560700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:22324777..22327996

Sequence Coding Region

22324806..22325255,22326133..22326420,22326856..22327123,22327683..22327900

Expression

GEO Profiles:Os06g0560700

Genome Context

<gbrowseImage1> name=NC_008399:22324777..22327996 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:22324777..22327996 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccaagctcgtcggagcaactctctacctctacctcttcctcttcctcctgctgctgcatctccattgccaccaatgcaaacctgctgctgctgcgagcttcgtcgtccatggcggcggcggagcaacggcaagggcggcggcggtgagggcggtgttcgtgttcgggagctcgctggtggacaacggcaacaacaaccacctgaacggctccggcgccgtgcgcgccgactacgcgccctacggcgtcgacttcccgctgggcgccaccggccgcttctccaacggccgcaacgtcatcgacgccctcggggagctcctccgcctccccgccgccggcctcctcccgcctttcgccgaccccgccacccgcggccgcgccgccctccacggcgtcaacttcgcctccggcggctccggcatcctcgacctcaccggcaagaacaagggagaggtcttgagcctaaagcagcagatcaccaactttgaggcagtgacactccctgacctgcgggcccacctgcagggagcaaccacagccaccaccaccaccggacacaagatgaagggccaggatttctttgaccagtgttacctgcccaagagcctgtttatcattgggacaggtggcaatgactacttgctcaactacttcaacgctggtagtgggcccacaagggcccccttgtcagagttcacaagctcactcctcaccaagctctcaaaccacctgcagagattgtatgatctaggggcaaggaagtttgtgctattctccatccaacccctgggttgcacccctgtggtgaggaccttcctcaacgctaccagtgatgcttgcattgagccgatgaaccatgcggcgctcctcttcaactctgggctaagatctatcgttaaaaatcacaatggtggcgtgaggtcacacatgcccgccgcgagcttcgtctacgtcaattcctacaagatcattagcgatataatacagcacccggcaaaatatggcatcaggaaaacgagtcgagcttgctgtgaggtgtcgaggggaggcgtgctgtgtcagaaggggggggccatctgcagtgacaggaccaagtacgccttcttcgatgggctccacccgacagacgtggtgaatgccaggctggcacgcaaggcgtacggctccaactcgccggacaaagtctaccctatcaatgttaagaagttggcaatgctgtag</cdnaseq>

Protein Sequence

<aaseq>MAKLVGATLYLYLFLFLLLLHLHCHQCKPAAAASFVVHGGGGAT ARAAAVRAVFVFGSSLVDNGNNNHLNGSGAVRADYAPYGVDFPLGATGRFSNGRNVID ALGELLRLPAAGLLPPFADPATRGRAALHGVNFASGGSGILDLTGKNKGEVLSLKQQI TNFEAVTLPDLRAHLQGATTATTTTGHKMKGQDFFDQCYLPKSLFIIGTGGNDYLLNY FNAGSGPTRAPLSEFTSSLLTKLSNHLQRLYDLGARKFVLFSIQPLGCTPVVRTFLNA TSDACIEPMNHAALLFNSGLRSIVKNHNGGVRSHMPAASFVYVNSYKIISDIIQHPAK YGIRKTSRACCEVSRGGVLCQKGGAICSDRTKYAFFDGLHPTDVVNARLARKAYGSNS PDKVYPINVKKLAML</aaseq>

Gene Sequence

<dnaseqindica>30..479#1357..1644#2080..2347#2907..3124#acattatctagctcatcagcttgccggccatggccaagctcgtcggagcaactctctacctctacctcttcctcttcctcctgctgctgcatctccattgccaccaatgcaaacctgctgctgctgcgagcttcgtcgtccatggcggcggcggagcaacggcaagggcggcggcggtgagggcggtgttcgtgttcgggagctcgctggtggacaacggcaacaacaaccacctgaacggctccggcgccgtgcgcgccgactacgcgccctacggcgtcgacttcccgctgggcgccaccggccgcttctccaacggccgcaacgtcatcgacgccctcggggagctcctccgcctccccgccgccggcctcctcccgcctttcgccgaccccgccacccgcggccgcgccgccctccacggcgtcaacttcgcctccggcggctccggcatcctcgacctcaccggcaagaacaaggtctgcgttacttgatgagcaattgtccctatatagtaattcccttcgttctaaaaatatacgatgacgctgacttttttataatgtttgatcaatcattttgttttttttaaaaatataaatattgtttgttttattgttacttgttttattataaaaaactataatctaacttctatttttacaaatttatattgaatttttgaataaatagatggccaaacaatatgtaaaaagttaacggcgtcgtatgttttaggatggatggagtatacttcttcattccttgtaatgatgcttgcgtttatttgagggtgaggctctattcggttgagctaaggctgaagttgtgaaaaaaaaggttcaagacatatttttggtaaaattattatgggctgatttggtttaaaaccctactaaaatactggtagtgttaaaatctagataaattttgacgcggtcaaattttgtagggcgatatattactagctaggtaaaaaatttggtcttaatccaaataccaacaaaacactatttgaaactaccaaaacaaattggaaccaatccaaacatcccctataaatctattcttaaaagtttgaaagccacaactagaaacataatgccataaagaaacctcaaatcaacttataaactaagcatcaaaatagattgcttcccttggatggatggttaggagttttatttatacgcattgcttgcgatgggttttttataggtttcatttttataaattgctctgttgtacttttttttcttaatgaaataaagtgtatggttcttgtgtttcaaaagaattaagatgtaaaattagccagcttaattgctaatttgtgtctgtaactaatcttattagggagaggtcttgagcctaaagcagcagatcaccaactttgaggcagtgacactccctgacctgcgggcccacctgcagggagcaaccacagccaccaccaccaccggacacaagatgaagggccaggatttctttgaccagtgttacctgcccaagagcctgtttatcattgggacaggtggcaatgactacttgctcaactacttcaacgctggtagtgggcccacaagggcccccttgtcagagttcacaagctcactcctcaccaagctctcaaaccacctgcaggtagtaccaccttaatttaatgcacaccttaattaagtaggagtatatctttgtgtacccataacatatggatttgctattaaagccacagatatggcatgttaattaattataactactggatatggtggtatagttcctggtacatgtgaaataaagagaaggaactggggagaaaatgtacaggcagctatatatatgtggaccttgaactcagactgagaagtaatgaatgtgaagggtacatgacataataatattgcaagagtacatagtagttggatggatagtacattgattggtactgtagtctttcttttctccatatcatcccttttatattcttcgagattacacataataatcaacagatacaataaatatcttttgtacatgttttatttaaattatgactcttatttttacttttttcagagattgtatgatctaggggcaaggaagtttgtgctattctccatccaacccctgggttgcacccctgtggtgaggaccttcctcaacgctaccagtgatgcttgcattgagccgatgaaccatgcggcgctcctcttcaactctgggctaagatctatcgttaaaaatcacaatggtggcgtgaggtcacacatgcccgccgcgagcttcgtctacgtcaattcctacaagatcattagcgatataatacagcacccggcaaaatatggtaataattaagcgatcatatatttctgaaactcaaaagaaattagttatgagtgaaatgatgcaccctccccttttcctttcctaccactactattttctcgtgatatttccagggtctatttggtaggggaattttaaagaaaaacaaaaggaatttaaaattatagtctttttagctatatagctgtttggaatgcaggaatggatcaagaatcccttgaaaaaactttcctaacattatctattctattgttattctagtgcaaatcaagggaaaaaatgtcctcaaatctagggaaaaaattccttgaaagaatctattacaccttttttattttaagcaagtctaaaattcatgttccaaaaccacgtccatattaatttttcagtgttgtttttttaattattcatatatttctatatatttctttttcctacaatattattattcatgtgtttttgtccatcaatccaaacattcctcatcactcgtgcaagcaacaaagctagctgtattaagtgcctaatttgctttgatggtttttataattgctcaggcatcaggaaaacgagtcgagcttgctgtgaggtgtcgaggggaggcgtgctgtgtcagaaggggggggccatctgcagtgacaggaccaagtacgccttcttcgatgggctccacccgacagacgtggtgaatgccaggctggcacgcaaggcgtacggctccaactcgccggacaaagtctaccctatcaatgttaagaagttggcaatgctgtagcagtagtaataattaatcatctctaattgtaattaagtcatacttaattagtattactagctagtagttgtgaaatggataattagctctagtgac</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0560700, RefSeq:Os06g0560700