Os06g0589500

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Revision as of 09:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0589500| Description = Conserved hypothetical protein| Version = NM_001064496.1 GI:115468723 GeneID:4341406| Length = 3104 bp| Definition ...")
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Gene Name

Os06g0589500

Description

Conserved hypothetical protein

Version

NM_001064496.1 GI:115468723 GeneID:4341406

Length

3104 bp

Definition

Oryza sativa Japonica Group Os06g0589500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:23996062..23999165

Sequence Coding Region

23996196..23996226,23996330..23996432,23997722..23998094,23998175..23998616,23998729..23998772
,23998876..23998923

Expression

GEO Profiles:Os06g0589500

Genome Context

<gbrowseImage1> name=NC_008399:23996062..23999165 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:23996062..23999165 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgacggcttccggcgatcagtcggcgggttccgcggcgagggcgtcgaagctgaggtacccgctccggtcggcgagccgggggaagggcgccgccgatgctcctccgacgagcggctccgtggcgaggagttttattccttgcagaccaaaaccatctttggatgtcagcaagagcgtttgtggtcttgatctttcatcggtgaaggataattcagccaaacctccacggaggcactcaatacagaccaagccaggtgttagccccaggccaactcctacaggaactatcactcctgtgtcattggttcgttcaaggaggtccgatagtcaagggaagtttgataccccgatatcagaagtttccatgtccacagcaaggcgcaagttcagcactctgtcctcaacctcatattggatgacacaaatcaggcttgcagaggctgcttccaagcactctatatcgttgggcttctttaagcttgcacttgaatcagaatgcgagcctctggatcgtatgagagatgagctaaaggcttatgttgtccggcatggccttgcaacagagttggaggaaccagtgaaggatattcttcaggtttacaatatcgtggaggatcttgagaagctaaagatcactgtgaactcttcagaacagccgaaaaagtctgacaaggctgctcatagtgccaccaatgtgtcaccaaagggtaatctgaagccaagatcgctgaattctgatgcagctcaaagtaaggaagcagctaaaaaagacaacattcagaagaagcctgatgcaaaggttagaggctcctacaaccggaatcctgcaaaagaagccatcaccaagaatactggtaagaaagccaagaagcaggtcaaggggcagaaggaagattgcaatggaggcagcgaggctttgccagttggtacagagcaagaacctgttgatgtggtgaaggaggtgacaaatgaagataaggagaatatgggggacagtgaaatgccaatggatcttggcatagcccaagaaatctag</cdnaseq>

Protein Sequence

<aaseq>MATASGDQSAGSAARASKLRYPLRSASRGKGAADAPPTSGSVAR SFIPCRPKPSLDVSKSVCGLDLSSVKDNSAKPPRRHSIQTKPGVSPRPTPTGTITPVS LVRSRRSDSQGKFDTPISEVSMSTARRKFSTLSSTSYWMTQIRLAEAASKHSISLGFF KLALESECEPLDRMRDELKAYVVRHGLATELEEPVKDILQVYNIVEDLEKLKITVNSS EQPKKSDKAAHSATNVSPKGNLKPRSLNSDAAQSKEAAKKDNIQKKPDAKVRGSYNRN PAKEAITKNTGKKAKKQVKGQKEDCNGGSEALPVGTEQEPVDVVKEVTNEDKENMGDS EMPMDLGIAQEI</aaseq>

Gene Sequence

<dnaseqindica>135..165#269..371#1661..2033#2114..2555#2668..2711#2815..2862#aaacgcagaactcgtttcccgtctcgtccgcatcgatcggcgccggcagttttcgaatttggggtttgagaaggttgaggaggagttgggaggttgagaaggcggcggctgattcgttgggttcgatcgggctcatggcgacggcttccggcgatcagtcggcgggtattggatttttttttttctgtttgtttgattgattggggtttaggcgggagatgcgtgtggtttggtcggtgggtgtgatgtgccggttttggtcgtgcaggttccgcggcgagggcgtcgaagctgaggtacccgctccggtcggcgagccgggggaagggcgccgccgatgctcctccgacgagcggctccgtggcgaggaggtctgtctctcctattcgaagctgcaatttctatatgcgagtgaaatctggcatgttggtttgtggaatatacttttgtcggttggaattttcagtgatttgccttcgcttatttagttacaaggacatgttagatgccggcgtttatcacgagaagttctcatctaatttaaaccacatctgctgcgaaactgaattttgctgctccggattagcgttgaaatctttgtttcctacatcaacgtgttgtgcaaatgatttatttgtttccagaatatgtagcacagacgtgtacagctagcaattagatgggtatttacgttgtcaagtggctgattgatctgaaaatagtttggtaaacgaaacatatttattgcaagaacaacaaagtatcgaatggagtgtactgtgtacatgaatcttataggactttatgtcatactgttcatgctgcagacctgcaaatcagttgccatgtgaaaaaaaaagaagttggtgccatctacagaggttgtgcaccaaccagctcactccggttctttacttttagtaatatcaagcaaggactttactactaatatcaatattggatactacataaatctgatttgtgagttgcactcactgtcaaagaagtaaaacatgcaaaacaagaacaaatgtcacaaaaactttctaaggacttgtcaacccacttgccatagtgtaatgcaagttttgtttgttaagaggctggtagaccgatgctctatattgaaagtgcatgtaaacaagctgatttagaaaggttaaccaatagagtttctgtattacttcttgttgaaccatctatggagtatgattagtccaaataatgaaatactcctaagtacatcaaaactcagcgtattcataaggacatgggcataatatttttgaattcaaaacaaagtaaacaaaaaccatcttgacttgaatgcagggtctgctcttcatttcttaagttctataatactggtcgttaggtcatatcatctttgtgtttacatctcagataagatttggtagtcctaactagtttgttccagaggttaagaggtttagctatcacaaggctgcattatctcaatatttctgcaagcttatgggaaaacaataggccagcatacacatgtgtattacttagaaactaagcatctcatggtttggtgctatgtcaagcaaaatagactagcaacttaatgcctcttacttagatgccaactataaaatttgctggatactagctctgtctttgataccatttgtagttttattccttgcagaccaaaaccatctttggatgtcagcaagagcgtttgtggtcttgatctttcatcggtgaaggataattcagccaaacctccacggaggcactcaatacagaccaagccaggtgttagccccaggccaactcctacaggaactatcactcctgtgtcattggttcgttcaaggaggtccgatagtcaagggaagtttgataccccgatatcagaagtttccatgtccacagcaaggcgcaagttcagcactctgtcctcaacctcatattggatgacacaaatcaggcttgcagaggctgcttccaagcactctatatcgttgggcttctttaagcttgcacttgaatcagaatgcgaggtgagcatcaagtgatcatttatgagcagttcagtttctttcattgatcatcatattataataagtgtgcttttccacagcctctggatcgtatgagagatgagctaaaggcttatgttgtccggcatggccttgcaacagagttggaggaaccagtgaaggatattcttcaggtttacaatatcgtggaggatcttgagaagctaaagatcactgtgaactcttcagaacagccgaaaaagtctgacaaggctgctcatagtgccaccaatgtgtcaccaaagggtaatctgaagccaagatcgctgaattctgatgcagctcaaagtaaggaagcagctaaaaaagacaacattcagaagaagcctgatgcaaaggttagaggctcctacaaccggaatcctgcaaaagaagccatcaccaagaatactggtaagaaagccaagaagcaggtcaaggggcagaaggaagattgcaatggaggcagcgaggctttgccagttggtacagagcaagaacctggtaagtgccatcatgtatttcagatattgtaattatcagtatatcacacctgttataactccacaattactgaattgttgtcaatcgttggtgtggtgaatttatatttcagttgatgtggtgaaggaggtgacaaatgaagataaggagaatatggtaagggtggcaatgatgtaacagcaattgagataaacaatacattttctggaaaatctcattatatttcttgtcttgctaatcagttcatttgtacttgtagggggacagtgaaatgccaatggatcttggcatagcccaagaaatctagaacaaccaaaccgacttcagattcaaatctttttatcgctggatatgaagtagagtgtgtggtgcttgttttttcccctcatttgttcatatatcgctggagcttgccttattatcaaaaccataaagaggtctttaagtgtgtagtatggtttgcagggtggatgtttgctttattatccctttgttaagtttgcaattctgaattgtccagtcatgcatctgaatataattgaattcttt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0589500, RefSeq:Os06g0589500