Os06g0589800

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Revision as of 09:24, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0589800| Description = Protein kinase-like domain containing protein| Version = NM_001064499.1 GI:115468729 GeneID:4341409| Length = 4117 b...")
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Gene Name

Os06g0589800

Description

Protein kinase-like domain containing protein

Version

NM_001064499.1 GI:115468729 GeneID:4341409

Length

4117 bp

Definition

Oryza sativa Japonica Group Os06g0589800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:24021732..24025848

Sequence Coding Region

24021958..24022343,24022777..24025609

Expression

GEO Profiles:Os06g0589800

Genome Context

<gbrowseImage1> name=NC_008399:24021732..24025848 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:24021732..24025848 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcaccggggcgaccggttcttggtggtggtggtggtggtggtggtgttgggggtggtggtgcggccggcggcggcgctgtccgcggacgggaaggcgctgctgtcgctgctgccggcggcggcgccgtcgccggtgctgccgtcgtgggaccccaccgccgcgacgccgtgctcgtggcagggggtgacgtgctcgccgcagagccgggtggtgtcgctgtcgctgccgaacaccttcctcaacctgtcgtcgctgccgccgcagctcgcgtcgctgtcgtcgctccagctgctcaacctctccacctgcaacatctccggcgccatcccgccggcgtacgcgtcgctcgccgcgctccgcgtgctggacctctcgtcgaacgcgctctacggcgacatcccggcgtcgctcggcgcgctgtcggggctccagtacctgctcctcaactccaaccgcctcaccggcgccatcccgcgctccctcgccagcctcgccgcgctccaggtgctctgcgtccaggacaacctcctcaacggcaccatcccagcgtcgctcggcgcgctcaccgcgctccagcagttccgcgtcggcggcaacccggggctgtcgggccccatcccggcctcccttggcgcgctctccaacctcaccgtcttcggcgccgccgccaccgcgctgtccggcgccatcccggaggagctcggcaacctcgccaacctccagacgctggcattgtacgacaccggcgtgtccggcccgatccccgccgcgctcggcggctgcgccgagctgcgcaacctgtacctccacatgaacaagctcaccggcccgatacctccggagctcgggcggctgcaaaagctcaccagcctgctgctctggggcaacgccctgtccgggaggatcccgccggagctctccaactgctcggcgctcgtcgtgctcgacctctccggcaaccggctcgccggcgaggtgcccggggcgctcggccgcctcgccgcgctcgagcagctgcacctgtcggacaaccagctcgcggggcgcatcccggcggagctgagcaactgcagcagcctcacggcgctccagctcgacaagaacggcctgaccggcgccatcccgccgcagctcggcgagctcagggcgctgcaggtgctgttcctctggggcaacgcgctctccggcgcgataccgccgtcgctcggcaactgcaccgagctgtacgcgctcgacctgtccaggaaccgcctcgccggcggcatccccgacgaggtgttcgcgctgcagaagctcagcaagctgctcctcctcgggaacgcgctctccgggaggctcccgccgagcgtcgccgactgctcgtcgctggtgcgcctccggctcggcgagaaccagctcgccggcgagatacccagggagatcggcaagctgccgaacctggtgttcctggacctctactccaacaagttcaccggcgcgctccccggcgagctcgccaacatcacggtgctcgagctgctcgacgtccacaacaacagcttcacgggtgccatcccgccgcagttcggcgagctcatgaacctggagcagcttgacctgagcatgaacaagctcaccggcgagataccggcgagcttcggcaacttcagctacctcaacaagctcatcctcagcggcaacatgctctccgggacattgcccaagtcgattcgcaacctgcagaagctgaccatgctggagctgagcaacaacagcttctccggtccgataccgccggagattggcgcgctctcgagcctgagcattagccttgacctcagctcgaacaggttcaccggcgagctgccggatgagatgtccagcttgacgcagctgcagtcgctcgacctctccagcaatggcttgtatggcagcatctcagtgttgagtgggctcaccagcttgacatctctcaacatttcgtacaacaatttctccggcgcgatcccggtgacaccgttcttcaagacattgtcatcgagctcctacatcaacaatcccaacctctgcgagtcctacgacgggcacacttgtgcatcagacatggttcgcaggacggcactgaagaccgtcaagaccgtgatccttgtctgtgctgttctgggctcaatcactctgttgcttgttgtggtctggatcctgatcaacagaagcagaacactcgcgggcaagaaggcgatgagcatgtcggttgcgggtggcgatgacttctcgcacccgtggacgttcacgccgttccagaagctgaacttctgcgtcgataacatcttggagtgcctgagagatgagaatgtgatcggcaaaggttgctcaggtgttgtgtacagagctgagatgccgaatggggagatcatcgccgtgaagaagctgtggaagacatcgaaggaggagccaatcgacgcgttcgctgctgagattcagatattggggcacatcaggcaccggaacatcgtcaagctgcttggttactgctcaaacaagtatgttaagctcttgctctacaactacatccccaatggcaatctgcaacagctcctgaaggataacaggagcctggactgggatacccggtacaagatcgccgtcggcgcagcacaagggctggcctatctgcaccatgattgcgtcccggcgatactccaccgcgatgtcaagtgcaataatatactgcttgatacgaagtatgaggcatacttggctgactttgggctggccaagctgatgaactcccccaactatcatcatgctatgtcacgcatcgccggttcttatggatacattgctccagagtatggctacaccacgaagatcaccgagaagagcgacgtgtacagctacggggtggtgctcctggagatcctgagcgggcggagcgcggtggaggcggtggtgggcgactccctccacatcgtggagtgggcgaagaagaagatggggagctacgagccagcggtgaacatcctggacccgaagctgcgcggcatgccggaccagctggtccaggagatgctgcagacgctggggatcgccatcttctgcgtgaacccggcgcccgcggagcggcccaccatgaaggaggtggtggccttcctcaaggaggtgaagtgctctcccgaggagtgggggaagatctcccagcagccgctcatcaagcccgggagccagcaaggttga</cdnaseq>

Protein Sequence

<aaseq>MAHRGDRFLVVVVVVVVLGVVVRPAAALSADGKALLSLLPAAAP SPVLPSWDPTAATPCSWQGVTCSPQSRVVSLSLPNTFLNLSSLPPQLASLSSLQLLNL STCNISGAIPPAYASLAALRVLDLSSNALYGDIPASLGALSGLQYLLLNSNRLTGAIP RSLASLAALQVLCVQDNLLNGTIPASLGALTALQQFRVGGNPGLSGPIPASLGALSNL TVFGAAATALSGAIPEELGNLANLQTLALYDTGVSGPIPAALGGCAELRNLYLHMNKL TGPIPPELGRLQKLTSLLLWGNALSGRIPPELSNCSALVVLDLSGNRLAGEVPGALGR LAALEQLHLSDNQLAGRIPAELSNCSSLTALQLDKNGLTGAIPPQLGELRALQVLFLW GNALSGAIPPSLGNCTELYALDLSRNRLAGGIPDEVFALQKLSKLLLLGNALSGRLPP SVADCSSLVRLRLGENQLAGEIPREIGKLPNLVFLDLYSNKFTGALPGELANITVLEL LDVHNNSFTGAIPPQFGELMNLEQLDLSMNKLTGEIPASFGNFSYLNKLILSGNMLSG TLPKSIRNLQKLTMLELSNNSFSGPIPPEIGALSSLSISLDLSSNRFTGELPDEMSSL TQLQSLDLSSNGLYGSISVLSGLTSLTSLNISYNNFSGAIPVTPFFKTLSSSSYINNP NLCESYDGHTCASDMVRRTALKTVKTVILVCAVLGSITLLLVVVWILINRSRTLAGKK AMSMSVAGGDDFSHPWTFTPFQKLNFCVDNILECLRDENVIGKGCSGVVYRAEMPNGE IIAVKKLWKTSKEEPIDAFAAEIQILGHIRHRNIVKLLGYCSNKYVKLLLYNYIPNGN LQQLLKDNRSLDWDTRYKIAVGAAQGLAYLHHDCVPAILHRDVKCNNILLDTKYEAYL ADFGLAKLMNSPNYHHAMSRIAGSYGYIAPEYGYTTKITEKSDVYSYGVVLLEILSGR SAVEAVVGDSLHIVEWAKKKMGSYEPAVNILDPKLRGMPDQLVQEMLQTLGIAIFCVN PAPAERPTMKEVVAFLKEVKCSPEEWGKISQQPLIKPGSQQG</aaseq>

Gene Sequence

<dnaseqindica>3506..3891#240..3072#gtagcagcggcgacagtagcagcagcaacgcctccgctcgctcgatcgatcgatcgatccatctcctcgtctagctccatatgcgagctggggtgcggcttaagcaactccagctcaaagtaatcttctcactagcaagcaagctctctctcatgtcgtgaggtgtagattaggggggagatttgttcttcttttttggtctggttttttttgtggtttcttgatcgttttggggggtaatggcgcaccggggcgaccggttcttggtggtggtggtggtggtggtggtgttgggggtggtggtgcggccggcggcggcgctgtccgcggacgggaaggcgctgctgtcgctgctgccggcggcggcgccgtcgccggtgctgccgtcgtgggaccccaccgccgcgacgccgtgctcgtggcagggggtgacgtgctcgccgcagagccgggtggtgtcgctgtcgctgccgaacaccttcctcaacctgtcgtcgctgccgccgcagctcgcgtcgctgtcgtcgctccagctgctcaacctctccacctgcaacatctccggcgccatcccgccggcgtacgcgtcgctcgccgcgctccgcgtgctggacctctcgtcgaacgcgctctacggcgacatcccggcgtcgctcggcgcgctgtcggggctccagtacctgctcctcaactccaaccgcctcaccggcgccatcccgcgctccctcgccagcctcgccgcgctccaggtgctctgcgtccaggacaacctcctcaacggcaccatcccagcgtcgctcggcgcgctcaccgcgctccagcagttccgcgtcggcggcaacccggggctgtcgggccccatcccggcctcccttggcgcgctctccaacctcaccgtcttcggcgccgccgccaccgcgctgtccggcgccatcccggaggagctcggcaacctcgccaacctccagacgctggcattgtacgacaccggcgtgtccggcccgatccccgccgcgctcggcggctgcgccgagctgcgcaacctgtacctccacatgaacaagctcaccggcccgatacctccggagctcgggcggctgcaaaagctcaccagcctgctgctctggggcaacgccctgtccgggaggatcccgccggagctctccaactgctcggcgctcgtcgtgctcgacctctccggcaaccggctcgccggcgaggtgcccggggcgctcggccgcctcgccgcgctcgagcagctgcacctgtcggacaaccagctcgcggggcgcatcccggcggagctgagcaactgcagcagcctcacggcgctccagctcgacaagaacggcctgaccggcgccatcccgccgcagctcggcgagctcagggcgctgcaggtgctgttcctctggggcaacgcgctctccggcgcgataccgccgtcgctcggcaactgcaccgagctgtacgcgctcgacctgtccaggaaccgcctcgccggcggcatccccgacgaggtgttcgcgctgcagaagctcagcaagctgctcctcctcgggaacgcgctctccgggaggctcccgccgagcgtcgccgactgctcgtcgctggtgcgcctccggctcggcgagaaccagctcgccggcgagatacccagggagatcggcaagctgccgaacctggtgttcctggacctctactccaacaagttcaccggcgcgctccccggcgagctcgccaacatcacggtgctcgagctgctcgacgtccacaacaacagcttcacgggtgccatcccgccgcagttcggcgagctcatgaacctggagcagcttgacctgagcatgaacaagctcaccggcgagataccggcgagcttcggcaacttcagctacctcaacaagctcatcctcagcggcaacatgctctccgggacattgcccaagtcgattcgcaacctgcagaagctgaccatgctggagctgagcaacaacagcttctccggtccgataccgccggagattggcgcgctctcgagcctgagcattagccttgacctcagctcgaacaggttcaccggcgagctgccggatgagatgtccagcttgacgcagctgcagtcgctcgacctctccagcaatggcttgtatggcagcatctcagtgttgagtgggctcaccagcttgacatctctcaacatttcgtacaacaatttctccggcgcgatcccggtgacaccgttcttcaagacattgtcatcgagctcctacatcaacaatcccaacctctgcgagtcctacgacgggcacacttgtgcatcagacatggttcgcaggacggcactgaagaccgtcaagaccgtgatccttgtctgtgctgttctgggctcaatcactctgttgcttgttgtggtctggatcctgatcaacagaagcagaacactcgcgggcaagaaggcgatgagcatgtcggttgcgggtggcgatgacttctcgcacccgtggacgttcacgccgttccagaagctgaacttctgcgtcgataacatcttggagtgcctgagagatgagaatgtgatcggcaaaggttgctcaggtgttgtgtacagagctgagatgccgaatggggagatcatcgccgtgaagaagctgtggaagacatcgaaggaggagccaatcgacgcgttcgctgctgagattcagatattggggcacatcaggcaccggaacatcgtcaagctgcttggttactgctcaaacaagtatgttaagctcttgctctacaactacatccccaatggcaatctgcaacagctcctgaaggataacaggagcctggactgggatacccggtacaagatcgccgtcggcgcagcacaagggctggcctatctgcaccatgattgcgtcccggcgatactccaccgcgatgtcaagtgcaataatatactgcttgatacgaagtatgaggcatacttggctgactttgggctggccaagctgatgaactcccccaactatcatcatgctatgtcacgcatcgccggttcttatggatacattgctccaggcaagtgattcctacttcaagtatttatctgcatgctattttttcttcaaaatctagaaatatagtagtagtagaatgtagtgtacaagaccagcaacagttaatgccataggttaatgactctttgggtaatgctgttatctaagaaagaatctttgacctgcagttgcttctagtaatcttaaccttgctctgattccatgaccatgaccatgaccatgactagttgattgcttgtagcttaagcaggtgaaaccgatcagtctggctatctattaactgccattgcacaagtttctgaaatcacaagcatcaatgtccattgaagcttgttgacttatatactgtttgttgaaatgcctggcccaagattatgttgatatgcttaaaacatccaagaaatttatcctgacatacatttcctcattttcagagtatggctacaccacgaagatcaccgagaagagcgacgtgtacagctacggggtggtgctcctggagatcctgagcgggcggagcgcggtggaggcggtggtgggcgactccctccacatcgtggagtgggcgaagaagaagatggggagctacgagccagcggtgaacatcctggacccgaagctgcgcggcatgccggaccagctggtccaggagatgctgcagacgctggggatcgccatcttctgcgtgaacccggcgcccgcggagcggcccaccatgaaggaggtggtggccttcctcaaggaggtgaagtgctctcccgaggagtgggggaagatctcccagcagccgctcatcaagcccgggagccagcaaggttgacatgaacatcaagaacatggaacatgaacattgctgctggtgtagcagttgattcagtggctcagcaaggggttcaaggagtaggattttgataagatgcagcctagcttagcttgggttaggggggtggaaaaaaaatttcttgtacagctccaaatggcgttgcgttgcagctcattttggtgaactttgaatggggaaaaattccgcggttattttgtttgct</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0589800, RefSeq:Os06g0589800