Os06g0594200

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Revision as of 09:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0594200| Description = Disease resistance protein family protein| Version = NM_001187953.1 GI:297725036 GeneID:9266654| Length = 5809 bp| ...")
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Gene Name

Os06g0594200

Description

Disease resistance protein family protein

Version

NM_001187953.1 GI:297725036 GeneID:9266654

Length

5809 bp

Definition

Oryza sativa Japonica Group Os06g0594200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:24232098..24237906

Sequence Coding Region

24232098..24234436,24234708..24234999,24235235..24235758,24235910..24236179,24236989..24237720
,24237822..24237906

Expression

GEO Profiles:Os06g0594200

Genome Context

<gbrowseImage1> name=NC_008399:24232098..24237906 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:24232098..24237906 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaccatctcgaacgaagcgaacagatgccgatgccggcatcccgtgcagtgccaggggggcttgtctttcatcagagtaaagattggtggcagccggggatcgtggacgatcgaagcagtgacattctgcgctctccggccgctcaatcgccggcgccgggggggagatcgagcgatggagtcggtggccgtgaacgcggcgcggcgggtggtcagcaaggcgctgagcccgctgtccggagggttcgtggaggcgtgggtggccagcaaggagctcggccccaacgtcggcgccgtcaagatggagctgctgtacgcgcaggggatgctcgacaacgcccgtggcaccggcggcagggaggcccgcagccccgcgctgaggcagctgctcctggagctgcgtggcctcgcccacgacgcgtcgacgccgaggacgtgctcgacgagctcgactacttccgcatccaggacgagctcgacggcacctgcgaggccgccgacgagcacgccaagggctgcgtcgtccacaacctcttcctcaacactcgccatacagccctcagcgtcgcgagcaacctagtgctcctcccgtgcgctggtgatgatcaccctgacgctgacggtcggcggtcgggagaagacaagaaccgtcagatcggctcctcgtgtgctggtggtggtcaagtgatgaaccgtcagatcggctcgtcgccgtcgcgcactctccacgccgccgccgacgaggaggctgttgccagcaactgctgcatgcacaagctctctcccagtgctcgcggcaacacccatcacatcggaagccagttcctccgctgcacctgttcctgcggcagggtattgcagagggaggatacgatgaaaacaccaaagctgaagttcgatagggtggatctgtcccaaagaatgaagcgcattgtcgaacagctgaagccattgtgtgccaaagtctctaccatactcaatctagagttgttggaatcaaatcgcagcattggccagtacattgccatgagtctcaatgccgagttttccaagaaaccagggcatgcacctgttcttccaagcggggggatagggaagacaactctcgcacagtatatatacaaagaagtacataactactttgatgttaccgtctgggtttgtgtaactcccaatttcaatgtgtatagattgaaagaagacattgccaagtcgatccctcaactcaaagatgagaaaaacagtggtccgcatgatttgattgtgcaaagcttgggatcaaagtttttacttgtcttggatgatatgtggaattgtggccacgaggatgaatggaaatatctattagcatctctcaaaaaaggacaaaccaagggaaacataattctagtcaccactcattttctagcagtggtagaaatggttaaaacaattgatagtccaatacaactaaaagggcttgatcctcaagagttttgggaattattcaaagcatctgtgtttggtgatgagaaatcagcaaatgatcatgctaatttacttgagactggaaaaatgatatcaaaaaaatctgaagggttcccctttggcagcgaaaacagttgggaggatcaaaacaagaaaattgaagacattggattgagccgattgaatgatttggttagctatggattttttgaaaaacatgtagaagatgggtcttcatactacgttatgcatgacctactacatgagttagcattgaaggtttcatcgtatgaatgtcttaccatatgtagttcaaatgtcaaatctatacaaattctaccatctataagacacttatctattgtggttgatgacatggacgtaaatgatagagtgacttttgaaaacatcaagaaggatttcatcacattaaaattaagtctacccaacatcatatcaagattttaccacttgagaatccttgatgtacgacaatgcaagggtcattttggtttaccaagagatatgaataaccttgtaaaactgcggcattttgttgtccaagatgataaactctactctgacattgctaatgtgggtaagataaagtgtttacaagaattaaggagatttgaggtcaaaagacaagttaaggcatttgcactaagccaaatagggcagctggatgagctaaaaggatcgttgggaatttatgatcttgaaaatgcaaaggcggcagaggaggcaaaacttttaaacaaaagtcacttacacaagttaatattagattggaatgttaaccattctacaaaggattattcacaagaagaacatattcttgaaaatcttagaccacatagcaatcttcgggagctacatattcaagggcatgggggtaccacttgcccttcatggttgggtcctaacttatctatcaaaggtttgcaatcactttgtataaacggtgtatgttgggacaagtttccacctctaggggggttgtggttagttaacaagcatggtgaaaaattcctggcttgtgcaagtggccgcagcttccagtatttaaaaaggttagagctagttgctataccaagactagcaaaatgggccggaaatgatgcttgttgtgtgctctccctgttggaggagtttattgtaagagagtgcccagaactcatagagttgccattttcacattccacttgtccttggtcaagacaggagatgaacttgtctcaattctccagactacagaaccttgagattgcaaaatgcccaaagctattaccattgtctccccttccttggacaagctctccatgccatgttctgattaaagaagttggatcgcattttcatctcttggattatcagagaaacaaccaatctgaacaagggttacaaattgagggaaaggatggccctctggatagtacattctggaagttattggctttaagtaatcttacagaactaagagagttgaagatgaagaaatgccctcctttgcctctcaaacatcttaagttgctatcagctttgaggaggctctccattactgattcaggtattgccttgttgccgactgattgtgaaagcacagtcacatatcattttctagttgagcaactcgagatctatgagtgcagtgctagtgggatagaaatgacacaactgctatcttatttccccaagctcatgaacttgagaatagaaaaatgtcaaaagataacagggcttggtgtggcagggcaagagatgatggcaacgctagcatctccaccatcactttcttataataagtctgaggatgcacagattgggaatgatcagcaacaaccaagaggagacaatggaatagcatcggtggttacaggactactgctcttgcctcaccaactacagaacttggacatcagacactgctcaaagctgatcctgcagctcgattcatttgtaggcgacacaacacgcaacctaataagaggtgtaggaggaggattacaatacctgcgctccctccaatcattgtgtataaagcattgtcccaattttctctcctcctactcaccctccttgtcttgtttcccatttccatcctcccttcaagatctggctattattgattgtgtgagaggcatggaaactctggtacaaaacctcagctctctcactagattgtccatatgggactttggggatttaagaagcgggagcatgtgttccctcctcacccaaggccaccttagagtgctggctgtccataaaactcccgaattctttgttgggtccaagccatcggggctgcaacagctctacatggatgacatcgtaggggtatttgttgagcctacttgcaggcttctctcttcatcactcaccaagttaagcttaagcatgaaccacaaggtagagcgcttcaccaaggagcaaaacatggcccttcagctgctctcctccctcgaggtccttatatttgtgcaatgctcgaagctgcagtctctccctgctgggttacatagactcaccagtctcaagagattagagatcgcatactgtccaaacattcattcgctgcccaagggctgttttccgagttcactagaagtactacatgtttatgaaagccaaagcgaagagctcaaaaggcagtgccgcaagctaaaaggaacaattgcaatcatcgaagatgaagactacttggaactggtaacaaatactcacttatttgacttagcccagttcacgttttgtttggcacaacactag</cdnaseq>

Protein Sequence

<aaseq>MDHLERSEQMPMPASRAVPGGLVFHQSKDWWQPGIVDDRSSDIL RSPAAQSPAPGGRSSDGVGGRERGAAGGQQGAEPAVRRVRGGVGGQQGARPQRRRRQD GAAVRAGDARQRPWHRRQGGPQPRAEAAAPGAAWPRPRRVDAEDVLDELDYFRIQDEL DGTCEAADEHAKGCVVHNLFLNTRHTALSVASNLVLLPCAGDDHPDADGRRSGEDKNR QIGSSCAGGGQVMNRQIGSSPSRTLHAAADEEAVASNCCMHKLSPSARGNTHHIGSQF LRCTCSCGRVLQREDTMKTPKLKFDRVDLSQRMKRIVEQLKPLCAKVSTILNLELLES NRSIGQYIAMSLNAEFSKKPGHAPVLPSGGIGKTTLAQYIYKEVHNYFDVTVWVCVTP NFNVYRLKEDIAKSIPQLKDEKNSGPHDLIVQSLGSKFLLVLDDMWNCGHEDEWKYLL ASLKKGQTKGNIILVTTHFLAVVEMVKTIDSPIQLKGLDPQEFWELFKASVFGDEKSA NDHANLLETGKMISKKSEGFPFGSENSWEDQNKKIEDIGLSRLNDLVSYGFFEKHVED GSSYYVMHDLLHELALKVSSYECLTICSSNVKSIQILPSIRHLSIVVDDMDVNDRVTF ENIKKDFITLKLSLPNIISRFYHLRILDVRQCKGHFGLPRDMNNLVKLRHFVVQDDKL YSDIANVGKIKCLQELRRFEVKRQVKAFALSQIGQLDELKGSLGIYDLENAKAAEEAK LLNKSHLHKLILDWNVNHSTKDYSQEEHILENLRPHSNLRELHIQGHGGTTCPSWLGP NLSIKGLQSLCINGVCWDKFPPLGGLWLVNKHGEKFLACASGRSFQYLKRLELVAIPR LAKWAGNDACCVLSLLEEFIVRECPELIELPFSHSTCPWSRQEMNLSQFSRLQNLEIA KCPKLLPLSPLPWTSSPCHVLIKEVGSHFHLLDYQRNNQSEQGLQIEGKDGPLDSTFW KLLALSNLTELRELKMKKCPPLPLKHLKLLSALRRLSITDSGIALLPTDCESTVTYHF LVEQLEIYECSASGIEMTQLLSYFPKLMNLRIEKCQKITGLGVAGQEMMATLASPPSL SYNKSEDAQIGNDQQQPRGDNGIASVVTGLLLLPHQLQNLDIRHCSKLILQLDSFVGD TTRNLIRGVGGGLQYLRSLQSLCIKHCPNFLSSYSPSLSCFPFPSSLQDLAIIDCVRG METLVQNLSSLTRLSIWDFGDLRSGSMCSLLTQGHLRVLAVHKTPEFFVGSKPSGLQQ LYMDDIVGVFVEPTCRLLSSSLTKLSLSMNHKVERFTKEQNMALQLLSSLEVLIFVQC SKLQSLPAGLHRLTSLKRLEIAYCPNIHSLPKGCFPSSLEVLHVYESQSEELKRQCRK LKGTIAIIEDEDYLELVTNTHLFDLAQFTFCLAQH</aaseq>

Gene Sequence

<dnaseqindica>3471..5809#2908..3199#2149..2672#1728..1997#187..918#1..85#atggaccatctcgaacgaagcgaacagatgccgatgccggcatcccgtgcagtgccaggggggcttgtctttcatcagagtaaaggtgcagagcagaatggaatcaaaacgaaagcttaagcttgtgctttgccactactattctctgcgcattgtcgtctctttcgttcctgcacattcttggagattggtggcagccggggatcgtggacgatcgaagcagtgacattctgcgctctccggccgctcaatcgccggcgccgggggggagatcgagcgatggagtcggtggccgtgaacgcggcgcggcgggtggtcagcaaggcgctgagcccgctgtccggagggttcgtggaggcgtgggtggccagcaaggagctcggccccaacgtcggcgccgtcaagatggagctgctgtacgcgcaggggatgctcgacaacgcccgtggcaccggcggcagggaggcccgcagccccgcgctgaggcagctgctcctggagctgcgtggcctcgcccacgacgcgtcgacgccgaggacgtgctcgacgagctcgactacttccgcatccaggacgagctcgacggcacctgcgaggccgccgacgagcacgccaagggctgcgtcgtccacaacctcttcctcaacactcgccatacagccctcagcgtcgcgagcaacctagtgctcctcccgtgcgctggtgatgatcaccctgacgctgacggtcggcggtcgggagaagacaagaaccgtcagatcggctcctcgtgtgctggtggtggtcaagtgatgaaccgtcagatcggctcgtcgccgtcgcgcactctccacgccgccgccgacgaggaggctgttgccagcaactgctgcatgcacaagctctctcccagtgctcgcggcaacacccatcacatcggtaaacactttccatgcctctcttttgcaccttaacatgacggtacggtggtgataactctagagtacaattcaattctaatttatacttccagtatgacgacctaacggtgtagattgattccttttccctatttaatgagtaaaactttttaaaacatttttttttgaaaaaaaaggcaaatatgtctctctgggtaaacaaccagattatagtgaagaaataagtagtgtggctctatcctttcccgctgatcggagttgcgtttagccgccatagtaaacctagctgcagtttttgttttgtttttttctctcttccccccttggcataagcctatatagctgattgcattgtgtaataagaactcttttccttctaatatattgacgtgcaatctttttgcgcgttcgtgaaaaaaaaatagtgaagaaataaagaacacaccctgctaaacagcccttgctcttgaccatatatacatcagctcgtcgccgtgtctagcaatgagccgtgaggctcggccaaaaggacgagcgcacggcgagcctgccagaccgccgcgaacgccaacctcttggccgggctcagccacctcgctgctcgtcaaatcgctctagcaacgttcttccctagtgcacgatgagatccagtactaaatactcctcccaattggattaaatataaactataaattgctgtaaaatccatctctaattttctaccaaattcctaacatgcccttctatatactgctaggatattgtactgtacaagttttctaactctagcgtcatgtgcacatgcaggaagccagttcctccgctgcacctgttcctgcggcagggtattgcagagggaggatacgatgaaaacaccaaagctgaagttcgatagggtggatctgtcccaaagaatgaagcgcattgtcgaacagctgaagccattgtgtgccaaagtctctaccatactcaatctagagttgttggaatcaaatcgcagcattggccagtacattgccatgagtctcaatgccgagttttccaagaaaccagggcatgcacctgttcttccaagcggttttgctatcagtcggcctatgaccacttcagagtttacagatcctacagtttatgggagaatggatgaaaaaaaatacaactattaaaaacattactcatggtgattactgtgacaaggacctgaccatcattccaattgttggtccaggggggatagggaagacaactctcgcacagtatatatacaaagaagtacataactactttgatgttaccgtctgggtttgtgtaactcccaatttcaatgtgtatagattgaaagaagacattgccaagtcgatccctcaactcaaagatgagaaaaacagtggtccgcatgatttgattgtgcaaagcttgggatcaaagtttttacttgtcttggatgatatgtggaattgtggccacgaggatgaatggaaatatctattagcatctctcaaaaaaggacaaaccaagggaaacataattctagtcaccactcattttctagcagtggtagaaatggttaaaacaattgatagtccaatacaactaaaagggcttgatcctcaagagttttgggaattattcaaagcatctgtgtttggtgatgagaaatcagcaaatgatcatgctaatttacttgagactggaaaaatgatatcaaaaaaatctgaagggttcccctttggcagcgaaaacagttgggaggttactgaaaaatcaccttgatttggaacattggacaagtgtcctggaaagtaaagaatgggaattacaaaccggtgagaatgatattatgccagcattaaagcttagctacgattatctcccttttcatctgcaacaatgttttacatattgtgctatgttccctgaagaccataaatttgctagtgatgagataattcacttatggataggactagacatcctacattcacaggatcaaaacaagaaaattgaagacattggattgagccgattgaatgatttggttagctatggattttttgaaaaacatgtagaagatgggtcttcatactacgttatgcatgacctactacatgagttagcattgaaggtttcatcgtatgaatgtcttaccatatgtagttcaaatgtcaaatctatacaaattctaccatctataagacacttatctattgtggttgatgacatggacgtaaatgatagagtgacttttgaaaacatcaagaaggatttcatcacattaagtaagagactagatgttggaaaactgcactcattgatgctatttggacaataccatggaagctttatcacccctttcagtgatttgttaagaaaagcacgtgcactccgcatagtcttgttgtctatgccatcttatgctatagtcagtatgttgcataacttttcaaaacttgtccatctacgctacttaaggatcaatggaggaaaattttcagaattaagtctacccaacatcatatcaagattttaacacttgaggaaaattttcagaattaagtctacccaacatcatatcaagattttaccacttgagaatccttgatgtacgacaatgcaagggtcattttggtttaccaagagatatgaataaccttgtaaaactgcggcattttgttgtccaagatgataaactctactctgacattgctaatgtgggtaagataaagtgtttacaagaattaaggagatttgaggtcaaaagacaagttaaggcatttgcactaagccaaatagggcagctggatgagctaaaaggatcgttgggaatttatgatcttgaaaatgcaaaggcggcagaggaggcaaaacttttaaacaaaagtcacttacacaagttaatattagattggaatgttaaccattctacaaaggattattcacaagaagaacatattcttgaaaatcttagaccacatagcaatcttcgggagctacatattcaagggcatgggggtaccacttgcccttcatggttgggtcctaacttatctatcaaaggtttgcaatcactttgtataaacggtgtatgttgggacaagtttccacctctaggggggttgtggttagttaacaagcatggtgaaaaattcctggcttgtgcaagtggccgcagcttccagtatttaaaaaggttagagctagttgctataccaagactagcaaaatgggccggaaatgatgcttgttgtgtgctctccctgttggaggagtttattgtaagagagtgcccagaactcatagagttgccattttcacattccacttgtccttggtcaagacaggagatgaacttgtctcaattctccagactacagaaccttgagattgcaaaatgcccaaagctattaccattgtctccccttccttggacaagctctccatgccatgttctgattaaagaagttggatcgcattttcatctcttggattatcagagaaacaaccaatctgaacaagggttacaaattgagggaaaggatggccctctggatagtacattctggaagttattggctttaagtaatcttacagaactaagagagttgaagatgaagaaatgccctcctttgcctctcaaacatcttaagttgctatcagctttgaggaggctctccattactgattcaggtattgccttgttgccgactgattgtgaaagcacagtcacatatcattttctagttgagcaactcgagatctatgagtgcagtgctagtgggatagaaatgacacaactgctatcttatttccccaagctcatgaacttgagaatagaaaaatgtcaaaagataacagggcttggtgtggcagggcaagagatgatggcaacgctagcatctccaccatcactttcttataataagtctgaggatgcacagattgggaatgatcagcaacaaccaagaggagacaatggaatagcatcggtggttacaggactactgctcttgcctcaccaactacagaacttggacatcagacactgctcaaagctgatcctgcagctcgattcatttgtaggcgacacaacacgcaacctaataagaggtgtaggaggaggattacaatacctgcgctccctccaatcattgtgtataaagcattgtcccaattttctctcctcctactcaccctccttgtcttgtttcccatttccatcctcccttcaagatctggctattattgattgtgtgagaggcatggaaactctggtacaaaacctcagctctctcactagattgtccatatgggactttggggatttaagaagcgggagcatgtgttccctcctcacccaaggccaccttagagtgctggctgtccataaaactcccgaattctttgttgggtccaagccatcggggctgcaacagctctacatggatgacatcgtaggggtatttgttgagcctacttgcaggcttctctcttcatcactcaccaagttaagcttaagcatgaaccacaaggtagagcgcttcaccaaggagcaaaacatggcccttcagctgctctcctccctcgaggtccttatatttgtgcaatgctcgaagctgcagtctctccctgctgggttacatagactcaccagtctcaagagattagagatcgcatactgtccaaacattcattcgctgcccaagggctgttttccgagttcactagaagtactacatgtttatgaaagccaaagcgaagagctcaaaaggcagtgccgcaagctaaaaggaacaattgcaatcatcgaagatgaagactacttggaactggtaacaaatactcacttatttgacttagcccagttcacgttttgtttggcacaacactag</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0594200, RefSeq:Os06g0594200