Os06g0597200

From RiceWiki
Revision as of 09:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0597200| Description = Similar to DNA-binding protein phosphatase 2C| Version = NM_001064522.1 GI:115468775 GeneID:4341433| Length = 4546 b...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0597200

Description

Similar to DNA-binding protein phosphatase 2C

Version

NM_001064522.1 GI:115468775 GeneID:4341433

Length

4546 bp

Definition

Oryza sativa Japonica Group Os06g0597200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:24382604..24387149

Sequence Coding Region

24382729..24382842,24385122..24385331,24385504..24385715,24386296..24386863

Expression

GEO Profiles:Os06g0597200

Genome Context

<gbrowseImage1> name=NC_008399:24382604..24387149 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:24382604..24387149 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaagagcataggcttggcggcggcggcggcggaggcggaggcggggggaggccgccgatcccgggggcggcggggaggaagcttccggggctctcgcggcacgcctcgttcgtgaggagtcctgcaaacagtacaaaatctggaactgagaaaacttttgaaaacatggatgctgttgcatatatgcctgttgtaaggtctggaggttgggctgatattgggtcaaggcacacaatggaggatgtctttatttgttctgataacctcatgaaagagtttggagttgaaagttttgaagatggtccgagcgcattttatggggtttttgatgggcatggtggaaagcacgctgctgactttgtgtgcagcaatttggcaaggtttatcgttgaggatgaggattttccaagggagatagagaaagctctgtcctcagcgttcttacagactgatgctgctttcgcagatgcttgttctgtgaactcctctcttgcttctggcacaactgctcttgctgctcttgtggttgggaggtcacttctggtagcaaatgctggtgattgtagagcagtactttgttgtcgtggaaaagccattgaaatgtccagggatcacaagccttcttgcaacagagagaaggttcgcattgaagcctctggtggttatgtttatgatggctacctgaatgggcagcttaatgttgcgcgggcaataggagactggcacatggaaggaatgaaggcatgtgatggtcttggacctcttagtgctgagcctgaggtgatgatcaggaatctcactgaggaggatgaattcctcatcatcggttgtgatgggatctgggacgtattccgcagccaaaatgcggtagactttgcacgccgaaagctccaggagcacaatgatcctgttacctgttgtaaagaacttgttgatgaggccatcaagaggaagagcggcgacaacctttctgttgttgtcatctgcttcaactctcggccgcctcctgtcctaacaactccaaggcctcgtgtacagaggagtatatctgcagaaggcctgagggagttgcaaagctttcttgatagcttggctgattga</cdnaseq>

Protein Sequence

<aaseq>MEEHRLGGGGGGGGGGGRPPIPGAAGRKLPGLSRHASFVRSPAN STKSGTEKTFENMDAVAYMPVVRSGGWADIGSRHTMEDVFICSDNLMKEFGVESFEDG PSAFYGVFDGHGGKHAADFVCSNLARFIVEDEDFPREIEKALSSAFLQTDAAFADACS VNSSLASGTTALAALVVGRSLLVANAGDCRAVLCCRGKAIEMSRDHKPSCNREKVRIE ASGGYVYDGYLNGQLNVARAIGDWHMEGMKACDGLGPLSAEPEVMIRNLTEEDEFLII GCDGIWDVFRSQNAVDFARRKLQEHNDPVTCCKELVDEAIKRKSGDNLSVVVICFNSR PPPVLTTPRPRVQRSISAEGLRELQSFLDSLAD</aaseq>

Gene Sequence

<dnaseqindica>126..239#2519..2728#2901..3112#3693..4260#tatgttcgctgcgacgacgcagctccaaatcggaaccctaaccctagtagtcctcctcctcccgcgctcgatccgaggtcgtcatcccgctgattccgaggctctctactgcggcggcggcggcgatggaagagcataggcttggcggcggcggcggcggaggcggaggcggggggaggccgccgatcccgggggcggcggggaggaagcttccggggctctcgcggcacgcctcgttcgtgagtaacccccgccctaatcttagctctttctcggcgttgtaaacttggttttggtgtggtttggttgggtgcttgctctgttcttcgctgggaaggcggcgaggtgtgatatatatatattttttttttggctgtggaggatttggggataatgtcggcatgatgtgatgggcgatggagtctaattcggggatgaggggagtgaggagaaggaatcttgggctctgaaattgccggtacatccttgttgtacttgggtagtacaccaacctggggcgagatgtttggatccgtgcggtttatgtggaagcagcgtattgggaaacattgccttgggttgtatgaaatggttggttttatcaaactgtacacagagtgtcctagaatgttttgcataaactatgttagtgctttgtactatcagtgtattttggcggcctgtattcttttttgcagaatttggtggtgaatttgatgttttaactttgctaactcattaggtatttcttccttgaaaaattgaggcaacaatttttcagggcactgtaaaagtgaggggaaaggggatcagactggtaattttctgtatgtgtcatgaaagtgtcttaattcttttggtactttttgctcttgtcctgactacatggacccataacatcattgaaaagaaataaattgaaaggtacttcgatgtctctgctcaacagtaattgcccatttaagttgtccacagtcaaaaacagcaaagctgttctaaatgatattctgtactccttccagtttcaaaattcttgaccttttagacataatctcacataccaaggagtgatttattagggtgcctaatccttgttttgcccatattaaatacggtcttgtcctaatagaaatcagaaactcgtgctgttccaagtggtttgggcctatcattagcgtctgtgcatgccgggttcgagttctattgaggctattttttttaaaaaaaaatcatagcgttatcttggtaatttttggctcgctcgcgcttgctttagcacacaacggttgctacatcatcactgtcatcacacccgctctcaacgagcaagcggtcgccgagagcacggcgccagcaagcagcccaagaagccaacaagcgattaattaggagatgagacaacggcccgcgtgtgatgtttaatgacatacacgacgctagaaacaatgcgttggatttttatgcatgcatgcaggagcaagcaggtccaagatactttgcttcaagatctaaaacgtcaactattttgatactggagggagtaaggggttggcaaaagtggtaattgacttgatatcattgccttgctgattttggtttcaatctcgtcattctttccggtattgtttagattataacagtggatcctttagatctacactgcacattgttttttcaatagaagctagatatggtgatacacatagtatgcttccataacaaaatatatgcacttgcctgtccatttgtagttatgtacttgtctgacactgcatgttgcttggtaatttctagtagatcacattatttgagcaaggagggaaccattataatgtcacacttaattcacatgggaggggacaagaatagttgtttcatagttacaactaattgcaccgcttttgggcatgtggtagggcaaacttaactatagttagtatttgctataaaaattttctcttcaatccttgcaattaaatcattttaattgggcatccacggacgagcctaggcagccattgggccatggatcagccagtgagtatgagtgatattcactttcggaagaaccgaatgtattccctctgtcccaaattataatagatatattttttacacaatctttaataacatactttgatcattaatttatttcatattatgtcatcaacaactataaaattattatcacatgaaaatgttttaaaatatgaatctaatgatataacatacataatacttggtgtagatattgttagtgtaattattagtcaaaagttaccgagtttgatttttctaaaaataagagtgctctacaatttgggacagagggagtatatgacagtgcaatttttgtttttgccttttgttggatcaacattgttaatatatgtatgagataatctggaaaccctttttgggtcatggtagtgcaacttcaaaatgaaagagcatacaacatagattctgtgcagtatggttaattatttttttgtcatgcttggcattggttttgcaggtgaggagtcctgcaaacagtacaaaatctggaactgagaaaacttttgaaaacatggatgctgttgcatatatgcctgttgtaaggtctggaggttgggctgatattgggtcaaggcacacaatggaggatgtctttatttgttctgataacctcatgaaagagtttggagttgaaagttttgaagatggtccgagcgcattttatggggtatgcttttattctactgtattcaaggcccagacttgtttcttgatgtatgcgatatatgttagccatttcatgactagactaacaataacaactttcctttatgagtaatttcatgcccctggcaggcattttatttatatatacccttcatatgattttaatgtcttaggtttttgatgggcatggtggaaagcacgctgctgactttgtgtgcagcaatttggcaaggtttatcgttgaggatgaggattttccaagggagatagagaaagctctgtcctcagcgttcttacagactgatgctgctttcgcagatgcttgttctgtgaactcctctcttgcttctggcacaactgctcttgctgctcttgtggttgggaggtattggcctaacttcttaaactgtaaagtgttgtactgactactgagttcctggcagcatatctgtttaactactatttgatgattgtcattacttattaatggtaggagccattccccacccccaccctgttatggccatgcagttcctgtttcgttgcctgtggccttgtgcaaattataagtcttcagtgcactcaattgtgcatgaacagacaggggcttcaaaacttatttctctcatgaatagacagcattgattcttgatctttgtttctttgcaatcgtgtgaagtgcatctatagcctttctattttgactatcttgtcggccacggttaatatcagcgtgctttagcctattgcatgctacagtattctctttcatgaaagcaattatatagtataaattttggtacccaaaaatgggactgtgtgcccccttttatagtccattatgtagttctcctttctgtctatttcagtctctgctttctgtcttgctatgatctctgagagaattatgcttccacttgggataaccaactttcttgtcttaaccgttttgccatttttcataggtcacttctggtagcaaatgctggtgattgtagagcagtactttgttgtcgtggaaaagccattgaaatgtccagggatcacaagccttcttgcaacagagagaaggttcgcattgaagcctctggtggttatgtttatgatggctacctgaatgggcagcttaatgttgcgcgggcaataggagactggcacatggaaggaatgaaggcatgtgatggtcttggacctcttagtgctgagcctgaggtgatgatcaggaatctcactgaggaggatgaattcctcatcatcggttgtgatgggatctgggacgtattccgcagccaaaatgcggtagactttgcacgccgaaagctccaggagcacaatgatcctgttacctgttgtaaagaacttgttgatgaggccatcaagaggaagagcggcgacaacctttctgttgttgtcatctgcttcaactctcggccgcctcctgtcctaacaactccaaggcctcgtgtacagaggagtatatctgcagaaggcctgagggagttgcaaagctttcttgatagcttggctgattgacatgaggcttcttccttgatagaagcctgacatactgtcgctagtgtacttccattgcttagcatggaatttttaggtttagtgcggctattccaaggcttaatgccagctatctcacaaattctctgagatagcagctgttgagtgattctggtgttgtaatgtattatgcggctaattctatctgcagtttaagtatttattggttcagggatatgctgtcttaaagagtctggaattatcagggaacatttctaagatatctgaaatggcgagtgatgttgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0597200, RefSeq:Os06g0597200