Os06g0604300

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Revision as of 09:25, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0604300| Description = Phospholipase D| Version = NM_001064551.1 GI:115468833 GeneID:4341468| Length = 2980 bp| Definition = Oryza sativa ...")
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Gene Name

Os06g0604300

Description

Phospholipase D

Version

NM_001064551.1 GI:115468833 GeneID:4341468

Length

2980 bp

Definition

Oryza sativa Japonica Group Os06g0604300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:24798943..24801922

Sequence Coding Region

24799022..24799129,24799238..24801212,24801302..24801747

Expression

GEO Profiles:Os06g0604300

Genome Context

<gbrowseImage1> name=NC_008399:24798943..24801922 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:24798943..24801922 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctcacctgctgatgcacggcacgctcgacgccaccatcttcgaggccaccaacctcaccaaccccacccgcctcaccggcaacgcccccgagggcttccgcaagtggtgggaagggctggagaacgggttggagaagacgaccgggcttggccccggcgggacgaggctgtacgcgacggtggacctcggcagggcgcggctcggccggacgcgggtgatcgacgacgagccggtgagcccgcggtgggacgagcgcttccacttctactgcgcccacttcgccgagaacgtcgtcttctccgtcaaggtcgcgctgtccgtcgatgccaagctcatcggccgcgcctacctccccgtcagggacctcctgtccggcgaggccgtcgagcgcaagctcgacatcctcggcgacgacaagaagaagctcccccacggtccgaccatccacgtccggctgcagttcaaggacgtggccgccgacggcggcgggaagtggtggggcggcggcgtcggcgacgcggcgtaccccggcgtgccgtgcacctacttcaagcagcacgccgggtgcagggtcaccctgtaccaggacgcgcacgcgccggacacgttcgcgccgaggatcccgctcgccggcggcgcgcactaccagcaggggcggtgctgggaggacgtgttcgacgccatcagcaacgccaagcacctcatatacatcaccggctggtcggtgttcaccgacatcacgctcatccgcgacccgtcccggcagcgccccggcggcgacgccaccatcggcgagctcctcaagcgcaaggccagcgagggcgtccgcgtgctcatgctggtctggaacgacgtctcctccatccaggcgctccacgccatcggcatcaagctcagcgtcgcgcagacgcacgacgaggacacgctcgcctacttcgaggactccgacgtgcactgcgtcctctgcccgcggcaagccgacgccgccgccggcagcagcttcatcatgggcacgaaggtctcactcttggccacccaccaccagaagaccgtcatcgtcgaccacgacatgccggccggcaccggcggcggcggctccgacatccgctgcatcgtcagcttcgtcggcggcctcgacctctgcgacggccgctacgacacgcagtcccactccctcttccggacgctcgacgccgcgcaccacaaggacttccaccagccgagcatcgacgacgccgagctcgccaagggcgggccgagggagccatggcacgacatccactccaagctcgagggccccatcgcctgggacgtcctctacaacttcgagcagcggtggcggaagcagagcggccacgccgacctcctcgtcaacctcaccgccctcgagcacctcatcacgccgccgtccccggtgaagctccccggcaccaacaacgacgaccaccacgacgacgcatggaacgtgcagctcttccgctccatcgacggcggcgcgtgcgacggcttcccgagcagcccggaggcggcggcgcgcctcgacctcgtgagcgggaagaacaacgtgatcgagcggagcatccaggacgcgtacatccacgccatccgccgcgccagggacttcatctacatcgagaaccagtacttcatcgggagctcctacgggtggaggcccggcggcggcgtcaggccggaggacgtcgaggcggtgaacctgatcccgagggagctctccctcaagatcgtgagcaagatcgccgccggcgagcggttcgccgtctacgtcgtggtgccgatgtggcccgagggccaccctggcaacgaggccatgcaggccatcctcgactggcagaggaggacgatggagatgatgtactacgacatcgccgtcgcgctcaaggccaatcacagcgacgccgacccgagggattacctcaccttcttctgcttggggaacagggaggccaagagccatggcgagtacgtgcctgcacatcgcccggatcaagacacagactacgccaaggcgcagaacgcgcgccgcttcatgatctatgtccactccaagatgatgatagttgatgatgagtacatcatcgtcgggtcggccaacatcaaccagcggtcgatggacggcgggcgggactcggagatcgccatgggagcgttccagccacaccacctgaacgtcaatgggcaggctgcgagaggccagatccatggcttccggatgtcgctgtggtacgagcacctggggatgctgcacgacgacttcgtgcacccggggagcctggagtgtgtccggagagtgaacgcgatggccgacaggcactggcagctgtacgccggcgaggagctccacggcgacctccccggacacctgctcacctacccggtcgccgtcgagaaggacggcggcgccgtgacggcgctcccgggcgccgagttcttcccggacacggaggcgaaggtgatcgggacattggcgtcgtcggcgtacatgatcccctacctcacgtcgtag</cdnaseq>

Protein Sequence

<aaseq>MAHLLMHGTLDATIFEATNLTNPTRLTGNAPEGFRKWWEGLENG LEKTTGLGPGGTRLYATVDLGRARLGRTRVIDDEPVSPRWDERFHFYCAHFAENVVFS VKVALSVDAKLIGRAYLPVRDLLSGEAVERKLDILGDDKKKLPHGPTIHVRLQFKDVA ADGGGKWWGGGVGDAAYPGVPCTYFKQHAGCRVTLYQDAHAPDTFAPRIPLAGGAHYQ QGRCWEDVFDAISNAKHLIYITGWSVFTDITLIRDPSRQRPGGDATIGELLKRKASEG VRVLMLVWNDVSSIQALHAIGIKLSVAQTHDEDTLAYFEDSDVHCVLCPRQADAAAGS SFIMGTKVSLLATHHQKTVIVDHDMPAGTGGGGSDIRCIVSFVGGLDLCDGRYDTQSH SLFRTLDAAHHKDFHQPSIDDAELAKGGPREPWHDIHSKLEGPIAWDVLYNFEQRWRK QSGHADLLVNLTALEHLITPPSPVKLPGTNNDDHHDDAWNVQLFRSIDGGACDGFPSS PEAAARLDLVSGKNNVIERSIQDAYIHAIRRARDFIYIENQYFIGSSYGWRPGGGVRP EDVEAVNLIPRELSLKIVSKIAAGERFAVYVVVPMWPEGHPGNEAMQAILDWQRRTME MMYYDIAVALKANHSDADPRDYLTFFCLGNREAKSHGEYVPAHRPDQDTDYAKAQNAR RFMIYVHSKMMIVDDEYIIVGSANINQRSMDGGRDSEIAMGAFQPHHLNVNGQAARGQ IHGFRMSLWYEHLGMLHDDFVHPGSLECVRRVNAMADRHWQLYAGEELHGDLPGHLLT YPVAVEKDGGAVTALPGAEFFPDTEAKVIGTLASSAYMIPYLTS</aaseq>

Gene Sequence

<dnaseqindica>80..187#296..2270#2360..2805#cacaccattgttttgcgagcttcttcccagccttgtcaagtgcacacagccacacactgaaactgaaggagcagcagcaatggctcacctgctgatgcacggcacgctcgacgccaccatcttcgaggccaccaacctcaccaaccccacccgcctcaccggcaacgcccccgagggcttccgcaaggtcactcgtcgatgccatccatagcgatcatccacctcgccgacattttttccctgattcttgctgtgtttctgaatctttgtgcttggttggtgttggtgtttgcagtggtgggaagggctggagaacgggttggagaagacgaccgggcttggccccggcgggacgaggctgtacgcgacggtggacctcggcagggcgcggctcggccggacgcgggtgatcgacgacgagccggtgagcccgcggtgggacgagcgcttccacttctactgcgcccacttcgccgagaacgtcgtcttctccgtcaaggtcgcgctgtccgtcgatgccaagctcatcggccgcgcctacctccccgtcagggacctcctgtccggcgaggccgtcgagcgcaagctcgacatcctcggcgacgacaagaagaagctcccccacggtccgaccatccacgtccggctgcagttcaaggacgtggccgccgacggcggcgggaagtggtggggcggcggcgtcggcgacgcggcgtaccccggcgtgccgtgcacctacttcaagcagcacgccgggtgcagggtcaccctgtaccaggacgcgcacgcgccggacacgttcgcgccgaggatcccgctcgccggcggcgcgcactaccagcaggggcggtgctgggaggacgtgttcgacgccatcagcaacgccaagcacctcatatacatcaccggctggtcggtgttcaccgacatcacgctcatccgcgacccgtcccggcagcgccccggcggcgacgccaccatcggcgagctcctcaagcgcaaggccagcgagggcgtccgcgtgctcatgctggtctggaacgacgtctcctccatccaggcgctccacgccatcggcatcaagctcagcgtcgcgcagacgcacgacgaggacacgctcgcctacttcgaggactccgacgtgcactgcgtcctctgcccgcggcaagccgacgccgccgccggcagcagcttcatcatgggcacgaaggtctcactcttggccacccaccaccagaagaccgtcatcgtcgaccacgacatgccggccggcaccggcggcggcggctccgacatccgctgcatcgtcagcttcgtcggcggcctcgacctctgcgacggccgctacgacacgcagtcccactccctcttccggacgctcgacgccgcgcaccacaaggacttccaccagccgagcatcgacgacgccgagctcgccaagggcgggccgagggagccatggcacgacatccactccaagctcgagggccccatcgcctgggacgtcctctacaacttcgagcagcggtggcggaagcagagcggccacgccgacctcctcgtcaacctcaccgccctcgagcacctcatcacgccgccgtccccggtgaagctccccggcaccaacaacgacgaccaccacgacgacgcatggaacgtgcagctcttccgctccatcgacggcggcgcgtgcgacggcttcccgagcagcccggaggcggcggcgcgcctcgacctcgtgagcgggaagaacaacgtgatcgagcggagcatccaggacgcgtacatccacgccatccgccgcgccagggacttcatctacatcgagaaccagtacttcatcgggagctcctacgggtggaggcccggcggcggcgtcaggccggaggacgtcgaggcggtgaacctgatcccgagggagctctccctcaagatcgtgagcaagatcgccgccggcgagcggttcgccgtctacgtcgtggtgccgatgtggcccgagggccaccctggcaacgaggccatgcaggccatcctcgactggcagaggaggacgatggagatgatgtactacgacatcgccgtcgcgctcaaggccaatcacagcgacgccgacccgagggattacctcaccttcttctgcttggggaacagggaggccaagagccatggcgagtacgtgcctgcacatcgcccggatcaagacacagactacgccaaggcgcagaacgcgcgccgcttcatgatctatgtccactccaagatgatgataggtaacaacaactactagttgcaaatttcaaccactacggttaaactcgctctaaatttcacaccgaattcaatgtttttcttttatcagttgatgatgagtacatcatcgtcgggtcggccaacatcaaccagcggtcgatggacggcgggcgggactcggagatcgccatgggagcgttccagccacaccacctgaacgtcaatgggcaggctgcgagaggccagatccatggcttccggatgtcgctgtggtacgagcacctggggatgctgcacgacgacttcgtgcacccggggagcctggagtgtgtccggagagtgaacgcgatggccgacaggcactggcagctgtacgccggcgaggagctccacggcgacctccccggacacctgctcacctacccggtcgccgtcgagaaggacggcggcgccgtgacggcgctcccgggcgccgagttcttcccggacacggaggcgaaggtgatcgggacattggcgtcgtcggcgtacatgatcccctacctcacgtcgtagagtgttgctctgagtgtgtgatcgagttgccattcctgcacactgctagagtgttgctctgctttgggtttgggcagagtttgttgtttcaagcaatgtaatctatctccggttgaattctacagctctatgtagtgttctgttctaatatgaattatgttcatcggcttatttc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0604300, RefSeq:Os06g0604300