Os06g0614300

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Revision as of 09:26, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0614300| Description = Cyclase-associated protein domain containing protein| Version = NM_001064612.1 GI:115468955 GeneID:4341531| Length =...")
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Gene Name

Os06g0614300

Description

Cyclase-associated protein domain containing protein

Version

NM_001064612.1 GI:115468955 GeneID:4341531

Length

7689 bp

Definition

Oryza sativa Japonica Group Os06g0614300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:25451399..25459087

Sequence Coding Region

25451433..25451939,25453232..25453372,25454290..25454694,25454870..25454974,25455290..25455430
,25455985..25456188,25456861..25456947,25457344..25457455,25458627..25458670

Expression

GEO Profiles:Os06g0614300

Genome Context

<gbrowseImage1> name=NC_008399:25451399..25459087 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:25451399..25459087 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgacgagcccctcgacgccgcggcggcggcggcggaggcggagacccccgccaccgccgccgctgccgctgccgcctccccggcgctcctcctccggccgcggcgggtggcgttcgagcacgggctcctcccgatccccaagctggtgttcccggagggcacgctgacgcagaccctggcccagacgaaggagcgcctcatcgccgcggctgggggagacggagacgcctccgcggccccgcgggtgggcgccgcggcgctcgcggaggcgctgcagatcccgcgggagctggcggcgctggtgctcgggacgctcgccgcggtgctccccgcggaggaggaggcggaggacgccgacctccgcgacgtgctcctcttcctctacatccagtcctacaagcgcctcgtcccgcgcgcgcacaaggattcgcccgcggtcaccgacgtgtggccctccacctccgccttcgatggctacctctccgcgctctccccgatccagcttgtacgcagtaacagtcgccggtttatgccttcacaagcagatgaagaagctcatcaattatcttatctgcaaaagcatatggtcaacattctgagtcttttggcagattctgttgatggagagggcgatgagtctatggtattgacagcagagacatttgagcatctcggatttttatttcagttttctgaagggactcctttaagccaagtggctacattttttgcaaattctgatccagacatgcctgctgcacctgttcccgctgctcaggttcatgattggattctgcagaatatagctgcttcattagaaaatacagcagaaaaattgacagcaaaggaaaacagccaacagagtgcatctgatcctgatgtgacaatggctgaggctgtcacaaattcaagaattcatagcagttcaccaactggaactgctgttccaaacaatcaaggacactaccgaaatacaactttcctggagggtttctccaaaacttctgtagtgaaacaagcatcagatatcaaagggcattcaataaaggttttgaactgccatgactctgttatctacatattagctcctgttaaatatgccactgtctatgggtgttctgacactactatcgttcttggtgctgttggtaaggtggtaaaagtggagcattgtgaacgagtgcaaatcattgcagcttcaaagcgaatttgtatcgccaattgtcgtgaatgtatcttctacttgggagtaaatcaccaaccgcttattgtgggtgacaaccataaattacaagttgctccattcaatacttattatccacaattgggagaacatttggtgcaagttggtgtggattctaacatcaacaagtgggaccaaccttttgtgctgggagttgttgatccacatgattcattatctcatcctgcaggggtttctgatgtccaagctgaatctgctacttgtctagatcctgatctattcaccaactttttgattcccagttggtttgaggcacaaggacctacaaaatataatccatttacattgcctgaagtttattgggcatcccaaaggaaaaagcatgtttctctggaagatattcaaaagaatatccgagaattggagcttgatgatactcggaaaaaagaattggcatctgcccttcatgcccaattcaaggactggctatacgcttcaggaaatatccgccagctctactgtttgcaaggggaataa</cdnaseq>

Protein Sequence

<aaseq>MADEPLDAAAAAAEAETPATAAAAAAASPALLLRPRRVAFEHGL LPIPKLVFPEGTLTQTLAQTKERLIAAAGGDGDASAAPRVGAAALAEALQIPRELAAL VLGTLAAVLPAEEEAEDADLRDVLLFLYIQSYKRLVPRAHKDSPAVTDVWPSTSAFDG YLSALSPIQLVRSNSRRFMPSQADEEAHQLSYLQKHMVNILSLLADSVDGEGDESMVL TAETFEHLGFLFQFSEGTPLSQVATFFANSDPDMPAAPVPAAQVHDWILQNIAASLEN TAEKLTAKENSQQSASDPDVTMAEAVTNSRIHSSSPTGTAVPNNQGHYRNTTFLEGFS KTSVVKQASDIKGHSIKVLNCHDSVIYILAPVKYATVYGCSDTTIVLGAVGKVVKVEH CERVQIIAASKRICIANCRECIFYLGVNHQPLIVGDNHKLQVAPFNTYYPQLGEHLVQ VGVDSNINKWDQPFVLGVVDPHDSLSHPAGVSDVQAESATCLDPDLFTNFLIPSWFEA QGPTKYNPFTLPEVYWASQRKKHVSLEDIQKNIRELELDDTRKKELASALHAQFKDWL YASGNIRQLYCLQGE</aaseq>

Gene Sequence

<dnaseqindica>35..541#1834..1974#2892..3296#3472..3576#3892..4032#4587..4790#5463..5549#5946..6057#7229..7272#ctctctctctctctctctctctctctatccagccatggccgacgagcccctcgacgccgcggcggcggcggcggaggcggagacccccgccaccgccgccgctgccgctgccgcctccccggcgctcctcctccggccgcggcgggtggcgttcgagcacgggctcctcccgatccccaagctggtgttcccggagggcacgctgacgcagaccctggcccagacgaaggagcgcctcatcgccgcggctgggggagacggagacgcctccgcggccccgcgggtgggcgccgcggcgctcgcggaggcgctgcagatcccgcgggagctggcggcgctggtgctcgggacgctcgccgcggtgctccccgcggaggaggaggcggaggacgccgacctccgcgacgtgctcctcttcctctacatccagtcctacaagcgcctcgtcccgcgcgcgcacaaggattcgcccgcggtcaccgacgtgtggccctccacctccgccttcgatggctacctctccgcgctctccccgatccaggttaggtctcgatcaatcccctccccctccccctcttccgccgccgccctggtgggcacttgttctgttagctttgtgtgcacagtggtttgcggcagccgattatgatcacttgcgttggatttgggagcgaccgagtgacccgtttcaatgtaatttcaaatggatttatcgtacagagatgggcaatgtttctgccaactgaggaatgcaattgtgggatcactactataagttagaaataacatgatatgtccatagctgaatgattcctatttaaggactggccccaaaaaaaaactttagtctgaaatgctgtttgattcctaaaagatatttgcttttgtacgaatacattgtaagaactgacaaaagcttcaactttacaatgctactggcacttcacaagaacatgagaaacctttgataatggttctcttcgcttgtcagtgttatttttctttatccatatccattggaatatttgatgttgtgcaatggtaaactggtaatatttatgatagtactggacaccagtctgtggctactcggggtcacagagagtggggcattcaaaacaattcaattaatcatcaggttgcctggtagctacattgctcgctcaagctgattcataattttgtaagcttttctctgtagctggattgtaatattatacctcaaaatatgctcttccaatatatgatgactacaactattcagtattcacatagactgcaaatatgtgttggttaagtgttgtaatagttgtgataaaaatacttcagcacaaaatgtgctgctattgccacaatttatttgcagacgtcactgttataaggtctaaatttaaaatgtgagaagcttgacccttggtccacctatttccttttctaatttatcctgatatctactctatattcatcctcatccctgcttttagaaattccatctcaccttctgttcatattcccctttgaaatgctgtttacttgtattattgtatcattctatcatgtcgtgtaggagtcctatggtaggactagagatgcctcggctaggccgaagggctcttttagtcactctttttcatgactctgtgagttatgcaagcatgggactgttgaatgttgactgttccagtttgctccttttcatgattgccacaatagcgctttgccatcacttgcgacttgctttactcctgctagtgcagagaccaacagtttctatatttgttacttgtaagggcctttttaatattaatcttcattgtttatgttaatatgcagcttgtacgcagtaacagtcgccggtttatgccttcacaagcagatgaagaagctcatcaattatcttatctgcaaaagcatatggtcaacattctgagtcttttggcagattctgttgatggagagggcgatgagtctatggttagtatagctattgtataaatgtttgtctgtccttttctgatgtagttgtttgtggaaaaaaacatataattgtttcctgttcagtgcccatgagtccataactacgattaaatttgtcctcttgattccaaatataagtccttttaaacctgtgcacaagaatttagaaaataaggccgagtttagttccaaactatttcttcaaacttccaacttttccatcacatcaaaactttcctacacacacaaacttccaacttttccgtcacatcgttccaatttcaaccaaacttccaattttagcgtgaactaaacacaccctaactgacttgactttgttgccacattgaaaagatgagttatctatttgtgagaggagtagcatttgtttggcaagagcaaacatggaagggaagatgaaaaaggtgctggaagactggaagttataaacagcatacatttaggaaagatcaaatggacctgcatttggaatcacattttggaataggagggggtataactcaaagctttatcaagcaaataaaggactggaaagggccctccactgtgtgataaaaagaaataatgaatagtcagataacatattcatatgatgatatgaacagttatgggtacggaagcttcatcgcctgttcaggaagcagctgacaaagtaaattctaggctaatttctgcaatgaaatgtactttttaattttttggatcaatagaatattgaagatcttgatgtataggtccatcgttgtgtactactttcaaactcccaataaatctgggcactttaagtcatgtaggattaattattccatttgaaaagtatattcaactttatggtatttttagtctcaagattccctggaccctaactgttatgcacattgctttttatgcaggtattgacagcagagacatttgagcatctcggatttttatttcagttttctgaagggactcctttaagccaagtggctacattttttgcaaattctgatccagacatgcctgctgcacctgttcccgctgctcaggttcatgattggattctgcagaatatagctgcttcattagaaaatacagcagaaaaattgacagcaaaggaaaacagccaacagagtgcatctgatcctgatgtgacaatggctgaggctgtcacaaattcaagaattcatagcagttcaccaactggaactgctgttccaaacaatcaaggacactaccgaaatacaactttcctggagggtttctccaaaacttctgtagtgaaacaagcatcagatatcaaagggcattcaataaaggtatgcatctattagtttttggtagtactataaacatctagagggcggaatagccttactttgttattgatatctctgtgtgttgtaattcaaaaaacagaaactacctactccagactcttatttgaaagtcgagattttgtcagcctactattgatgaaatttttttttgtaggttttgaactgccatgactctgttatctacatattagctcctgttaaatatgccactgtctatgggtgttctgacactactatcgttcttggtgctgttggtaaggtatgtatatcatacaacttttgttaacaatatttcagcttgaacatgaaaaagtatgagatcccttgaattttttttattgatgtttcgacaaccaacacactttgttagaattttgctctaccaaagggcaaaccattttatgccactgatgcctattgacatgtgggtggaccttgggtccatatagcatcacaatgacctattgtggaatgtgcttgcagatatacaacttaatgtgatgcacattctagaaaggcctatagacacttttctcttttctgtttgtagttctaacaattttcatgcgatcaggtggtaaaagtggagcattgtgaacgagtgcaaatcattgcagcttcaaagcgaatttgtatcgccaattgtcgtgaatgtatcttctacttgggagtaaatcaccaaccgcttattgtgggtgacaaccataaattacaagtgagtatatctttttctaatcaactatttatatcttatggacaaatgtacactgttgtatatacatatctggttgctataaaggataaatagctttatggacaatcaaaaaggaaaaaaaaaaggaagcatggagacatacaggatgttcaagtttcttaacagaaacctatgctgatatctgaatgttttcatatccttcataactaattgttaaccaataagaagccatcccatcaaattaaggcgactacatcatttgagatgctaaaagaaactagcgcatgtttaacctatgtcattttggttatttggcaatacttgctagttggcaaggaaccatttctagtgaaggaccacatatttagttttccctcaaaagtgttaaggaatcagacaaaccttcgagtttataatttgatttattgattttggttcattcacacagaaacaagtttgctttaaaaacatggaagttacacttaatttgattcaatgtaattctctttgtatttcaacaacatcaaataaatttttatttcttgctttgtcaggttgctccattcaatacttattatccacaattgggagaacatttggtgcaagttggtgtggattctaacatcaacaagtgggaccaaccttttgtgctgggagttgttgatccacatgattcattatctcatcctgcaggggtttctgatgtccaagctgaatctgctacttgtctagatcctgatctattcaccaactttttggtatgtaactatatgttacccttctccgattgtctttcccaatttcaaagacacgtggatttagtgaaaatcttagctgcttgtactgagcagatttcagcttttcatttgttggcatatgacaaccttttgtacacgttatgtgtccaatgtaatgttgacatgtgtgacgtagcaagcaatcaaatgactaatcggcctttggggcttactagttgtacatggtccgaggcctaacttgaatggagttcaaaagagatgtaaaagagttgaagactttggagtcactaaacccttcaaatcatctttttatgttatcatgctgcacctgcttacctagtttttggcctggtgtggttgaccagtagtattcatttcacgtttcattagtactttagtagattaagttgaattggatgtgcctgcctgaatacgtggatgtatctgcattaacattatcatgttttttttttcttttgccttctttgactcatccaaatcagttttggtaagaattgatgaagccattttgctacattttttggttgtaactagtaggaaatcaagaatatccctattgctcagcatttgatgcagttcaaaactttaatccccgaatcactattttttctctgtaacaaaaatgtgattggtgcctaattttctgtacagattcccagttggtttgaggcacaaggacctacaaaatataatccatttacattgcctgaagtttattgggcatcccaaaggaaaaaggtatgtatgcattacaatcaagctgcaacacaattttcatttctttctaacagtggtttagtcagaaagggcttatttagtgagatgcttgcttgctagttagggtggttatctgatgtaactgtggacaatagaggaattcgataaaaatatgcatccattgtttgcctattttattatcaatattcatagcaaaaagttgtggtggatgttccgtgaatatagtttgagcaggattgatcaagattatgaaatctaagaataatttactgcaagttgtgggtaaaagtactcaggagcacagatcatgtaaattatgctttctgataaaacactaacatgctcttgattatcatatttatttctgaagttcgattcctttctgtacaatttcagcatgtttctctggaagatattcaaaagaatatccgagaattggagcttgatgatactcggaaaaaagaattggcatctgcccttcatgcccaattcaaggactggctatacggtaatactcacctattgataaaatttgcttagagtctttcaaaaaaaaaaaaaaatcttagagaatatatactccctctgtcccataatataagggattatgtgatacaaccctgtccagattcgtagtactaggttgtgtcactccaaaatcgcttatattatgggacggagggagtattaaggtttacatagttgcatgcctattttttcaaacttgtgtgtgtcttattagtttagactcagaacattatcttttcatggtttggctgttttttcttaatccatggactcatggttatcctaaagtatttgatgctcatgttatcctaaagtaattggtggtacttgagcacatgaataatgtgatcagatattatgctgggccaattatgatcccaagttagacaaatgtgccatgtgcaacttcctgtgcagtagttaccaactggtgattgcttatggatatggggctgtaattgtttataatgtactcttctcatctacatcagctactattcaattgatgttaaggtgtgtttggatcccagccattgaatgccatagctacagtattttcgccacgctacagtgttttctgaggcggacgaaacgtccgccacactcctgtggcgagccacgccgtggcgtggcattccaagccgccaaccaagcagccccatttcttgaccaccttttaaataacaaatatggctatcactttcactgccaagtgtatagtccaacaatggtattggagttctggacccctgtaagtgtttgatttgtctaaatttgggcaggacttatagggatacctggaagtgcaatttttaattcttaccatggttagaagcttgaatcttgattgcttatcgtgattagaggcttgattatttaactaatctatcatatattaaaatgttggatacgattatttacgtatgttattggtagttgttcatccaactggatataagcataaaagtagtttattaagtgagttgtactggtcgctgaagtggtaaactcaatcagtgatttctgtgaaaaaaaaaatctttatcctatttcagtgttgacactcattcttgttcacgcaaaggatggcctgttctattttgcaatactctgtttgaacaactaataacaattctgtattccatttccagcttcaggaaatatccgccagctctactgtttgcaaggggaataaaagcatctggctttcttcaacattcattcgcatgtgcttatatgctccttgaagattatgtaccttcacccgattcccttcaactccgtccatccaaccgcattgtccaagctgactctccaactgagcctgatccacctgttcttcaagccattgttgttttctttttagggaagaatgtaaagaaaaagcgcgatgcctatttttgccaattaattttgatcattcggtatgtgatgattggtggatggactgcaccttgggtttttgttgttgtctttatttatatatcctcgataaaatttgcgaggatgaatagggattactccttttcttttgaaaataaacatttttttcgcttatctgatgaggccatatactgtatttgtactctttatatctgggagaagattgcag</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0614300, RefSeq:Os06g0614300