Os06g0620600

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Revision as of 09:27, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0620600| Description = Hrf1 family protein| Version = NM_001064625.1 GI:115468981 GeneID:4341544| Length = 3137 bp| Definition = Oryza sat...")
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Gene Name

Os06g0620600

Description

Hrf1 family protein

Version

NM_001064625.1 GI:115468981 GeneID:4341544

Length

3137 bp

Definition

Oryza sativa Japonica Group Os06g0620600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:25794136..25797272

Sequence Coding Region

25794604..25794985,25795321..25795472,25795556..25795654,25795782..25795952

Expression

GEO Profiles:Os06g0620600

Genome Context

<gbrowseImage1> name=NC_008399:25794136..25797272 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:25794136..25797272 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagcgatgaacaatgatctgggaggactgggaggcagacctgctacttcacaagctaatccttttgaaagtgctttatatggagctggacctggactcatccgaagtgggttaggagcatacggcgagaagtttttaggttcaagctctgagtttatgcaaagcaatatcactcagtatctgtccaatcctcagtactactttcaagtcaacagtcagtatgtgagaaacaagttgaaggtgatcttgttccctttcctgcaccgggggcactggacaaggataactgaaccggtgggaggaaggttgtcatacaaacctccaattcaagatatcaatgctccagatctttacattcctctgatggcttttgggacgtatgttgtaattgctggatatgctttgggtgttcttgggaggtttaccccagaggcactcactctacagttcacaaaaggattacttggctggtttctgcaagtaatcctgatcagagttctactgtacacgctgggaagtggtgaagcgccattgctggacattgtggcctatgctgggtatggatttgctggtacatcacttgcaatgcttgtccgcgtcttctggagcccgtcatattattttgtactgccatggttctcaatctgcaccggagttttccttgtcaagacgatgaagagggttcttctgggcgcaccaaggagctatgagagacaccccagccggaatcactactttcttcttttcctcgcggttgtgcaatttcccatgctcttctggctaggcaacatcagcgggtga</cdnaseq>

Protein Sequence

<aaseq>MAAMNNDLGGLGGRPATSQANPFESALYGAGPGLIRSGLGAYGE KFLGSSSEFMQSNITQYLSNPQYYFQVNSQYVRNKLKVILFPFLHRGHWTRITEPVGG RLSYKPPIQDINAPDLYIPLMAFGTYVVIAGYALGVLGRFTPEALTLQFTKGLLGWFL QVILIRVLLYTLGSGEAPLLDIVAYAGYGFAGTSLAMLVRVFWSPSYYFVLPWFSICT GVFLVKTMKRVLLGAPRSYERHPSRNHYFLLFLAVVQFPMLFWLGNISG</aaseq>

Gene Sequence

<dnaseqindica>2288..2669#1801..1952#1619..1717#1321..1491#ctgcgacgcgctgcctccctctactgctgccgccgacgaatcccagcggcgccgcgacgccgccggtgcgccgccgcaggtgagggtttcttctcttcgtccacctagtttgccctccccgtaggtattggtcccaaatgcggggatcatcccctagtgcgcgtgagggccgagcgagcagtaaactgccgcgacggcgtgagggtttcgtggccgatgcgagctttgctgcgtgtgcgcaaggtcgcggtcttctcgagggaggccggccaagatcgccggtgccatccgagattcgggggaggggaggggggggggggaggggatgcggtcccagatctggtcggtgagcgagttccagatgttttggtcggaatcttgggccgtgaggaaagcgcaggaaggtctcagaatggttggggatgcagtgattgatcttacagctcaaatggaaggatcatttggagagggagcgaattgcaacgggaatagttcttcctgcttttgtttttttggatttttcccattacattcccaaccccaagaggcaagcattattgtgctatttttgaatcctaatccaagaaagtctagtgcattagtagctactgtcctgaatgacattcattcagaaggtacatctcaccactccagttgtctattgaaaatgttaaatgttagacgtgttactattttgagtacaattctaggctacctgttgatcatcatgtgtctaagcctttttttttaatcaactgtgtccagtggtatcaataatcgtgttctcagtgttacattgaaggaggtatttcacttgccgtttatccgtacctagggctagatgccatattttggttgaagatttggtcagcgtgataaaaattttgctttggtggtagtgcagaaacatttttgacctgctgttgtttcaattgacactggatttgccattatttcagtagactatggatatgcaaatccacgttggttctccaaaagcatttgctagttttgttttattttatggcaatggcacttggtgaaggttatggtactatgctaatttccccttattcaagtatatgtttatgatacatcttctcctcagcatatcatgctcagttggtagcttgaatatgtctatctaatggataggacattagtaattggttcctcagcatgttattttccgtttgtttctgagagccaccgtaggggatatttgttaaggttgtagacataagacgtttgagctgacctgaacattgatacattattttttgagtctttttttagttcgtttttgtttatgcagttagcatggcagcgatgaacaatgatctgggaggactgggaggcagacctgctacttcacaagctaatccttttgaaagtgctttatatggagctggacctggactcatccgaagtgggttaggagcatacggcgagaagtttttaggttcaagctctgagtttatgcaaagcaatgtaagtcattggtaaaatttcatcaaggcaaatgtatgctttctatattttgtgtaccacgttgtcatcaacacacgtgttttccccggagacattgaatcttaactttgcttcatcacatggacagatcactcagtatctgtccaatcctcagtactactttcaagtcaacagtcagtatgtgagaaacaagttgaaggtgatcttgttccctttcctgcaccgggtaagatttatccacctttttgtaggtattatatgcttattgtgaaatttcttacaagccatttaccaatttacttccttcaggggcactggacaaggataactgaaccggtgggaggaaggttgtcatacaaacctccaattcaagatatcaatgctccagatctttacattcctctgatggcttttgggacgtatgttgtaattgctggatatgctttgggtgttcttgggaggtaacgacatatttagtctcattcaactttgtagtgctgacttgcttcttctttagtagtaaagaaagaacgctatgcatagtgtgttgagtgacggtaagaacagtagttatgttgagaatttgagaagagaaggatgtgtggagaatggacaaatgctaaagcgtgggagtatctagaaattaacttctgtggtgcactgtttttcttgaatgatgaattcttgaaacatatttctagttcaaccaagtgcccaagtgttaaataatattcatttactcatgatattcttgattcagtgatgcatgcatgaaacacatttttgctgattgcaggtttaccccagaggcactcactctacagttcacaaaaggattacttggctggtttctgcaagtaatcctgatcagagttctactgtacacgctgggaagtggtgaagcgccattgctggacattgtggcctatgctgggtatggatttgctggtacatcacttgcaatgcttgtccgcgtcttctggagcccgtcatattattttgtactgccatggttctcaatctgcaccggagttttccttgtcaagacgatgaagagggttcttctgggcgcaccaaggagctatgagagacaccccagccggaatcactactttcttcttttcctcgcggttgtgcaatttcccatgctcttctggctaggcaacatcagcgggtgatatttcagccttattttagaactacataactcgatttattcggtattactggaataggtttgagatttaggcatatatgtcgttcatattcttgtggaagtggtaaattgctggacaagaagttgcataccaaatgtctgtccttcgcccttgtctgtccggcattaactgaagaccaatggatacacgaatgttcttatcgtacatcatcgctattttgccttctgtatctcatttttgttacttagtcaccgcgatcgccttcaagctgtcttacgacctgagacatgtctgtataaaatcagatgataatgttccttgtcgtgcacttcaattgcttctgaaatgtgattcttcagtggactggggatatgggagtacataggaccaagagagtgttgtgtaattccttacaaactccgtctgaaattttcctacttacaagtcaatacataatctataattagc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0620600, RefSeq:Os06g0620600