Os06g0634500

From RiceWiki
Revision as of 09:28, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0634500| Description = Similar to Leucine-rich repeat transmembrane protein kinase 1 (Fragment)| Version = NM_001187991.1 GI:297725112 GeneI...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os06g0634500

Description

Similar to Leucine-rich repeat transmembrane protein kinase 1 (Fragment)

Version

NM_001187991.1 GI:297725112 GeneID:9271669

Length

5707 bp

Definition

Oryza sativa Japonica Group Os06g0634500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:26604516..26610222

Sequence Coding Region

26608164..26608165,26608264..26608307,26608431..26608502,26608579..26608644,26608723..26608794
,26609573..26609705,26609813..26609891

Expression

GEO Profiles:Os06g0634500

Genome Context

<gbrowseImage1> name=NC_008399:26604516..26610222 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:26604516..26610222 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggccgccgctttggccggcgttctcctcctcgccctcgcggcggtggcgggagccgacaccgacggcggcgacgccgcggcgctggggaatctgtactcctcctggaatagcccggctcagctcaccggctggtcggccggcggcggcgacccttgcggtgccgcgtggatgggcgtctcctgcgttggctccgccgtcacctcgatcaagctttctggtatggggctgaatggcactcttggctaccaactatccaatctgctagcattgaagacaatggacttgagtagcaacaacttgcatgattcaattccttatcagctgccaccaaatctcgcctatctgaatttggcaggaaataacttttccggtaaccttccatactcgatatccaacatggtttcactcaactatctgaaattggtgaaatgtttggaaacctcactgcactttctgaactag</cdnaseq>

Protein Sequence

<aaseq>MAAAALAGVLLLALAAVAGADTDGGDAAALGNLYSSWNSPAQLT GWSAGGGDPCGAAWMGVSCVGSAVTSIKLSGMGLNGTLGYQLSNLLALKTMDLSSNNL HDSIPYQLPPNLAYLNLAGNNFSGNLPYSISNMVSLNYLKLVKCLETSLHFLN</aaseq>

Gene Sequence

<dnaseqindica>2058..2059#1916..1959#1721..1792#1579..1644#1429..1500#518..650#332..410#ctcactgcagctgtactgccacacccccacctcactgcggactagcagcagcagcaagagagagagagagagtgggagagtggggagaagctaagaagaaatcaagaatttcaatctttgccgacaccacactggatttccttcctcaagcaaccatggcagcagcagcagcagcatcagcatccatcgagagcatatattagctatccgtggtgatcatgtgatgccaagattgctactataagcaaggagatagcgagggagatattcttctctttctttttcaggtgggggagaaggtgaaggtaggaaggagggagagaggccaagaatggcggccgccgctttggccggcgttctcctcctcgccctcgcggcggtggcgggagccgacaccgacggcggcgacggtaatatcaattgcagcattcaccccaagttcttggtttcttggaatgcgtgcgtactgtttgatgatatgtctgcacggatgatcagttgcttttggttcttgcagccgcggcgctggggaatctgtactcctcctggaatagcccggctcagctcaccggctggtcggccggcggcggcgacccttgcggtgccgcgtggatgggcgtctcctgcgttggctccgccgtcacctcgatgtaaataaaagatcttctgattaaactccccccaaaatgtttttgagtgatgaaaagatttcgcgtttgatgcctttcatgttcgtggaaagcaggagtcattttgctggttttcttttcactgcatttcgtaaaaaaagattgccgtggctttgtcttgacgtgtgggcattgaaagccgctgatgaaatcctgaagtgtgttggtttttcacattctctatctttcagtaaatttctgatagataattggaaattctcatcctttgcagtagttgattgattctactatcatgagataaaacgttgtccaaaaaattttcattggatgcctatgatattaagagatagaaagtttttttttcctccctgcatgatgtcaagtggtgttaatataattctactctactctctgcatcgattaatttgccagctcagagtttgggagactggatccagccatccaggcaaataatggtgctctgctggttttcagtgtctttttcagttgtaggaaaaagggctttttcgtatgcataaaaaaatatttgatatttgttctcgttcaaaatctgatgtctgggtaacatgcaacaagcagaatatatctattctggctaaaatatagattatacaaaagaggctggagagtgtatcttatctttaagaccataccttaattttgctattttcctctctttttttttttttgtatatgaaatcgcctcaaatggagatgctcgatgctgaaccattctgtttgttcccttgttctgcagcaagctttctggtatggggctgaatggcactcttggctaccaactatccaatctgctagcattgaagacaatgtatgagctactacttgagcacaagtatttattgtcttgttttcccctaatttatgtccttcatttcttaacttacagggacttgagtagcaacaacttgcatgattcaattccttatcagctgccaccaaatctcgcctatctgtaatgcttcctggcttgcacaagtttattcaagtagtttttgatgcctgcatcttcaataacagttgcgatgcaggaatttggcaggaaataacttttccggtaaccttccatactcgatatccaacatggtttcactcaactatctgtaagtgctggccattgcaaatgtgcaattcattaggtggagattgttattttggttgacatagtctaactgtaaaaaaacacatctacatgcagcaatctcagccacaacttactatttcaggaaattggtgaaatgtttggaaacctcactgcactttctgaactgtaagtcctacaggacctttctttgcaaggcttgttatctcgattgttgaaactcttggtttcatgacatgatcttgtacaatttgaaatctttacagagatgtatctttcaataacctgaatggcaacttgcctatttctttacgctctctgtcaaatatttctggcatgtaagttcttactaatcctcagttcaaacttccaaatttcgtatttcatttcatggttctgatagttcttttgacccattgtgtagttatctgcaaaataaccaactatcgggcacagtcaatgtactcagcaacctaagccttactacactgtgagtgattttgtacaggctgacacgatttctatcctaatcttcctctcatgcttttcgcctaattatgtgagctattgtgcctttgaacagaaacatagcaaataacaatttcagcggttcaataccacaagaattcagttcaatttcacatttgatgtacgcaccaacaaccaacatgttttaatgttcttttctatgaaaaccatcaaattttgcatgctgatgggataatgcattttcaaaaatagacttggaggaaactcatttctcaatgtaccttcatctccgccatctactatcacttcaccacctcagggtcaaccagactttcctcaaggaccaacaactgctccaaatatccctgagattcctattgatcaaggtagtgacaagaagcaacgtctgcgaactggtctggttatagggatagttattggctcaatggctgctgcttgtggtgtacttttcgcgttggtactgtgccttcacaatgtccggaaaagtaaagatggtgggatcagtgaatcaaaagatgtcgcaagcacttttgcagtaaacatagatagaggtatgctcctatatatttgtgcacaatattttcattttatcatactattaatatttgttatttgtggctcagatttttttccccatataagaatagtaatagttcttgtggctggtgataatcgtgaaatttaggccactgtctgacatctgactaagaccagatggcatgagcaggcattacgaaaaaatatgtgagtgagatactaatatcattttttctccaaatctgataaaatataaatagaaaagaaacgaagacttgtttgagataaacattttattctgccagatatctcaaacatggtgtttgctttgttgatgactagctttttggcattcttcttcctttattgatgtgctctttgcacctgcattatagctattaggtgcttgggtatgcttgggagatgggaataataaactttgtaccttactttgtggctgtttctgcttattttattggcagtgctcctgccattttgagaaaaaggcaaagtgtaacattactttgtggtttgctgttaccaatatataataaaaaatgaaacttaaagaactgcagaaggccctgatgttcaattgttcattccccaaagttgaaaataaatcaatattacctacatctttggtgcttttcttttgcagcttctaacagggaaatatgggatcacacccagcaagacgcacctgtttcaagttccgtgctcccgcctatgggaaaaatgactcctgaaagggtatatagtacaaacagctctatgtcaaagaagatgaaggtctctgtcacagcgaatccatatacagttgcttctctccaagttgctacaaacagcttctgccaagattcgctcctaggtgagggttcacttggtcgtgtttacaaggccgacttccccaatggaaaggtaaaacatcacttgcagtaatctattgttggtcaatacagaaatattactttgaacttagcatggtattgccttatatatgttcaacaagtgtttatttgcatagctatgacgcagtggaactgaattctgtgcttgatcgcaggtacttgcagtgaagaagatagacagtgcgtcactttccttgtatgaagaagataactttcttgaggttgtgtcgagcatttcacgacttaggcacccaaacattgtgccgcttgcaggctattgtgttgaacatggacaaaggcttcttgtgtatgagcacattggaaatgggacactgcatgatatattgcattttttcgatgatacaagcaagatccttacatggaaccaccgcatgaggatagcactaggcaccgcgcgagctttagagtatgttattatttgagcactctagtgtttttcactctatgaaaaggttatgttaatcaagtataatgctacaatgcaatgccaacctttcttcagatacctgcatgaggtgtgcttgccccctgttgtacatagaaacttaaagtcagcgaatatcctgcttgataaagaatacagtccccatctgtctgactgtgggcttgctgccctgacaccaaatcctgagagagaggtaagtaatgtagtaccacatctctatcaatgtagttatttccaacatttcatctttaggtcctacagtagttctttgggctaaaccatgtgttatgatgcaggtttcaactgaagtgtttggatcttttggatatagcgccccagagtttgccatgtcaggaatatatactgtaaaaagtgacgtgtacagttttggagtagtgatgttagaactattgacagcacgtaaaccgttagacaggtacattaccttattatttcagagctagtaagtagtaagaaaatgagtaatgtatttctttattagtaacttcaaggccgtcattcattcttgtgttgcaatgtgcagctctagagagaggtccgaacagtctcttgtcacatgggctactccacagcttcatgacatcgatgcgcttgccaagatggttgatccagcaatggatgggatgtaccctgcaaaatcactctcccgtttcgctgacataattgcattgtgtgtccaggtaatattcgttatctttcgcacatttctttgtcctgcatatgactacccatttcttgttcgcccaaaattgttcttacagcttctaatatgaacaactcactgagcagacggttcagttctatcaatcttaaagttggttttggataacatatgaactagaaatactcttcagaagcacgctaagatcgatcatcattttcagtttgtaccataatgctgtcaatgctttgtagcccgaaccggagttccgtccaccgatgtccgaggttgtccagcaactggtgcgcctggtgcagagggcaagcatggtgaggcgtcaatcaggagaggatgtggggctttcatacaggggccctgaccgcgagggaggcacagccgacgccatctgagaccaaaatcttctcagtctctcagctatgcagggttacaaaagtttcagagaaagcaagctgggactgtggcaacatcccagtatctccaaagctatggatcagatcacttgttcctgcacaaaatgaaaagagaagagaagaaaagaaagaatgatctgatcacctgttgagtttggcatgagctgttcagtgttcagttttttcactctgttctctctgtggtatctgtccagattgtatactacagtatgtggattttgggccgctactgggactttgtgaatggcatgtatagtgttcaggtggctggtattttggtagttgttaattaatttatagtagataagaaaagaaggtagataaatgtacatttatggacttgtgcactgctactgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0634500, RefSeq:Os06g0634500