Os06g0644200

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Revision as of 09:28, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0644200| Description = Similar to Pyrophosphate-energized vacuolar membrane proton pump (EC 3.6.1.1) (Pyrophosphate-energized inorganic pyrop...")
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Gene Name

Os06g0644200

Description

Similar to Pyrophosphate-energized vacuolar membrane proton pump (EC 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H+-PPase) (Vacuolar H+-pyrophosphatase)

Version

NM_001064719.1 GI:115469169 GeneID:4341645

Length

5767 bp

Definition

Oryza sativa Japonica Group Os06g0644200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:27149901..27155667

Sequence Coding Region

27149955..27150252,27152119..27152693,27152856..27153235,27153322..27153408,27153506..27153836
,27154007..27154417,27154500..27154559,27154668..27154874

Expression

GEO Profiles:Os06g0644200

Genome Context

<gbrowseImage1> name=NC_008399:27149901..27155667 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:27149901..27155667 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaatcctagcgcgaggatctcgcaggtagcaatggcggcgatactgccggacctggcgacgcaggtgctggtcccggcggcggccgtggtcggcatcgcgttcgcggtggtgcagtgggtgctggtgtccaaggtgaagatgaccgcggagcggcgcggcggggaggggtcccccggcgcggccgccgggaaggacggcggcgccgccagcgagtacctcatcgaggaggaggaggggctcaacgagcacaacgtcgtcgagaagtgctccgagatccagcacgccatctccgaaggagcaacttctttcctcttcactgaatacaagtatgttggactattcatgggcattttcgcggtcctgatcttcctcttccttggatctgttgagggattcagcacaaagagtcaaccttgccactacagcaaggataggatgtgcaagcctgcccttgcaaatgctatcttcagtactgttgcctttgtgcttggtgcagtcacctctcttgtatctggtttccttggaatgaagattgcaacttatgcaaatgccaggacaacccttgaggcaaggaagggtgttgggaaggcattcattactgctttccgctctggtgctgtcatgggtttcctgcttgctgcaagtggccttgttgttctttacattgccatcaacttgttcggaatttattatggtgatgactgggaaggtctttttgaggctatcactgggtatggtcttggtggttcttctatggccctatttggccgtgtaggtggcggtatttacacgaaagctgctgatgttggtgctgacctagttgggaaagtagaaaggaatatccctgaagatgacccaagaaacccagctgtcattgcagataatgttggtgacaatgttggagatattgctggaatggggtcagatctctttggttcctatgctgagtcatcttgtgctgctcttgtcgttgcttcaatctcttcttttggaattaaccatgaattcactcctatgctgtacccgctcctgattagctcagttggtatcattgcttgtctgataaccacacttttcgccactgatttttttgagatcaaggctgttgatgaaattgagcctgccctcaagaagcaacttataatttccaccgttgtgatgacggttggcattgcacttgtcagttggttaggcctcccatattccttcacaatattcaactttggtgcccagaagactgtgtataactggcaacttttcttgtgtgtggcggttggtctttgggctggactaatcatcggatttgtgacagagtattacacaagcaacgcctacagccctgtccaagacgttgctgattcctgcagaaccggagctgctactaatgtcatctttggccttgctctgggatacaaatctgtcattattcctatttttgctattgcttttagtattttcctcagcttcagccttgccgcaatgtacggtgtagctgtggctgcccttggaatgcttagcacaattgcaactggtcttgccattgatgcctatggccctatcagtgacaatgctggaggaattgctgagatggctggcatgagtcacagaattcgtgagagaactgatgctctggatgctgcaggaaacaccactgctgccatcgggaagggtttcgccattggctcggcagccttggtgtctcttgccctctttggtgcctttgtgagccgtgccgccatctccactgtcgatgttctgacacctaaagttttcattggactgattgttggtgctatgctcccatactggttctctgctatgaccatgaagagtgttggcagcgcagcgctcaagatggtggaggaagtccgtaggcagttcaactccatccctgggctcatggagggcacaaccaagcctgactacgcaacctgtgtgaagatctccactgatgcatccatcaaggagatgattcccccaggtgctcttgtcatgctcagccctctcattgttgggatcttctttggtgtcgagaccctctcaggactacttgctggtgctctcgtttctggtgttcagattgccatctctgcatcaaacactggtggtgcctgggacaacgcaaagaagtacattgaggctggtgcatctgagcatgcaaggaccctgggcccgaaaggctcagactgccacaaggctgctgtgatcggcgacaccattggggatcctctcaaggacacctcaggcccctcgctcaacatcctcatcaagctgatggctgtcgagtcgctcgtgtttgccccgttcttcgccacccatggaggcatcctcttcaagtggttttag</cdnaseq>

Protein Sequence

<aaseq>MNPSARISQVAMAAILPDLATQVLVPAAAVVGIAFAVVQWVLVS KVKMTAERRGGEGSPGAAAGKDGGAASEYLIEEEEGLNEHNVVEKCSEIQHAISEGAT SFLFTEYKYVGLFMGIFAVLIFLFLGSVEGFSTKSQPCHYSKDRMCKPALANAIFSTV AFVLGAVTSLVSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAASGL VVLYIAINLFGIYYGDDWEGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVG KVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGIN HEFTPMLYPLLISSVGIIACLITTLFATDFFEIKAVDEIEPALKKQLIISTVVMTVGI ALVSWLGLPYSFTIFNFGAQKTVYNWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQ DVADSCRTGAATNVIFGLALGYKSVIIPIFAIAFSIFLSFSLAAMYGVAVAALGMLST IATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAAL VSLALFGAFVSRAAISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEV RRQFNSIPGLMEGTTKPDYATCVKISTDASIKEMIPPGALVMLSPLIVGIFFGVETLS GLLAGALVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDCHKAAVIGDT IGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGILFKWF</aaseq>

Gene Sequence

<dnaseqindica>55..352#2219..2793#2956..3335#3422..3508#3606..3936#4107..4517#4600..4659#4768..4974#tctcctctcctcctcctcttcgcgtcgaatcctcctccgagaagaggagagtacatgaatcctagcgcgaggatctcgcaggtagcaatggcggcgatactgccggacctggcgacgcaggtgctggtcccggcggcggccgtggtcggcatcgcgttcgcggtggtgcagtgggtgctggtgtccaaggtgaagatgaccgcggagcggcgcggcggggaggggtcccccggcgcggccgccgggaaggacggcggcgccgccagcgagtacctcatcgaggaggaggaggggctcaacgagcacaacgtcgtcgagaagtgctccgagatccagcacgccatctccgaaggtgagggagggggactgactcacccccgtgtgctgttcgtgtttttttttttggccttttttgggtggatctgagcacgcgcgtagttgtgtagatctcgtgccgtcgcagcggttactggcgctaatttttgctaatttagttgtttttttttggttgcttgtggcgtgaacatgttcaaaagtagcttatccgagcatcaattatggggaatttgcagcacaagattgatataattgtggggaatttgcagcacaggatttatatttttatattgctgtgaagagattataaagctcaggttaagatggcgctgcttttaatcaagcggagttgcgtgtctagcagtagtgcttgtgagcttgtgttactttatttattgtgtgaaatcatgagattcctctgagttctatcgaatttactgtggctaaagtagtattctattgtgtggaatcatgagattcctctctgagtttgattgaatttactgtgtgcctaaactataacgagagctgctacacatacgatttttcacgtacgatacttgtacgactaacgatttccagcgaaagcccgtaacgtttgtctcctgttttctagtgatgcacgcacggcgttcaccatcagttagaaatcatactagaatcgtacgcagaaatcgtatgcatagtattttcgaaactacaactatgctagtatgctagatgtgaactgttacattgttagttggatctacagaaacattaaacaatcatgttcccactttacacagcacatgttataataattcttagtcagtgcgtgctaatcgcgggtcaattaagttcgtttgttgcgtctgctgagatattttattggggagatatttttagtggggtagatcagaacttgaattgctcagttcttagaggccctcacgtaaagccctgcggtggccatgctgtggggataggagaatttactgatggaggaggacaagttattggaccagtggtcctacttattgctcttaggaggataagaagataacgatttttctgcgcacctgcattattgaagcagggagaaaatagtttcattttgactgtatccacctagcttggaaggaatcctagatgcggcgcacatggacgggacgatcttgtggtccattcattaatcataaaccttacatgtaaggttataattcaaggacagttgcaggctgagaggtggtgatttatgtagtttgtcctatgttaggcgcctgctttcttggcaggtttcatctctagcgatgcttgggtgagttttaatattgtgaaagtgttaggttctgtccttttctagtaaagttcaaacgtatttttggaaatatttgtttggtcaacatttctttcttagaagactatagggcttgcagttagtgtgccttacttgtggagtcctgctatgcatatgatctgtttcacaggaaatgctagatatgctaatagtttgcatggtttgtaatttgtgaatctggttttgtggaaactttctaggattggaactttgtttaatcaaatacatttttgttggtttcaattggttggatatttgagatattgggttactgaccagtgaccaaagtcccatctatttcactatttaatttagcctttgttaccatattttggtgctcatgtttatggagtccagtcaaacactacaattagaaaaacaggttcagttctaattataaacatatttatgcgttgctagctttggtgttttatgtttcagctattattattgttatcgctaaccttttcttgtcattgactaattgttgtatatttgtatgcgtctatgatctaaatactgttttttttaaactgtaaacaggagcaacttctttcctcttcactgaatacaagtatgttggactattcatgggcattttcgcggtcctgatcttcctcttccttggatctgttgagggattcagcacaaagagtcaaccttgccactacagcaaggataggatgtgcaagcctgcccttgcaaatgctatcttcagtactgttgcctttgtgcttggtgcagtcacctctcttgtatctggtttccttggaatgaagattgcaacttatgcaaatgccaggacaacccttgaggcaaggaagggtgttgggaaggcattcattactgctttccgctctggtgctgtcatgggtttcctgcttgctgcaagtggccttgttgttctttacattgccatcaacttgttcggaatttattatggtgatgactgggaaggtctttttgaggctatcactgggtatggtcttggtggttcttctatggccctatttggccgtgtaggtggcggtatttacacgaaagctgctgatgttggtgctgacctagttgggaaagtagaaaggaatatccctgaagatgacccaagaaacccagctgtaagaattctttcctgacgctttaaaaacttgtttcttaatattacttgaaataatttgttttgttcttttcataatgatttgtgttattgagcaaagcattaaaacatcgataggaatttatgtgcatgcaagaatgatcatttcttcctccttttgcaggtcattgcagataatgttggtgacaatgttggagatattgctggaatggggtcagatctctttggttcctatgctgagtcatcttgtgctgctcttgtcgttgcttcaatctcttcttttggaattaaccatgaattcactcctatgctgtacccgctcctgattagctcagttggtatcattgcttgtctgataaccacacttttcgccactgatttttttgagatcaaggctgttgatgaaattgagcctgccctcaagaagcaacttataatttccaccgttgtgatgacggttggcattgcacttgtcagttggttaggcctcccatattccttcacaatattcaactttggtgcccagaagactgtgtataactggtatgcccatatttaaattggaattccatcttttacttagaacttcattgttaaaatcattgacctcatttccctgattttgataggcaacttttcttgtgtgtggcggttggtctttgggctggactaatcatcggatttgtgacagagtattacacaagcaacgcctacaggtgcttataagtctgatcatattcaatgttgtctgtaatcttatatatttgcttctagtccctcatgtccctcacaccttgaatttcccttgtccagccctgtccaagacgttgctgattcctgcagaaccggagctgctactaatgtcatctttggccttgctctgggatacaaatctgtcattattcctatttttgctattgcttttagtattttcctcagcttcagccttgccgcaatgtacggtgtagctgtggctgcccttggaatgcttagcacaattgcaactggtcttgccattgatgcctatggccctatcagtgacaatgctggaggaattgctgagatggctggcatgagtcacagaattcgtgagagaactgatgctctggatgctgcaggaaacaccactgctgccatcgggaaggtaaaactgcttatcttgtcgaaagtgtttttatgttgtttttatgcttcatttccactctgaagtcaattaaaaatttaaaattgtgtttgcacttgtaaatatttttccttttgttacaaatgtcacaattttaaagttaattcccatctccatgattgtacttgtagggtttcgccattggctcggcagccttggtgtctcttgccctctttggtgcctttgtgagccgtgccgccatctccactgtcgatgttctgacacctaaagttttcattggactgattgttggtgctatgctcccatactggttctctgctatgaccatgaagagtgttggcagcgcagcgctcaagatggtggaggaagtccgtaggcagttcaactccatccctgggctcatggagggcacaaccaagcctgactacgcaacctgtgtgaagatctccactgatgcatccatcaaggagatgattcccccaggtgctcttgtcatgctcagccctctcattgttgggatcttctttggtgtcgagaccctctcaggactacttgctggtgctctcgtttctggtgttcaggttcgcacattctttttcacagccacactctcatcacttactcttgccatattgcattcataaccatgttgcttcctttcagattgccatctctgcatcaaacactggtggtgcctgggacaacgcaaagaagtacattgaggtaagaacttatcagccatcttccatcacagcaacacttgacgtcaagcagtttttttcccctcccatattcgccaaacattataactctcgttctccctggttttaggctggtgcatctgagcatgcaaggaccctgggcccgaaaggctcagactgccacaaggctgctgtgatcggcgacaccattggggatcctctcaaggacacctcaggcccctcgctcaacatcctcatcaagctgatggctgtcgagtcgctcgtgtttgccccgttcttcgccacccatggaggcatcctcttcaagtggttttagatggtgacgatagatttacgaggacgttatttttgccaggagggcgctggaaatcatccatatattatagagttcatcgagttgacacatatagttccctccgtttcctatttgttattactgtctgtccatcagtcgatcatgctaagcttattagcatcatacctgtgtctagtttttttgagtctggtagttgtagccgatgggagcaaatcactggccacctacaggtttggacaagagtaccttgaatttgcgttttcctgtaggttggatgatacgatgatggtgatgattattgtacgtgcacggaatgcacctgtctcagtgaaattttcccgggaaggttctgctgtttctttatgtccttgtgggaatgttaggatgatcttgtacaaaaaagaaaacaactctagtgatagggggtggagtacatgtgtgccaactaagtttgagttgtcttgaattattgaagtaaaatactttagctaaaatgacgtagtagtgcgtgtgcttgcttttgttttaagatagagaattatagtattattttgtatactatattttcctcctttcttgcttcgttcgtttcatattataagactttctagcagactcacattcatatatatggtaatgaatctaaatatatatgtgtgcctagatccattaataactatatgaatgtgggcaatgctagaaagttttataatatgaaacggaggtaataatatgaaatggaggcagtatcttatattttctttatcctaaataaataaatctaaatttctgg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0644200, RefSeq:Os06g0644200