Os06g0646000

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Gene Name

Os06g0646000

Description

SAM (and some other nucleotide) binding motif domain containing protein

Version

NM_001064731.1 GI:115469193 GeneID:4341657

Length

2956 bp

Definition

Oryza sativa Japonica Group Os06g0646000, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:27253117..27256072

Sequence Coding Region

27253354..27253491,27253575..27253688,27253854..27253965,27254341..27254534,27254730..27254952
,27255038..27255138,27255837..27255992

Expression

GEO Profiles:Os06g0646000

Genome Context

<gbrowseImage1> name=NC_008399:27253117..27256072 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:27253117..27256072 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagctcgcggtcagagcagccgccgcggcctcctgctcctccggcgcctcgctccagctcccgcgggcccgagccccgctccgcctccttggccaccgccgcctccccgctcgccgggtggctgtcgaggccgccgcgatcgccgtcgagccggaaaacaaagtaccgcagagtaacaattcagaagccgaggtgtttgcatgccctgtttgctatgagccattgataaggaaaggcccatcgggcataaacttgccatcaatttataggtctgggttcaaatgttcaaagtgcaacaagtcattcaccagcaaagatatcttcttggatctcactgtcacttctggaacaaaagaatatagtgaattgaagccagctagaactgagctgttcaggagcccactcgtctcatttctttatgaaagagggtggcgtcaaaatttcaatcgaagtggattccctggacttgacgaagagtttcaaatggctcaagattatttccaatcagttgctggtggtgtacttcttgatgtaagctgtggcagtggcttgttcacaagaaaatttgcaaaatctggatcgtactcagctgtgattgctttggacttctccgagaatatgctttgccagtgttatgaatttattcagcaagatgatactcttgtaaacacaaatcttgctcttgtaagggcagatatttcgagactcccttttgcttcatcttcaattgatgccattcatgctggagctgctatccactgctggccctccccttcgaatgcggtggctgaaataagtcgagtcctgaggcctggtggtgtctttgtagcaacaaccttcttatcttctcccaggaacaatcccttctctgttgaagcgttgcggccactgagacagattgttggaccagttaacaccagctacaattacttcaccgaaggagagctcgaagacttgtgcaaatcctgcggtcttgttaattacagcagcaaggtccagaggtcgttcatcatgttttctgggcagaagccgtag</cdnaseq>

Protein Sequence

<aaseq>MELAVRAAAAASCSSGASLQLPRARAPLRLLGHRRLPARRVAVE AAAIAVEPENKVPQSNNSEAEVFACPVCYEPLIRKGPSGINLPSIYRSGFKCSKCNKS FTSKDIFLDLTVTSGTKEYSELKPARTELFRSPLVSFLYERGWRQNFNRSGFPGLDEE FQMAQDYFQSVAGGVLLDVSCGSGLFTRKFAKSGSYSAVIALDFSENMLCQCYEFIQQ DDTLVNTNLALVRADISRLPFASSSIDAIHAGAAIHCWPSPSNAVAEISRVLRPGGVF VATTFLSSPRNNPFSVEALRPLRQIVGPVNTSYNYFTEGELEDLCKSCGLVNYSSKVQ RSFIMFSGQKP</aaseq>

Gene Sequence

<dnaseqindica>2582..2719#2385..2498#2108..2219#1539..1732#1121..1343#935..1035#81..236#acctaagcgtcgcctctcgtcttttttcccgtgcaacgttgcaagtgaaatcatcaatcgtgcgtgcgctgcgcccgaccatggagctcgcggtcagagcagccgccgcggcctcctgctcctccggcgcctcgctccagctcccgcgggcccgagccccgctccgcctccttggccaccgccgcctccccgctcgccgggtggctgtcgaggccgccgcgatcgccgtcgagccggtgagttttaagtcatttgatgttgccgcccctttgcctgacaggtgttcggcgttatgcggacctggcagcaggtcagctactaggtggtctggagctagtggaaatctcgcagcgattcttttttttttcttgcgcactgaggcgatttcttgcctctgctgtaaatggttagctgtttctatctcttctttgctataagtgcataggaggccatatatctgcaaagaagcttcgtagaatactgacaagatacattatctgtggatgatcagctgagaagttacatggacttatggacctataagttttttgagacttgagactagtgaccacttgggtaaattgggtttcgggtacatgctgatgatgactagcagtaacggggcacctacatataccatggtggttttgacttctgcttattcaaggtgcccacgtatgctggggcagagatgggcttgtcaataatcacattgcgtctgaatgtctgatgtttctcattagaccctgccctgctgtttgtgtgttatatcttggacttttggagttccaacctgacaataacgatagcctttttcgttctgtgtgaaactaaagaatttggctgtagcttctttgaagcaaaggctggaatgaattccattattaaaaaaaaaactgaagaattgattgtctctgtgttttacacttaataggaaaacaaagtaccgcagagtaacaattcagaagccgaggtgtttgcatgccctgtttgctatgagccattgataaggaaaggcccatcgggcataaacttgtacgtacaatttcatttctacattatgttttgcatgttttgttagattggcatttatgatatgttccttttatgcatgctccaggccatcaatttataggtctgggttcaaatgttcaaagtgcaacaagtcattcaccagcaaagatatcttcttggatctcactgtcacttctggaacaaaagaatatagtgaattgaagccagctagaactgagctgttcaggagcccactcgtctcatttctttatgaaagagggtggcgtcaaaatttcaatcgaagtggattccctggacttgacgaagaggttcatttctaggacattcccttcgttgtttgatatctcggcgttactaaataacaaagtctagccaacgtgacctgtggtgtaatatatttctgtttcaataagtaaagaagcaatgttaattcaccaagtgtttactatagaacataatcatttcttatgtatgtttttctgatctgttgttggtttcatcagtttcaaatggctcaagattatttccaatcagttgctggtggtgtacttcttgatgtaagctgtggcagtggcttgttcacaagaaaatttgcaaaatctggatcgtactcagctgtgattgctttggacttctccgagaatatgctttgccagtgttatgaatttattcagcaagatgatactcttgtaaacacgtgagctctcttcttcatgtctctgaatttcgttaatatcctttctgcttttcgtgtgagtacaaaaaattacagcatatgtcacacaaatgaaacaagacataaccttaaccacttctaacataaatatattatcaattaagcattttgcagagcatcactttgtctgtttgaagttactagtttatgtagtttaatttaatctatgcatcaattaccaggcaacacaaaaattacgtgattaacatccaaatgaactgcaattgacacagaattctattttctccatctggtgctttttaagacaaatactccaatctttatttagttcatgccaggtgcacaactaactgttttcctcttatgcttacacagaaatcttgctcttgtaagggcagatatttcgagactcccttttgcttcatcttcaattgatgccattcatgctggagctgctatccactgctggccctccccttcgaatgcggttagtatctgtccaatttgctctcatgattaaggtgactaatttggtctgtatagcagtattggagtctccagatttatgataatgaattgttctgtaaaactgtcatcactttaaactgctttcacctgaatctctgttcttctgctcctgtttaattatcaggtggctgaaataagtcgagtcctgaggcctggtggtgtctttgtagcaacaaccttcttatcttctcccaggaacaatcccttctctgttgaagcgttgcggccactgagacaggtaactttttctacttattttctgcttatctaaccctatgagcttatgcagtcatactcacattgctgctttatatactgcagattgttggaccagttaacaccagctacaattacttcaccgaaggagagctcgaagacttgtgcaaatcctgcggtcttgttaattacagcagcaaggtccagaggtcgttcatcatgttttctgggcagaagccgtagcctaaaattacatcaaaacctttgtagccaaagtatagctgtcaattctacaaaagtctttgtaaaatgccattcaccgatacctgcatagattagacccagcagaagtttttgcttggaattcctctccctgttatgaagatatagttgtcacatgtatactgtgcttcagtacagtgatgtaccacagccagggtgtatttcacacctggaagaaaaaaaaaacgttctagtact</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0646000, RefSeq:Os06g0646000

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os06g0646000&oldid=12372"