Os06g0649800

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Revision as of 09:29, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0649800| Description = DNA glycosylase family protein| Version = NM_001064754.2 GI:297606278 GeneID:4341682| Length = 2828 bp| Definition ...")
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Gene Name

Os06g0649800

Description

DNA glycosylase family protein

Version

NM_001064754.2 GI:297606278 GeneID:4341682

Length

2828 bp

Definition

Oryza sativa Japonica Group Os06g0649800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:27446282..27449109

Sequence Coding Region

27446282..27446292,27446659..27446845,27446900..27447034,27447128..27447269,27447349..27447432
,27447525..27447582,27448503..27449109

Expression

GEO Profiles:Os06g0649800

Genome Context

<gbrowseImage1> name=NC_008399:27446282..27449109 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:27446282..27449109 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcttccatggccggagcgccgagggtccggtcgctgaacgtggcggagacggacgcggacgcgaggccggtgctggtgccgggtggcaacaaggccaggtcgggccccgccgccgcccggaagccctcgccgaagccgctgcggaaggcggacacggcggcgaggacgccggagaaacccgccgccgccgccgccgccgccgctcctccggccaaggaggaggagggcgccaagaagaatgccggcggcggcgtgggcaagggctcgtcccccttgccgtcgccgaggcgggcgcagccgcagccgccgccggcgaggaaggcggcgcacgacgcgcccgtgcacctcaacctgtcgctcaacgcgtcctgctcctcggatgcctccgtggagtcgctccgcggccgggactcctccggtgggaggctggagaggagctggtccagggtggcgcccgccgtgccgaggcgggggaagactccagtgaaggcggcggcggcggcggcggcggcggagaaggttgccgccgatgcggaggttgtcgcaccggccacaccggaggcggggaagaggaggtgcgcgtgggtgactccgaccagtgatccttgctatgtcatcttccatgatgaggagtggggtgttccagttcatgatgacaggagattgtttgagctgcttgtactgtctggtgcattggccgagctcacatggcctgaaattcttaaaaggaggcaacttttcagggaaattttcgtggacttcgatcctgttgctatctctaaaataaatgagaagaagcttgtagcaccaggaagtgttgccaactcccttctgtcagagcaaaaactccgagcagttgttgaaaatgctcgacagatacttaagattgtagatgaatttggatccttcgatcgatactgttggggctttttgaaccacaagccaatagtgagcaaattccgatatccaaggcaagtccctgtcaagagccccaaggcagacatgatcagcaaagacatggcagcagggctgaccaatgatcaccttgtcagttgctttcggttcaaagaatgcaatgaagctccaactctttgcacgagtgatactagcaatgcaaattcagaggcagatctaagtgcagatgaactgagaacaaaaatctgcagcaaggagatggctgcaaaagcagagctgttgaggacgatcgggcacatttaa</cdnaseq>

Protein Sequence

<aaseq>MAASMAGAPRVRSLNVAETDADARPVLVPGGNKARSGPAAARKP SPKPLRKADTAARTPEKPAAAAAAAAPPAKEEEGAKKNAGGGVGKGSSPLPSPRRAQP QPPPARKAAHDAPVHLNLSLNASCSSDASVESLRGRDSSGGRLERSWSRVAPAVPRRG KTPVKAAAAAAAAEKVAADAEVVAPATPEAGKRRCAWVTPTSDPCYVIFHDEEWGVPV HDDRRLFELLVLSGALAELTWPEILKRRQLFREIFVDFDPVAISKINEKKLVAPGSVA NSLLSEQKLRAVVENARQILKIVDEFGSFDRYCWGFLNHKPIVSKFRYPRQVPVKSPK ADMISKDMAAGLTNDHLVSCFRFKECNEAPTLCTSDTSNANSEADLSADELRTKICSK EMAAKAELLRTIGHI</aaseq>

Gene Sequence

<dnaseqindica>2818..2828#2265..2451#2076..2210#1841..1982#1678..1761#1528..1585#1..607#atggcggcttccatggccggagcgccgagggtccggtcgctgaacgtggcggagacggacgcggacgcgaggccggtgctggtgccgggtggcaacaaggccaggtcgggccccgccgccgcccggaagccctcgccgaagccgctgcggaaggcggacacggcggcgaggacgccggagaaacccgccgccgccgccgccgccgccgctcctccggccaaggaggaggagggcgccaagaagaatgccggcggcggcgtgggcaagggctcgtcccccttgccgtcgccgaggcgggcgcagccgcagccgccgccggcgaggaaggcggcgcacgacgcgcccgtgcacctcaacctgtcgctcaacgcgtcctgctcctcggatgcctccgtggagtcgctccgcggccgggactcctccggtgggaggctggagaggagctggtccagggtggcgcccgccgtgccgaggcgggggaagactccagtgaaggcggcggcggcggcggcggcggcggagaaggttgccgccgatgcggaggttgtcgcaccggccacaccggaggcggggaagaggaggtgcgcgtgggtgactccgaccagtggtgagttcttgcttcttggcttcttgattgtatcattatttgattttaatttgagtagtagggaatataatttgtgcttagttcatactccatttatgtgttgcagcttctgttattttatcataatttagtatgattttccactcagcatacttattgagaattttgttgtaaatataggcaaaccctgctttaaaaatttaccagcagactaatgctggcttcttgacccaaataaaaatgacaaattgatcatctagttgttatgttgttaaactatgtttatccttttggaggtggctccatcattttgcctacattggataaagtgagcattgtctcctttgtcttgcctataaagcgagcacgttctccattgatgcccttttcattcttactaccttcaagggtttgttgattccgtgttaggtgttagcatctggttatcaccttgcattgttacttccacacaggcctaatatgtaattagctcactaggctctagtttgattcattgaatggacattctaatagaaaatgatgtgttttgctgtataaccatcacttgattagtcccaattcagagttttctgttgcacgtgcttggtagtcatcctgccatgaaaatctgccagaattatcttgcaatgaactgaaactatcagaaattgggtaatgaaaaggccactctacctataggtaaaatgataggctatatattaatgggtagcttcatctataccccaagaatactaaagcttcaggtaggatgcttgctttgtttgacattgtcacatgctatggtttcccagatctttttctttaccttactgatgaagtatttcttgctttctgcatcatttgtcatgaagaaagctggcttttcaatctcttactgtccattcattgtctctgatcagatccttgctatgtcatcttccatgatgaggagtggggtgttccagttcatgatgacaggtatgaaaaattgtgaattcatgtattctttcattcttgttattcaaagaaactgacagtctgagaatgtcgaatcatgaccgatttcacaggagattgtttgagctgcttgtactgtctggtgcattggccgagctcacatggcctgaaattcttaaaaggaggcaacttttcaggtatggattctctaatgttacatagtagaactgaagaaattatgtactttgttcctaacatctgtgccaaatcttccagggaaattttcgtggacttcgatcctgttgctatctctaaaataaatgagaagaagcttgtagcaccaggaagtgttgccaactcccttctgtcagagcaaaaactccgagcagttgttgaaaatgctcgacagatacttaaggttagaaggcatgcttgatcatacactcatacctagttacaatttcagttatgtatgtcttgattgaagtaacaaggttccctcaaaactcagattgtagatgaatttggatccttcgatcgatactgttggggctttttgaaccacaagccaatagtgagcaaattccgatatccaaggcaagtccctgtcaagagccccaaggcagacatgatcagcaaagacatggtccgaaggggtttccgaggcgtgggcccaacaatcatatattccttcatgcaggcagcagggctgaccaatgatcaccttgtcagttgctttcggttcaaagaatgcaatgaagctccaactctttgcacgagtgatactagcaatgcaaattcagaggcagatctaagtgcagatgaactgagaacaaaaatctgcagcaaggagatggctgcaaaagcagagctgttgaggacgatcggtacgcttatcatttcataggaccatgtggaacagtgatgcggttactgtacctgtattgcccatgtgtaggttgtgtgctaggttatcctcaaaatgagttttagggatcaaaatgcttttgtgtataaatcatttgtgtcagtaatgcaacccagtttgtacattgctaccggagagaaggatgatgaccattttactgatgcagaaactgtgaaaaatcttcctcaatcagttaacatttttttctccagatcattgctgtttttactcaagtttttcctgcatggacaaatttatctggtaggatgttatgatttggaattgtaatgagcactgctagattccctgtggctgcttgctacagggcacatttaa</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0649800, RefSeq:Os06g0649800