Os06g0651300

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Revision as of 09:29, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0651300| Description = Zinc finger, C2H2-type domain containing protein| Version = NM_001064763.1 GI:115469257 GeneID:4341692| Length = 353...")
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Gene Name

Os06g0651300

Description

Zinc finger, C2H2-type domain containing protein

Version

NM_001064763.1 GI:115469257 GeneID:4341692

Length

3536 bp

Definition

Oryza sativa Japonica Group Os06g0651300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:27538063..27541598

Sequence Coding Region

27538601..27539455,27540832..27541359

Expression

GEO Profiles:Os06g0651300

Genome Context

<gbrowseImage1> name=NC_008399:27538063..27541598 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:27538063..27541598 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgagctctcactcgtccctgacaggttctgccaccccccgcgcaggcgcagtggggcacttccgcggcgggctccggccgccgccgccgccgccgacgccgttcgggtgggaggaggccgcgcggctggagcggatcatcagcgaggaggtggggcggcggctcatcgagaaggaggtggagcggcggctcatcgaggaggacgtgcgccgcgaggtcgccttcgcccacggcctccacgtgctcccgcacgatcccttcccgcgaccgccgccgccgccgccggagatgccggtgggcatgcacccgcacccgcacgagccgccgccacgcttccaggagttgggggcatgggagggatttcgacctcgccggcagcacgccggagtcgctgctccgcttaggttcgggcagaggatgctccttggtggcgcggagaggaggtggtcgccgccgccgccgccgcggccgaagccgaagcacaagctcgtgctgcgggagatcgaacctggggaaagctccgaggttccttcagaaacaaaacattcagaagcaaaacctttggaaacaaaacctttacaaacaaaggtttcaggagtgaagaggaaagtagatgcaattcctgcaaccactcgaccagggaaattacagaaaccagcccaggactggagctgtgcactatgtcaagtgagtgcaactagtgagggagctctaaatgaacatcttgaagggaaaaggcataaggcaaagctggctcattgtggagccagcaatgcgattaaggatggcaaaagcagcctgaaagaaaaaactgcaaataaggatgatgcaggccctagtgatgcacctaagaaaatatgcatccaggtagatggagcaatgcatgaagttgttcaaaaaagcaattacctgtggtgcgatcgctgcaaagtcaggtgtgacaacaacgtgaccatggctgaccatctgcggggcaagaagcacagtggtttaaacaaggtttggacatcaataaatgctgtcagaatgaacaagaaaaaggaacagtcggctgctacatgggaagaaacggtgaatgaaaatgaacgtactgaaataccagtggaagctaaggatgacagcgcaggcttgtccaccgaagaagacgaaacatgccattatgaaattccagtgaaaaatagtaagaatgaaggcacatacttggccactgaagtagatcaaagtgactctgaaattgaaactccggtagaaattatgagagaaggcttgaacatggccaccgatgccaccgatgaaaatgtccgtatggaagatccactggaaatcaagaaggaaaaccccgatgagacaaatcttgcgccaaaggaggagcaacactaa</cdnaseq>

Protein Sequence

<aaseq>MSSSHSSLTGSATPRAGAVGHFRGGLRPPPPPPTPFGWEEAARL ERIISEEVGRRLIEKEVERRLIEEDVRREVAFAHGLHVLPHDPFPRPPPPPPEMPVGM HPHPHEPPPRFQELGAWEGFRPRRQHAGVAAPLRFGQRMLLGGAERRWSPPPPPRPKP KHKLVLREIEPGESSEVPSETKHSEAKPLETKPLQTKVSGVKRKVDAIPATTRPGKLQ KPAQDWSCALCQVSATSEGALNEHLEGKRHKAKLAHCGASNAIKDGKSSLKEKTANKD DAGPSDAPKKICIQVDGAMHEVVQKSNYLWCDRCKVRCDNNVTMADHLRGKKHSGLNK VWTSINAVRMNKKKEQSAATWEETVNENERTEIPVEAKDDSAGLSTEEDETCHYEIPV KNSKNEGTYLATEVDQSDSEIETPVEIMREGLNMATDATDENVRMEDPLEIKKENPDE TNLAPKEEQH</aaseq>

Gene Sequence

<dnaseqindica>2144..2998#240..767#agtctcttctcttcttccacctcgaagcgcggccgaggagaaagccaccgaacagtgctgcgcagtgcggcgcagcgccgccgcggcgagggccatggagttccggttccgcgccggcgatcgcaggcatcgacctccctccgccgcgtccgggcccttctccgacacccgccgcggctacttcgtcggggcggcgcaagccatgcgaggtaattaagcaggggctggatagagctgtgatgtcgagctctcactcgtccctgacaggttctgccaccccccgcgcaggcgcagtggggcacttccgcggcgggctccggccgccgccgccgccgccgacgccgttcgggtgggaggaggccgcgcggctggagcggatcatcagcgaggaggtggggcggcggctcatcgagaaggaggtggagcggcggctcatcgaggaggacgtgcgccgcgaggtcgccttcgcccacggcctccacgtgctcccgcacgatcccttcccgcgaccgccgccgccgccgccggagatgccggtgggcatgcacccgcacccgcacgagccgccgccacgcttccaggagttgggggcatgggagggatttcgacctcgccggcagcacgccggagtcgctgctccgcttaggttcgggcagaggatgctccttggtggcgcggagaggaggtggtcgccgccgccgccgccgcggccgaagccgaagcacaagctcgtgctgcgggagatcgaacctggggaaagctccgaggtttgcaccaactagtctttttactctgagtagcaacaaaatgacatccccttcgttctcctcaacttttatttccctatttggcataaagcactgatactgatacctggttctgaaattcctttaccacatttctcttctgtcacttggaagttctgattacagtatctctagatggtagctttcttccattttagcttgtgttgctatactcttgatgataaaagaacatgtgagtaaatccttgttatgtagagtggtcattgtttttgttgattcaggggaagtccaggagtagatctaagtactggctgcaatacatctcatataggtagaagggttttttattttcaccttgatagtcattttgcaataatgaagaactgtggggggacacttatctcaaggtttaggtaaaagttttaattagattataagatttcaagagattgttgcccttttggaccagaagaaatttctgaagtgaaatttattgtttagccatgagtgaacttggtgcacagagatgtcatttggccctttggaacacatgaacattctgaggtaaaatttatgatttaggaagatgggctaaacttgatagaagagatataatccacatttgttgggaaagaagtgctgagcaggctgtagtaacctgttaccactttttttttggcgaagatcgctggcccaatttatcaagaagaagggtaggaaacggtagaacagcaccatcaaggtgccttgaatacaggattttactcaacacacacataccacttaccaccagggttaatcctatcggttaggccgatttgattgggcctcaccgaaatgccgaaatttcggaaatttcgatccgaaatttctgaaattttgaacaaaatttagttaaatttgaacaaatattaccaaaatgcatgaaacaattgaaaaaattcagccgaagtaatatcgtataggaggggaccgaaatttctgaaattttttggaaatttcggtccgaaatttccaaccctgcttaccactgttttttggttgttggaagtgctggcatagtttactgggggtatgaggtacatcatacagggttcagaagggggactagggaattacttgtggatttcagtttctacttgtagcaatataaaaacctacggttagttctttatcaaattgtttggtccctcttgccctttgttgtttgacatcagtgttctctatccaatatccacacattcatctggtagatatccctatagaaatattttcaatcaagcaaatgaccatgacatgcttttgttctagagcgttattttgaagcagtcagatgcatattaagtttttagctgagctgaaatatcctttttcaggttccttcagaaacaaaacattcagaagcaaaacctttggaaacaaaacctttacaaacaaaggtttcaggagtgaagaggaaagtagatgcaattcctgcaaccactcgaccagggaaattacagaaaccagcccaggactggagctgtgcactatgtcaagtgagtgcaactagtgagggagctctaaatgaacatcttgaagggaaaaggcataaggcaaagctggctcattgtggagccagcaatgcgattaaggatggcaaaagcagcctgaaagaaaaaactgcaaataaggatgatgcaggccctagtgatgcacctaagaaaatatgcatccaggtagatggagcaatgcatgaagttgttcaaaaaagcaattacctgtggtgcgatcgctgcaaagtcaggtgtgacaacaacgtgaccatggctgaccatctgcggggcaagaagcacagtggtttaaacaaggtttggacatcaataaatgctgtcagaatgaacaagaaaaaggaacagtcggctgctacatgggaagaaacggtgaatgaaaatgaacgtactgaaataccagtggaagctaaggatgacagcgcaggcttgtccaccgaagaagacgaaacatgccattatgaaattccagtgaaaaatagtaagaatgaaggcacatacttggccactgaagtagatcaaagtgactctgaaattgaaactccggtagaaattatgagagaaggcttgaacatggccaccgatgccaccgatgaaaatgtccgtatggaagatccactggaaatcaagaaggaaaaccccgatgagacaaatcttgcgccaaaggaggagcaacactaacaccatagattggtgttttgcttgacttcttcattaattaagacaagcttatgccaaacatatgcccgttctctcttcaacatatggagctcacagggtaacaacactacttagggataaatttttcttgtaaagttgtttggctactggtaatcaagttaggaaccatgcaagttgtttatgagttgtgccctctgtgcctagcgccatagatgacttgcaagatttctaacttgagtgccagtgtccaagtaattttgcatggaacatttctccctaatttgtgtagcttgttattctgtaaggtgcatatgttaccagaatggataatttgcatgatctcagagagaaactgatgtgggcatgcgaagtattttcagcgagttcaatatcttagccgcctctatgctactgctagttgcattagttttgattgatgcttggcagtgaccaagctgagctgagtcctgtctatatagaggtgacgagttgcttagctccctgtaactgtacttcagttattagtttcttcgtaacc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0651300, RefSeq:Os06g0651300