Os06g0651600

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Revision as of 09:29, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0651600| Description = Similar to Protein phosphatase type-2C| Version = NM_001064764.1 GI:115469259 GeneID:4341693| Length = 4414 bp| Def...")
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Gene Name

Os06g0651600

Description

Similar to Protein phosphatase type-2C

Version

NM_001064764.1 GI:115469259 GeneID:4341693

Length

4414 bp

Definition

Oryza sativa Japonica Group Os06g0651600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:27542182..27546595

Sequence Coding Region

27542479..27542503,27542596..27542798,27542887..27542941,27543085..27543137,27543242..27543318
,27543389..27543512,27543602..27543727,27544118..27544271,27544364..27544472
,27544566..27544629,27545437..27545553

Expression

GEO Profiles:Os06g0651600

Genome Context

<gbrowseImage1> name=NC_008399:27542182..27546595 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:27542182..27546595 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggagtttaccttagtacccccaaaaccgagaagctatctgaagatggcgaaaatgataagcttaaatttggactctcatctatgcaaggatggcgtgcaactatggaggatgctcattcagctttgctagatatcgataatgacacatcattctttggtgttttcgatggacatggaggaagagtggttgctaaattctgtgcaaaatatctgcacagagaagttctcagaagtgaggcctattcagcaggtgacctgggcaatgcagcccataaagctttctttagaatggatgagatgatgcgaggtcaaagaggctggcgagaactacaagcacttggagataagataaaccagattagtggcatgatagaaggcttgatctggtctccaagaggcagtgattcaaatgatcaacacgatgattgggcttttgaagaggggccacactctgactttgctgggccaacctgtgggagcacagcttgtgttgcaatagtaagaaatagccaacttgttgtcgcaaatgctggtgattcccgctgtgttatctcaaggaatggtcaggcatacaatttatcaagagaccacaaaccagagcttgaagcagagagagaaagaatactaaaagcaggagggtacatacagatgggacgagtaaatggaactataaacttgtcaagggcaattggtgacattgaatttaaacagaacaagttcttgtctcctgataagcaaatgttaactgcaaaccctgacatcaacacagtggagctttgtgatgatgatgactttcttgttttagcatgtgatggcatctgggactgcatgtctagccaacagctggttgatttcatccacgaacacataaacacagagagcagcctttctgcggtatgcgaaagagtgctagatagatgcctggctccatcaactttgggtggagaaggatgcgacaacatgacaatgatcctagtgcagttcaagaagccaattagtcagaacaagaatgtcagtcctgcggaacaatcagctgccgacaaacaaccaactggagacacacattggtctgagattcatgtgaccgaggagagtagctcgtga</cdnaseq>

Protein Sequence

<aaseq>MGVYLSTPKTEKLSEDGENDKLKFGLSSMQGWRATMEDAHSALL DIDNDTSFFGVFDGHGGRVVAKFCAKYLHREVLRSEAYSAGDLGNAAHKAFFRMDEMM RGQRGWRELQALGDKINQISGMIEGLIWSPRGSDSNDQHDDWAFEEGPHSDFAGPTCG STACVAIVRNSQLVVANAGDSRCVISRNGQAYNLSRDHKPELEAERERILKAGGYIQM GRVNGTINLSRAIGDIEFKQNKFLSPDKQMLTANPDINTVELCDDDDFLVLACDGIWD CMSSQQLVDFIHEHINTESSLSAVCERVLDRCLAPSTLGGEGCDNMTMILVQFKKPIS QNKNVSPAEQSAADKQPTGDTHWSEIHVTEESSS</aaseq>

Gene Sequence

<dnaseqindica>4093..4117#3798..4000#3655..3709#3459..3511#3278..3354#3084..3207#2869..2994#2325..2478#2124..2232#1967..2030#1043..1159#ctccttctcccctcactcgtagtctcgtcttcgtctactccaccaccaccatctcctctccctctcgtcttccctggcgcgcgcggccggcgagccggcgagcggcgtcgcggcggtgaacttcctcgtcctcgtccccttcccgactccccgccccccacctagcctcctcccaagtgaggactcctcgcgctcgcgcgcgcgcggccggcgaggggcgacgcagccggggcctccgtcctctcggcagcacgaattgaattggaggtaggtaggtatgtattccgttcttcgctcgtagcgccttcttcgcaccactcgatttcgcctgcgtagagtggagatccgtccggaatttgattggtttcacccccaattagcaccccccgtgtgccccccacgtgaggtggatatactgtactagttgactgctactaggatggacttgctttgaattttcgttgtaaaaatgtaaaatatacatgtataatccgtttactttctatgatggtttatcttcatatcttggctacgctacaaaatgatacatcaaatatggtattgaactagttttgttgtcggcagaatcgattgtactagttataggcggactttgaaacacacatagtatatattggcatggtcgcaaacaaaccaaaccttttcttcgctgatttttgctgcaccctgatatgctttatttgttgttgcatatacactggtgcttttgcaaagtttgggtctagtgctatttctgctgaaaatgctctttaatctttggatgtgtagcagcgtaaaactctggtttttcttgtatgcaggggctttcaagttattgtttaagcatttttttgttgtaatttctgacatataaacttgtcggtatgctagaaagaactttggaactaactttagattgcccgtacaatcatatgcaaagtagatgaatgccgcttcattcaagtgtattctagagggttgttagtgcgcactaggcttcttttcctactgacatattctgttgtcaggcacatttgtaaaaatgggagtttaccttagtacccccaaaaccgagaagctatctgaagatggcgaaaatgataagcttaaatttggactctcatctatgcaaggatggcgtgcaactatggaggatgctgtgagtttctatccattattccttaatgttgcttaccactttcgtatttccagattccattattcgatggatacctccagaatgttaggaaaatgtaaactccagtgtctgtacaatggatagagtttcttttccaatagcaaagttgtcattgaggttagttgaagtccatatacataacaaaatagttgaaatgatatttgattagcggttcagaggtgatgactgatgagataagtaacatttatatgtttgttgaattttggtcctaaagtagtgatatcttttcatacatttggtggacttattttaaatcagcaaaatcatgaatcaactgatgatttccagttaccattttagctgaaaaaagatctggtgttgaggtaaccatgagtccatgacaaatacatgtgcacgtgcacgcacacacaaaaggacctcacacttttcctgattttaccacggcagtttattctccagatgttggatgtaggcatcttagaacttgtttggcatatactccatactgaactattgcctatactggatgttcaaactagctagtagctactgaaaatataatctagatatatccataataagtcttgatcactaccattaaagcagaagctatggctaatatttggtgacttatttagttctttagcatagactaataaaatattgccacctggcatgtccagttgacatctttttataagctaaaatttcctctgttttaattcagctgtgattgtgttggctcattttataatgcaaactctaattctgcatgcaatgttccagcattcagctttgctagatatcgataatgacacatcattctttggtgttttcgatggacatggaggtatggttacctgtagagaacagttgctcttctttactcatgactttttgaacattggactaaaacaaacatcaacctaataccttgtctcaggaagagtggttgctaaattctgtgcaaaatatctgcacagagaagttctcagaagtgaggcctattcagcaggtgacctgggcaatgcagcccataaagctttctttaggtataggaagcttgaatgccttttccctcataaccaattggcaattttctgtacaattgtttataacagaaataatgaccgcatcatttcagaatggatgagatgatgcgaggtcaaagaggctggcgagaactacaagcacttggagataagataaaccagattagtggcatgatagaaggcttgatctggtctccaagaggcagtgattcaaatgatcaacacgatgattgggcttttgaagaggtacttgtgcacttggcatgaattgactgatcaaacataacataacatgcaatctacattgcaagatggtgccttaagcatttgtataacttaacgctcatgtgttatgactagacatatggtatccaccttcactaagtgtttaaagttgcaaaagggcagttatatatacagatcagagaacaactttaagttgttaagattcacacatggggcttatgataccaacaatgagaactcttgacaagcatatgaatattttttgtcctcgtttgctattgtcatgttgtgcggtgcctgtagcaatgctatcatattggtgtttcttcatattttcacagtttgacattaggtgcttcatgtagtcttacaacacttttttaataccaggggccacactctgactttgctgggccaacctgtgggagcacagcttgtgttgcaatagtaagaaatagccaacttgttgtcgcaaatgctggtgattcccgctgtgttatctcaaggaatggtcaggtctgtcattgttgttcctcagagacttgtactacacttatatgtaaagatgcaacaaggatctcattattgctctatctgtaatataggcatacaatttatcaagagaccacaaaccagagcttgaagcagagagagaaagaatactaaaagcaggagggtacatacagatgggacgagtaaatggaactataaacttgtcaagggcaattggtatgttctgtacttgctgttctgttcatactgattacatgatgccttacacatgcaaagatttctgtaggtgacattgaatttaaacagaacaagttcttgtctcctgataagcaaatgttaactgcaaaccctgacatcaacacagtaagcacttcaacttctaacattgttttaaattgtcccagctactataccatgttatcgtttccttcctgatggtattttatgaaacttatttggttttgtaggtggagctttgtgatgatgatgactttcttgttttagcatgtgatggcatctggtaagcccctctatcaacgggttccataattgctatcagtgtaatagcctattatgctactttgcacaagctattagctgcagttttacagtttctttggccagaactcagaagtaaccaccatatactctgaccacaaacagggactgcatgtctagccaacagctggttgatttcatccacgaacacataaacacagtgagtaacagtttatttctgtaatgttaaagcttatatgggatttcttggtctttggcaatacttgaggcatggaaacaaaatgcaggagagcagcctttctgcggtatgcgaaagagtgctagatagatgcctggctccatcaactttgggtggagaaggatgcgacaacatgacaatgatcctagtgcagttcaagaagccaattagtcagaacaagaatgtcagtcctgcggaacaatcagctgccgacaaacaaccaactggagacacacattggtctgagattcagtgagttaccttcttcaatgcagctgacgatctctttcattcataatcgatttttctacccacacatactaaccctaaactcttgtgatcagtgtgaccgaggagagtagctcgtgatgttctagcccgataaaaccggtacaccaaagaacacccagtgtatcctgatgcgatatcgcaattggctaaacaggcataattcacgaaatttcggtgtacataccagcctcgttaaattgttgacacagcgtttacacccgtggccattcatgttctgctgcattagcagccaatcagtttgttattctccaaagctccagtttgtaatttccggttgtgatttcatctcaccaatcctcttctaactactgtacaagtgtacattttggtggaaatgagttacctgttgagtgt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0651600, RefSeq:Os06g0651600