Os06g0652400

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Revision as of 09:29, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0652400| Description = Similar to GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase (GER1)| Version = NM_001064770.1 GI:115469271 Gene...")
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Gene Name

Os06g0652400

Description

Similar to GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase (GER1)

Version

NM_001064770.1 GI:115469271 GeneID:4341699

Length

1780 bp

Definition

Oryza sativa Japonica Group Os06g0652400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:27585110..27586889

Sequence Coding Region

27585185..27585206,27585288..27586252

Expression

GEO Profiles:Os06g0652400

Genome Context

<gbrowseImage1> name=NC_008399:27585110..27586889 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:27585110..27586889 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcaccgtcaccaccgccgatccgcacgcctccttcctcgccgacaagggcggcaaggtgttcgtcgccggccaccgcggcctcgtcggctccgccatcctccgccacctcgtctccctcggcttcaccaacgtggtcgtccgcacccacgccgagctcgacctcacccgccagtccgacgtcgaggccttcttcgccgccgagctcccccgctacgtcgtcctcgccgccgccaaggtcggcggcatccacgccaactccaccttcccggccgacttcatcgccgccaacctccagatccagaccaacgtcgtcgacgccgcgctcaaatgcggctccgtccgcaagctcctcttcctcggctcctcctgcatctaccccaagttcgcgccgcagccgatcccggagaactccctcctctccggccccctcgagcccaccaacgagtggtacgccgtcgccaagatcgccggaatcaagatgtgccaggcttaccgcatccagcacggcttcgacgccatctcggccatgcccaccaacctctacggcccgcaggacaacttccacccggagaattcacacgtcctgcccgcactgatccgccggttccatgaggcgaaggcgtccaatgccgcggaggttgtcgtctggggcactggctcgccgctgcgtgaattcttgcacgtcgatgaccttgcagatgcggtgatcttcttgatggatcactactcggggctggagcatgtcaatgtaggaagcgggagcgaggtgacgatcaaggagctcgcggagctggtgaaggaggtggttgggttccaggggaagctggtatgggactctagcaaacccgatggcacaccgaggaagctcatggatagttccaagatacaggagatggggtggaagcccaaggtccccctcaaggaggggctcgtcgagacatacaagtggtatgtcgagaatgtcatctctgcgaagaagtag</cdnaseq>

Protein Sequence

<aaseq>MGTVTTADPHASFLADKGGKVFVAGHRGLVGSAILRHLVSLGFT NVVVRTHAELDLTRQSDVEAFFAAELPRYVVLAAAKVGGIHANSTFPADFIAANLQIQ TNVVDAALKCGSVRKLLFLGSSCIYPKFAPQPIPENSLLSGPLEPTNEWYAVAKIAGI KMCQAYRIQHGFDAISAMPTNLYGPQDNFHPENSHVLPALIRRFHEAKASNAAEVVVW GTGSPLREFLHVDDLADAVIFLMDHYSGLEHVNVGSGSEVTIKELAELVKEVVGFQGK LVWDSSKPDGTPRKLMDSSKIQEMGWKPKVPLKEGLVETYKWYVENVISAKK</aaseq>

Gene Sequence

<dnaseqindica>76..97#179..1143#ctaatagcccccaaatccccgtacgcgaatcgcatctcctcgtctccggcggccgcggcgatcaactccggcgacatgggcaccgtcaccaccgccggtaagccccccgacgccgcacgcgtcctctcctccttatcctcttctctccactcccttcctctcaccccgttccctgcagatccgcacgcctccttcctcgccgacaagggcggcaaggtgttcgtcgccggccaccgcggcctcgtcggctccgccatcctccgccacctcgtctccctcggcttcaccaacgtggtcgtccgcacccacgccgagctcgacctcacccgccagtccgacgtcgaggccttcttcgccgccgagctcccccgctacgtcgtcctcgccgccgccaaggtcggcggcatccacgccaactccaccttcccggccgacttcatcgccgccaacctccagatccagaccaacgtcgtcgacgccgcgctcaaatgcggctccgtccgcaagctcctcttcctcggctcctcctgcatctaccccaagttcgcgccgcagccgatcccggagaactccctcctctccggccccctcgagcccaccaacgagtggtacgccgtcgccaagatcgccggaatcaagatgtgccaggcttaccgcatccagcacggcttcgacgccatctcggccatgcccaccaacctctacggcccgcaggacaacttccacccggagaattcacacgtcctgcccgcactgatccgccggttccatgaggcgaaggcgtccaatgccgcggaggttgtcgtctggggcactggctcgccgctgcgtgaattcttgcacgtcgatgaccttgcagatgcggtgatcttcttgatggatcactactcggggctggagcatgtcaatgtaggaagcgggagcgaggtgacgatcaaggagctcgcggagctggtgaaggaggtggttgggttccaggggaagctggtatgggactctagcaaacccgatggcacaccgaggaagctcatggatagttccaagatacaggagatggggtggaagcccaaggtccccctcaaggaggggctcgtcgagacatacaagtggtatgtcgagaatgtcatctctgcgaagaagtagcgccgtgatgatgatggcatgttgttctcaatatcttctggcgccttttaagttggtattacagtcaatagttttcatgttgttgctggctactagatcatacaattatcagttataagctctcccacaaagaagaggtcgttatgttggttgaataatgtggggtcaaactagtatacaattagaatcttaattgatctagaacaatttctgtcgattagagaaagtttcacactttgcaatgtttgatgtcaattggcctgaaaaagttttacacacacggaataagtaagctatgttttgatttatgaaataattttatctgttcagaacagtttctatgctttgtgcccttgttttgtatgctaattatggttgggaggtgagaggagatattaatggaataaattaatttcttatgtttttgttgatggctcagttgttgaaaatcaaagtgtagttcgtttgtaatgaagtcatattattgttttggggctgtacatttgtgttaagatagtcaggtagtctattagttagtcttacagtaagtttttcttctacaagcttgtgccagatttaacacttccatgtatacccaccttactcaaaataatatttaccatctgtgattagaact</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0652400, RefSeq:Os06g0652400