Os06g0652600

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Revision as of 09:29, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0652600| Description = Similar to Lustrin A| Version = NM_001064771.1 GI:115469273 GeneID:4341701| Length = 2344 bp| Definition = Oryza sa...")
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Gene Name

Os06g0652600

Description

Similar to Lustrin A

Version

NM_001064771.1 GI:115469273 GeneID:4341701

Length

2344 bp

Definition

Oryza sativa Japonica Group Os06g0652600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:27591871..27594214

Sequence Coding Region

27591921..27592806,27592899..27593048,27593416..27593936

Expression

GEO Profiles:Os06g0652600

Genome Context

<gbrowseImage1> name=NC_008399:27591871..27594214 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:27591871..27594214 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcatctcacagagctgctgtttttgctgttcttacgctgctactttcagtagctgcaattgcaatggctaggccaatcagaagaagcgatttgggcttgggccttggcgctaatggtgggctaggtgtaggactaggacttgatatcggactaggtggttccggctcggcatctagttcaggccagggctcgggttatggggcctggtctgggccaaacggtggttcttacactgcgtcaggtcatgggttgggcttgggctccggatatgggtatggatcaggatccgcgtatggagctggtaatgggggctctgcttcgggttgtggctctggctcaacatcttgctcgggctcaggatcaggttccgtaggactagggacatcgattaacgttggtgtgggtgtaggagccaatggtggcactaacggcgggtcagattgcgacactggctctgggtcaaactatggctctagcacaggctcaagctctggctacgggtcgggtggagtttcctaccgctcacgtggtcatggcgggtcttctagtattgggtcaggttcgggggttggtttaggagcaacttctggtgttggtgccggttctaatgttgggccaagtggtggttgctcgacttgtggttctggttctaggtcgggatcaggtgcgggtgggggttcatattctggatcaaatagcggctcgtcatcgagttctggctctggttcaaactcaaattcaattggagggtcaggatcaagttcgggtgctggctctggctcaagtgcaagctcaggttatggtggctctagttctggttctatgtcaggatctggttcaagttcatcatccggttccacagggatgtcatatggttcatcaggtgctggctcattcagtggatcaagcagcggttcaaactctaatgccggctccatgtcaggtgcaaactcaggagccggttcaagctctagtgcatatggtgcatcaggcagtggatcaaactccatgtcggattcagggtcaagctcaggatcggttagtgcttccggaagtgggtcgtccaactctggtgcaggttcaggttccagctcttcttcatggtccggttctaattctggctctggcacaatgtcgggaattgacgctccgtcaagtacaggaacatcgtctactgctgaatcaaactctggatccgccacctctgtcaccggtgcaaactcaggctcatattcaagcgcatggtccaactccaactccaactccggctcgactatgccatctggtataggggttgcttctaatgctggctctagctcaggttcttggtctaatgctggctcaaacactggcacactctctggggctggatcctctaactggtcaagctcgacgtccgggtctacctcaagctcaggtttaggtggtgggcaaggggttggaagcagattcggttccggagcccaaccgacttttggtatgggtggaggaggtgggtttggagcgggttacggatttggagccggagccggaggttggggtaagcaccattaa</cdnaseq>

Protein Sequence

<aaseq>MASHRAAVFAVLTLLLSVAAIAMARPIRRSDLGLGLGANGGLGV GLGLDIGLGGSGSASSSGQGSGYGAWSGPNGGSYTASGHGLGLGSGYGYGSGSAYGAG NGGSASGCGSGSTSCSGSGSGSVGLGTSINVGVGVGANGGTNGGSDCDTGSGSNYGSS TGSSSGYGSGGVSYRSRGHGGSSSIGSGSGVGLGATSGVGAGSNVGPSGGCSTCGSGS RSGSGAGGGSYSGSNSGSSSSSGSGSNSNSIGGSGSSSGAGSGSSASSGYGGSSSGSM SGSGSSSSSGSTGMSYGSSGAGSFSGSSSGSNSNAGSMSGANSGAGSSSSAYGASGSG SNSMSDSGSSSGSVSASGSGSSNSGAGSGSSSSSWSGSNSGSGTMSGIDAPSSTGTSS TAESNSGSATSVTGANSGSYSSAWSNSNSNSGSTMPSGIGVASNAGSSSGSWSNAGSN TGTLSGAGSSNWSSSTSGSTSSSGLGGGQGVGSRFGSGAQPTFGMGGGGGFGAGYGFG AGAGGWGKHH</aaseq>

Gene Sequence

<dnaseqindica>51..936#1029..1178#1546..2066#acatcaaatcaggaagatcatagcacagttgcacacagtcttgatcagcaatggcatctcacagagctgctgtttttgctgttcttacgctgctactttcagtagctgcaattgcaatggctaggccaatcagaagaagcgatttgggcttgggccttggcgctaatggtgggctaggtgtaggactaggacttgatatcggactaggtggttccggctcggcatctagttcaggccagggctcgggttatggggcctggtctgggccaaacggtggttcttacactgcgtcaggtcatgggttgggcttgggctccggatatgggtatggatcaggatccgcgtatggagctggtaatgggggctctgcttcgggttgtggctctggctcaacatcttgctcgggctcaggatcaggttccgtaggactagggacatcgattaacgttggtgtgggtgtaggagccaatggtggcactaacggcgggtcagattgcgacactggctctgggtcaaactatggctctagcacaggctcaagctctggctacgggtcgggtggagtttcctaccgctcacgtggtcatggcgggtcttctagtattgggtcaggttcgggggttggtttaggagcaacttctggtgttggtgccggttctaatgttgggccaagtggtggttgctcgacttgtggttctggttctaggtcgggatcaggtgcgggtgggggttcatattctggatcaaatagcggctcgtcatcgagttctggctctggttcaaactcaaattcaattggagggtcaggatcaagttcgggtgctggctctggctcaagtgcaagctcaggttatggtggctctagttctggttctatgtcaggatctggttcaagttcatcatccggttccacagggatgtcatatggttcatcaggtcaatatttattcttgtacaatcatgttgcagcaaggtagaatttgcatgcctttcttgcacttagactaattaaaatgttctcattttaggtgctggctcattcagtggatcaagcagcggttcaaactctaatgccggctccatgtcaggtgcaaactcaggagccggttcaagctctagtgcatatggtgcatcaggcagtggatcaaactccatgtcggattcagggtcaagctcaggttcatccaaactatccaatatatggttatacatttaggcacagtttctttttcttttgtaaggtttatagattatcacggacatgtttcccaagcttttaaatgctgcatttttttaaaaaaaactatatataagttttttagaattaattttgaaacaacttttaaatttctaatttcattcgtttgtaccctcatatattatcataaaaccagttaatataatccattatccattcatccatccagctcaaaagaactgagcgtgacaaatatatgtatcgctaacagccgctaagttgtgtctctaaatacaaaacaatcatacttaatatgcactgaatggtagctatttatcttgctgcaggatcggttagtgcttccggaagtgggtcgtccaactctggtgcaggttcaggttccagctcttcttcatggtccggttctaattctggctctggcacaatgtcgggaattgacgctccgtcaagtacaggaacatcgtctactgctgaatcaaactctggatccgccacctctgtcaccggtgcaaactcaggctcatattcaagcgcatggtccaactccaactccaactccggctcgactatgccatctggtataggggttgcttctaatgctggctctagctcaggttcttggtctaatgctggctcaaacactggcacactctctggggctggatcctctaactggtcaagctcgacgtccgggtctacctcaagctcaggtttaggtggtgggcaaggggttggaagcagattcggttccggagcccaaccgacttttggtatgggtggaggaggtgggtttggagcgggttacggatttggagccggagccggaggttggggtaagcaccattaagataaggtgttgggcagattcttatataaaaaagaagggggtgagaattttggatccccttgctctcatggttgatttacatgttgtattgagttccctgggaataagcgatcatcagttttcagtacgctcagttcctcttgtacactagcagtagctgctctttgtttccaacaaaatgcttgaatcgttgtggtcatcgtgacgcatcagtacgtacttcttcatatgtaccggcagatgctatcttggaatgaaatcatgaaatctttgtgacc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0652600, RefSeq:Os06g0652600