Os06g0659200

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Revision as of 09:29, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0659200| Description = Intron maturase, type II family protein| Version = NM_001064797.1 GI:115469325 GeneID:4341730| Length = 4959 bp| De...")
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Gene Name

Os06g0659200

Description

Intron maturase, type II family protein

Version

NM_001064797.1 GI:115469325 GeneID:4341730

Length

4959 bp

Definition

Oryza sativa Japonica Group Os06g0659200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:28000572..28005530

Sequence Coding Region

28004955..28005458

Expression

GEO Profiles:Os06g0659200

Genome Context

<gbrowseImage1> name=NC_008399:28000572..28005530 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:28000572..28005530 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtcaaaactgttgttagttaccacttgaggttctcctgcttcttgacattggctgagaagcatgaatgcaccaagaggcaagcaattagccattactcaaaggatttgaaggtgacaaatgacgatggagtggctgaagtgcacttcccaacagagcgcgagatcaggatgatgggtgataagaatctatctgatccaaagcctgtggatggagccttgacaatgatctttgtcagattagctgttgatgacaccacctatccatgtgtggcacatttttgtgctgaaacagacactgtgatttatcgaatacgtttactccagaatcgtctaaatgtagatcctctgaatgagaagaagtgggtccaagggctaagtgccattcacgagagtttaaacaagaaatgcctccctttgtgccccatgcatgcaagtgatcttcttcttggcaagattactcttcaagatattgactgtactcgatttgttgatgtggagtaa</cdnaseq>

Protein Sequence

<aaseq>MVKTVVSYHLRFSCFLTLAEKHECTKRQAISHYSKDLKVTNDDG VAEVHFPTEREIRMMGDKNLSDPKPVDGALTMIFVRLAVDDTTYPCVAHFCAETDTVI YRIRLLQNRLNVDPLNEKKWVQGLSAIHESLNKKCLPLCPMHASDLLLGKITLQDIDC TRFVDVE</aaseq>

Gene Sequence

<dnaseqindica>73..576#gatattatcaattggtatgcaggtgttgggaggaggtggcttgattttttctgctgttgtcggaatttcaagatggtcaaaactgttgttagttaccacttgaggttctcctgcttcttgacattggctgagaagcatgaatgcaccaagaggcaagcaattagccattactcaaaggatttgaaggtgacaaatgacgatggagtggctgaagtgcacttcccaacagagcgcgagatcaggatgatgggtgataagaatctatctgatccaaagcctgtggatggagccttgacaatgatctttgtcagattagctgttgatgacaccacctatccatgtgtggcacatttttgtgctgaaacagacactgtgatttatcgaatacgtttactccagaatcgtctaaatgtagatcctctgaatgagaagaagtgggtccaagggctaagtgccattcacgagagtttaaacaagaaatgcctccctttgtgccccatgcatgcaagtgatcttcttcttggcaagattactcttcaagatattgactgtactcgatttgttgatgtggagtaaaacacacttgcataatacctcttgggaacacatgtatcatgcatttatttgtggttcttgccaagtgcatctagtgttgattgcccttggtggagtgcgtcatggttagatccattacagtcctgtcatgtagtagaagaaatgctggctttcttttccagaggtatgtgtttcatggaagctttgaaaggctgcttagcatcatcacgtggataactaaatattatcttatcttctgcccaggaatgttgctacttactagtgttagcgtaaattgtatgcggaacaacttcatatcaatgctgctcaggtatttctttcagtcaacacccctggaccatatcacgcactatattttttatacatcatatacatatatatatatatatataccttgtaaaagtgaacaaaatctagttagcttacatttccaatcatataacagcttattagtcatgttacctctcttgcggccatcaatacatcgcgttgcccagttgcgcacttgcgctcatatcattgaaatttgttatcagttttaactctgaattgccatgaataagtacctgtcatattagcgtgaataagtgcatatattatgttcttactttggaaaacctgttttattgactacgttcacaggcacatacagatacttgctgttgattactcttcaataatgttgaaattattggtgcaggttctgttttcttttcctctcgactgattatgattgtgaaatgttatttgtagacttgtagtacagaaattttagccattatcatgttatgaaatctggatcaccactgaaccacaaaaacttattaacaaatatgaacaattttccaagtcttagctacataatgcatgttctttgttgaccttacatgctgagatggatcaaattagtgcatgtgattgtcctgcaacctatgcatacgataaatattaactaactctcactccttgtgcagttggttgattctgttattgatttggcaagaaatctcgtgataccaaccgaactgattgttatggtcaggatgtatcatcatgatgaggtgctgtcatccatggtcaaagtggtttcctgcttctatctcacatggccatgtagggatatcagcatgctaaacaggaagctgttcatgattgttgtcatggtcttcttgacatgatagttttccagacactccatgatctcacagtagctaccgaagctgccgcagcatgcatctaacaaccatcttcaggtacgtcacatcagcccattgtgcaaacgtgctgcgtcctgcatgagacgcctaattgactgtttatctgctttagatgttatatcaccgattattaacaggatacatgggccctagtagcagagccagacgttgatgttgcatttgcagttggacatatcacaagatcatatccatcgttttgagaacagggtgataatctctgccggcaacgatgattttacatgattgctgatctacgcaggctggcattggcttccatgaaatggacgacaaggcaacaggtccatgccgacggtggaacatatttggtggtgtccggagcacagcggccgtcgacacctcgtatgcacaggacctcgatcaaagcctcaaaggcaggcagattgcgactgcacggtcaggattacattatgcaatagtatatcacagtgagtagaaattaaaaactaaaggaagcaatgttacgcatcaaaattaatttattctttgttgggagattcttgtcgcttgcatacattggtgaagtttttctgggccgtgtcacagacacccagtattccctctgttactgatgaagggaagtcaaatgtttgcagcaaacaaaaacaacacacacagttgcatcttcttaagttatctctgcacaatcattgagttctaaatccacaggctttgtttcagaacatatcatcccaaccaatgaatctcatcctcgtctagttgccatgttcttgtcagagttgttatctaccatttccattattccattgtttcctaaacttcgcaccttgcagttttaaacacgaattttctgaatggctaagcttcagtctctttagtaattttattttccaggggcgcgacgtttcacgtcatcattgggaggaggcaccgggcgagtacagcatccggatttcgaactgatttagtggtgggcgcacgtgaacttcagcgcatgccccacgctcgctgcgctacaccccattctccccaatgaccaagaaatataaacagatcatgccatattgcaagccaaccataaaatattcgaggtaagtgtaaatagcagaattcttctctcatcttctaaattaaccctttattttgaacgtgacatttttcttatacctatacgaactaaggccttctttagttactaaagcaaaaattttcatgctatcacatcgaatattaggacacatgcatggaatattaaatgtaggaaaaaaacaattacacagattacttgtaaattgcgagacgaatcttttaagcctaattgtgccatgatttgataacgtggtgttacagtaaacatttgttaatgatggattaattaggcttaataaattcgtctggtagttttctggtggaatctgtaatttattttattattagactacgtttaacactttaaatatatgttcgtatatccaatgtgacaaccaaatctaaaaaattttcccgaactaaacaagtcctaaattgactgtctttgatactagtacctttttcagtcacttttctttaaaagattcttgtgttcgaaaagttggtttagttagtaactgtaaaataaaatgtgctactttactacagtggtgtgtaatgcagtttaaaatatgtgctcttcaccttcctggaaatcgtggagactgtacggtagcgtggtccgatggccaaaatcacgtggccatttgctgtaataatcgtaacaaccaaggatagcaaaaaaaaaaaaaaaaaaactacaaccgaaattaattaaagttagcagagggtggcaaaactaaagcaacacgcgcttagtataagtcgcgctcgcgcgagtagaggtggtgcgtgtcagcgtgtgtttgcctcttgtgggagggagaggcgaagccgcgaagcaggcagagccggcggctgcgcgtgccagccacggcgaggctcggcggcggcaagccccggcggccggccgagccgtgcggcggcggcggcgaggcgcggctgcccggggggaggcggcgggcggcgcggcagcagatcgggacgcgcgtcatggcgtggtggcgcgccagggtcgtcgcgcccgtgcgccgcgcgtggctcgccgtcgccgccgcccgcgcgcgcgcccgcaacggcggtaagcccaccgcccgcgccccccaactctgctcatacgtagccatctcctatgcgtattctgttgttgtataattgtagttcttggttacactggttcgagagttcagagctgattgcaagaactgataaagcagcagagataatagtaggattctgcgcaatgcaatcgagtttcacgcctctgttcttcagttcttgtatgttagactggagattttgcaaagaaagatgggattagttatagcatccacagatctagccatctacccgatgctaatgcagaagcttcaggcttcagcttactagaagatatacagtagattggtagaatgggagggagctagcctctgtgggtgtcttgcaaccaaaaagaaaaaaaaatcgcacgggaaacaaacaaatcgatcagtgttcagtactggtccatgaactccaagaatcgttgttatcttttgcttccaacctcacattgcattggaccacccaatctgcagccattaccatctttattctcacggatttgccatataattctgacgaatttcctgccaaacatcttcagaattctctctttcccttacaaatatgatcgatcgtcaatgcagagcgtggcatcctcgacctccaccaggacgtgcagacctgcgggtacgaggacgtgcaggtgatgtggaacatgctcagctcggagaaggaggcggcgccgccgccgccgcggaagcgtgcgttgtggcggctgcggctgccggtctggcccgccgccgtctggtcgccgcgcggccgaggcatgcagcagcgtgaaccgaatcctactgccgattgcaacttcgccatgtaaaacggagagaggggcatctcttcctctgcctgactgcctctgcaattgagatgttgcaagatactgtgccaaattgctcaatggctcgtgatggcctgatctattgtgtacaaagactctgtatatagttcagggcaatgtgttgctttctctgct</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0659200, RefSeq:Os06g0659200