Os06g0665500

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Revision as of 09:30, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0665500| Description = Amidase, hydantoinase/carbamoylase family protein| Version = NM_001064839.1 GI:115469409 GeneID:4341777| Length = 42...")
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Gene Name

Os06g0665500

Description

Amidase, hydantoinase/carbamoylase family protein

Version

NM_001064839.1 GI:115469409 GeneID:4341777

Length

4225 bp

Definition

Oryza sativa Japonica Group Os06g0665500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:28372310..28376534

Sequence Coding Region

28372426..28372752,28372860..28372985,28373089..28373328,28373998..28374084,28374175..28374280
,28374366..28374475,28374963..28375079,28375181..28375265,28375348..28375451
,28376185..28376267,28376384..28376474

Expression

GEO Profiles:Os06g0665500

Genome Context

<gbrowseImage1> name=NC_008399:28372310..28376534 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:28372310..28376534 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctctcctcctctcctaccccaggcgccacccatccatccacctcctcatcctctccgcctacgccctcttcctcctcccaatcttggatggattggagctgggaggagatgggctctacagggagatcctcagggatgagacggtgctcaggctcaaagaacttggcaagatatctgatggggaaggttaccttgagaggacatttttgagtcctgcctcaatcagagcctctgctgtcattatcagctggatgaaagatgccggacttaccacgtggattgatcaaatggggaatattcatggtcgatttgaaccgaccaactcaaccaaggaggccttgttgatcggatctcacatggacactgttattgatgctggcatgtatgacggagctttgggtattatctctgcaatctctgctttgaaggttttgaaagttactgggagacttcagagacttactagaccagtagaggtgattgcattcagcgatgaggagggtgttagattccaaacaacttttctgggaagcgccgctgtagctggtacactacctgaatcaattttacaagtatctgacaagagtggcacgacagttcaagatgtcctaaagctgaattctcttgagggcactgctaatgctcttggtgaagtaaggtacagcccggagtctgtcgggagttatgtcgaggttcacattgaacaagggcctgtcctggaagcccttcgttatccgcttggtgttgtaaaaggaattgcaggacagacgcgattaaaggtaattataaatggttcacaagggcatgctggcacggttccaatgaaattgcgccgtgatccgatggttgcagctgcagagctcgtcctgacactggagacgctctgcaaagaacccaacaagttcctcacctacgacgaggaatgcggctgcttcactgaggaatccctcgccggactcgtctgcaccgtcggcgagctcctgacatggcccagcgccagcaacgtcataccaggccaggtgaacttcacggtggacatacgcgccatggacgacaaggtgagggagacgatcgtcaccagcttctcgaggcttgttcttcagagatgcgacgacagattggtcgactgcgccgtcgagcagaagcacgcggcggcggcgacgccgtgcgacgcggagctgacgtcgcggctggagcgcgcgacgcggtcgacgatctcgtcgatggcggcgggcgtgcgccgggccggcggcgagacgccggtgctgatgagcggagcggggcacgacgcgatggcgatggcgaggctgacgaaggtggggatgctgttcgtgcggtgccgcggcggcgtgagccactcgccggaggagtccgtgatggacgacgacgtctgggccgccggcctcgcgctggtcaacttcattgaccagaacgcggtggatgcggcggcggcgacggcggcggaatcgtga</cdnaseq>

Protein Sequence

<aaseq>MALLLSYPRRHPSIHLLILSAYALFLLPILDGLELGGDGLYREI LRDETVLRLKELGKISDGEGYLERTFLSPASIRASAVIISWMKDAGLTTWIDQMGNIH GRFEPTNSTKEALLIGSHMDTVIDAGMYDGALGIISAISALKVLKVTGRLQRLTRPVE VIAFSDEEGVRFQTTFLGSAAVAGTLPESILQVSDKSGTTVQDVLKLNSLEGTANALG EVRYSPESVGSYVEVHIEQGPVLEALRYPLGVVKGIAGQTRLKVIINGSQGHAGTVPM KLRRDPMVAAAELVLTLETLCKEPNKFLTYDEECGCFTEESLAGLVCTVGELLTWPSA SNVIPGQVNFTVDIRAMDDKVRETIVTSFSRLVLQRCDDRLVDCAVEQKHAAAATPCD AELTSRLERATRSTISSMAAGVRRAGGETPVLMSGAGHDAMAMARLTKVGMLFVRCRG GVSHSPEESVMDDDVWAAGLALVNFIDQNAVDAAAATAAES</aaseq>

Gene Sequence

<dnaseqindica>3783..4109#3550..3675#3207..3446#2451..2537#2255..2360#2060..2169#1456..1572#1270..1354#1084..1187#268..350#61..151#gctgtgggaagggaagagccagagaggccacacacacacaagcacaacacaaaagtggccatggctctcctcctctcctaccccaggcgccacccatccatccacctcctcatcctctccgcctacgccctcttcctcctcccaatcttgggtgggtcttggttcttggatcatccacttcattgccatctatcagaaattgcttcttctttctgattttgtttctttgtttgtgatggatgtttttttgtggtgtctgattgttagatggattggagctgggaggagatgggctctacagggagatcctcagggatgagacggtgctcaggctcaaagaacttggcaaggtcaggttcttcatgtcgttggaatattcagttctttgatccactttttaaggggaatctcgtccggattgtatagattgtttgggctcctgcatgctgctacctctgtttgttgctaattcagatagcttcataattggaaatataaattaattctaggtgttatatgtggacagctattgacacccaaatgaccatatataggtttaaaaaaatatctgtggggttcatgtgtgtacacttctttgttcatcagatgaacagtgtaaatttcatttttaggatacaatttcactctttcctcggagagaatacaatttcattttgtataacttaccagtacagaccatatcaagacagctagctgcaggctactcgaaaattatgcaaaaggattgcaaatatattctaggcttctcatctcttcttttttggggtgaatttcattttactaggcgttaaagcatcaaacttttgtaaggcttttgttccttttctctattagttatgtttattggtcattccaaagaatcatatccatctcctgtattcgggtgagatgaccttacgctatgaaggttgctcaatttttacgttctccagttgaaatattaaatatatataaactgaacaaaatcctggtttcaaagatccgtgctgcaccttatttttactctattgcctaacagtttagccatgcagtcctaacacggcgtcgttttgtgtgaatcagatatctgatggggaaggttaccttgagaggacatttttgagtcctgcctcaatcagagcctctgctgtcattatcagctggatgaaagatgccggacttaccacgtagatttttcttctcttgtttatactgcagtcattttctcaaactttgacctttgctgaccaatatatgccttatattaaggtggattgatcaaatggggaatattcatggtcgatttgaaccgaccaactcaaccaaggaggccttgttgatcggatctcacatggtgagaaatagatatatcttttcatactgtcgcacatcttctagttaaataaaatcactgataaaaaaaataaatcttgtttttttttggggggaaaacaggacactgttattgatgctggcatgtatgacggagctttgggtattatctctgcaatctctgctttgaaggttttgaaagttactgggagacttcagagacttactagaccagtagaggttagataaaaattaattaccctagataaaatgttttcatcagtgtgctagtgatgttactactttatcatcatagtttgtttctttcataagaatatatgtattgggttacattagtcgctatcctactccttactagttgcatgatgagtcacatgtgtcctacaaataagacatttatctgcacataacttgtctctgtcttgtgtattttactagtatcttagtatgtgtcatccacatcatcgatctcgtgttgatttaaattagcatagtaggtttcaaagaacgtgaatgggctgctatcacaatagattatcagaaagactacagatatagacatatttaatccaggatgaatccattatataatgtctctttactcagttggctgtttccctgcttatgtagagaagaacctataccttattctgatatctataattcataaagctgttgggcctcacggttgcctggtaaacctcaggtgattgcattcagcgatgaggagggtgttagattccaaacaacttttctgggaagcgccgctgtagctggtacactacctgaatcaattttacaagtatctgacaagaggttgtcttttttcgcataaatcaaccgaactgttttttgaaattgtttgctgattcagtatatattttgcattcaacttcttcagtggcacgacagttcaagatgtcctaaagctgaattctcttgagggcactgctaatgctcttggtgaagtaaggtacagcccggagtctgtcgggagttatgtcgaggtatacaagactgtattattttaatctaggtgtataacagatataagaaatttagcatttaccattctttttcattactattttggttaggttcacattgaacaagggcctgtcctggaagcccttcgttatccgcttggtgttgtaaaaggaattgcaggacagacgcgattaaaggtgcaatcactttctagttaatacttttttggtcaagagtaagcggtgacacttatagaactatatatgtgagccaaaacaaaaatatgacttgtttctgaaaacaaaactaaaagatgaccaggtagcattgcatactaaatttagaccaacttttccaaacaattggcatgctaaaatgaccaggacctagtaaacaatcaagtaagcaattatattgctggtcattctttagcaaagaatgtcagtgctcgaagtcaacgctgaggtcaggtactattaatcagtgacaactgaagaactttattagtacttcacaagattctcgtttaacaaactattttgaaagactgcaccagcgtagagttggtacttgcaaatcaagtaaaatgttatagcatgagctttctttaataaacagtgataaccagcttagctgactatcaccaaggttgatgtttgatattgttctgaattatccaaatccgttaatctcagtgtgattttagcatgagcagtgcttccttacactacaaaaactaattaaactagttttcaatctcgatgcccacagtaacagattagtaggtgctggccaaaatataatcgatcaaacaagctgggcttgctttcaactgccattgcttagcaactttctggtttctttaggtaattataaatggttcacaagggcatgctggcacggttccaatgaaattgcgccgtgatccgatggttgcagctgcagagctcgtcctgacactggagacgctctgcaaagaacccaacaagttcctcacctacgacgaggaatgcggctgcttcactgaggaatccctcgccggactcgtctgcaccgtcggcgagctcctgacatggcccagcgccagcaacgtcataccaggccaggtaatgtaatgtataattcagcttgatcattgctggtgatgatgcttccaggtaagctaagctggctctgctgaagcttttggagtttggtgatcttatgcaggtgaacttcacggtggacatacgcgccatggacgacaaggtgagggagacgatcgtcaccagcttctcgaggcttgttcttcagagatgcgacgacagattggtcgactgcgccgtcgagcagaaggtgccaagaaaccgaagcatttcgcttgtgatttcgcgatgttttttttgttttgcaggtggtctggtgttaaaactgcggattggttggtgtttgtttttttgcagcacgcggcggcggcgacgccgtgcgacgcggagctgacgtcgcggctggagcgcgcgacgcggtcgacgatctcgtcgatggcggcgggcgtgcgccgggccggcggcgagacgccggtgctgatgagcggagcggggcacgacgcgatggcgatggcgaggctgacgaaggtggggatgctgttcgtgcggtgccgcggcggcgtgagccactcgccggaggagtccgtgatggacgacgacgtctgggccgccggcctcgcgctggtcaacttcattgaccagaacgcggtggatgcggcggcggcgacggcggcggaatcgtgacgacgacggcggcgattcttttggtaggtgtgtgcctagtagcctacaaattgtaaatatggatttgcttgttacatttgtcaagaaataaaattgaattcaattcgttgagacgt</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0665500, RefSeq:Os06g0665500