Os06g0668200

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Revision as of 09:30, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0668200| Description = Similar to Phosphoglycerate kinase, cytosolic (EC 2.7.2.3)| Version = NM_001064852.1 GI:115469435 GeneID:4341792| Le...")
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Gene Name

Os06g0668200

Description

Similar to Phosphoglycerate kinase, cytosolic (EC 2.7.2.3)

Version

NM_001064852.1 GI:115469435 GeneID:4341792

Length

3242 bp

Definition

Oryza sativa Japonica Group Os06g0668200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:28553512..28556753

Sequence Coding Region

28553774..28553968,28554045..28554203,28554532..28554849,28555190..28555450,28555556..28555633
,28556362..28556556

Expression

GEO Profiles:Os06g0668200

Genome Context

<gbrowseImage1> name=NC_008399:28553512..28556753 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:28553512..28556753 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgagcaagaggagcgtgggcaccctgacggagtcggatctgaaggggaagaaggtgttcctccgcgccgatctgaacgtgccgctggatgacagccagaagatcaccgacgacacccgcatccgcgcgtcggttcccaccatcaagttcttgatggggaagggcgccaaggtcatcctggccagccatctgggtcgcccaaaaggtgtaaccccgaagtacagcttgaagcctcttgttccgcgcttgtctgagcttcttggtgttgatgttgtgatggccaatgactgcatcggtgaggaagtccagaaattggctgccactttaccagatggtggtgttctgcttctagaaaatgttcggttctacaaggaggaagagaaaaatgaccctgaattcgccaataagctggcatctgttgctgacctttatgtaaatgatgcctttggcacagcacacagagctcatgcttcaacagagggagttacgaagtatttgagaccttctgttgctggtttcctcatgcagaaggaacttgactatcttgttggagctgttgccaaccccaaaaaaccatttgctgccattgttggtggatccaaggtgtcaacaaagattggggtgattgagagtcttttggcaaaggttgacatcctcatactgggtggtggtatgatctatacattttacaaggctcagggatacgctgttggaaaatctcttgtggaggaagacaagctcgaattggctacctcgcttattgaaaaagccaagtcaaagggagtctccctattgcttccaactgatattgtagtagctgataagtttgctgcggatgcagagagcaagactgttccagcatctgctatccctgatggttggatgggccttgatattggcccagactccatcaagactttcagtgaaactttggatactaccaagactgtcatctggaatgggcctatgggagtgttcgagtttgagaaattcgctgctggcactgatgcaattgccaagaaattggctgatatcaccgccaaaggtgttacaacgatcattggaggtggcgattctgttgctgctgtcgagaaggccgggttggcggacaagatgagccacatttcaacgggaggtggcgcgagcttggaactgttggaaggcaagaccctcccaggagtccttgctcttaatgacgcataa</cdnaseq>

Protein Sequence

<aaseq>MASKRSVGTLTESDLKGKKVFLRADLNVPLDDSQKITDDTRIRA SVPTIKFLMGKGAKVILASHLGRPKGVTPKYSLKPLVPRLSELLGVDVVMANDCIGEE VQKLAATLPDGGVLLLENVRFYKEEEKNDPEFANKLASVADLYVNDAFGTAHRAHAST EGVTKYLRPSVAGFLMQKELDYLVGAVANPKKPFAAIVGGSKVSTKIGVIESLLAKVD ILILGGGMIYTFYKAQGYAVGKSLVEEDKLELATSLIEKAKSKGVSLLLPTDIVVADK FAADAESKTVPASAIPDGWMGLDIGPDSIKTFSETLDTTKTVIWNGPMGVFEFEKFAA GTDAIAKKLADITAKGVTTIIGGGDSVAAVEKAGLADKMSHISTGGGASLELLEGKTL PGVLALNDA</aaseq>

Gene Sequence

<dnaseqindica>2786..2980#2551..2709#1905..2222#1304..1564#1121..1198#198..392#tcgtatccaaactctcctttaccccaatctcgtgagcggcgacgaactttgccaccgatttcgatccttttttttggcaggtaaatcttacctcatctcccctgatcgctccgatttatggattgcaaggccgtcgtgcgaatttttgagattttcggggtcggatttggtgcagcgtgtagtgacgcgagagagaaatggcgagcaagaggagcgtgggcaccctgacggagtcggatctgaaggggaagaaggtgttcctccgcgccgatctgaacgtgccgctggatgacagccagaagatcaccgacgacacccgcatccgcgcgtcggttcccaccatcaagttcttgatggggaagggcgccaaggtcatcctggccagccatctggtgaggattactacgttgctataatgtgtttgagcatgaggttgtgtgatatgtgagattggtggtccgttttggatgatgtgacatgctatataaacagtatcgattttatgattcatcaaagggtgataggttcacagtgaattttaagtggtaactatgtgcagattcatggttacgataggaggttaaggtgtcaatataaatttaatactgtatttttagactgattacagtgagcgatgatttcacagagtaatgttttgagtgatcttttatttatcttgcgattttactaccagaatgtggcatttgttacttaattgtgttgttattatgtatatctaattttgatacaaatacctattaatggtttccatcaatgcccaacacttgcttgcaagaggcacaattcccttttacaaaatcactgtaatgcaccacggtttctttaaactttggttctcctatgttgtgtaagtcaaatgcaaaatccacctctgtaacattttggttatagaaagagccacatgtttaaagtgcagtagtcctcaaaaatccccatgccatataattgggttatgttaaaatggcaaatgaaactgaaattgtatgttcaaaaaagggcagcagctaaccgtgtttctatgcttgggataatgttctttcgcccccctttttgttttctcttgtcctctgttgtaatgcaatcaattttgtcttttcagggtcgcccaaaaggtgtaaccccgaagtacagcttgaagcctcttgttccgcgcttgtctgagcttcttggtgttgatgtatgctataaaaggataaatcatatttattattctgcaattctgcttactacaaactggtagaccatcttatatttccatgttttgatgatgtccttgtcgtaggttgtgatggccaatgactgcatcggtgaggaagtccagaaattggctgccactttaccagatggtggtgttctgcttctagaaaatgttcggttctacaaggaggaagagaaaaatgaccctgaattcgccaataagctggcatctgttgctgacctttatgtaaatgatgcctttggcacagcacacagagctcatgcttcaacagagggagttacgaagtatttgagaccttctgttgctggtttcctcatgcagaaggtattgcacaagtttccttactttgtgcattgctcaagattttcaccatctgaactgttttgacataactgtttggtgaacataatttcgtttggtgtttacttactgatatactccatttagaacaatgaaactccttcaagttgcaagcagcagatggcttgcagcagtacttgagtgacaagttgcaagacatgttgaaatcaactacattctttttgccaaattgcatattgtcttttaaattgtatccgcaatgaattcaagctgtttttccttgagattttttgaaatatgtaatccttttaaaattttgtagtaactgtcctcaccaatctaggaacttgactatcttgttggagctgttgccaaccccaaaaaaccatttgctgccattgttggtggatccaaggtgtcaacaaagattggggtgattgagagtcttttggcaaaggttgacatcctcatactgggtggtggtatgatctatacattttacaaggctcagggatacgctgttggaaaatctcttgtggaggaagacaagctcgaattggctacctcgcttattgaaaaagccaagtcaaagggagtctccctattgcttccaactgatattgtagtagctgataagtttgctgcggatgcagagagcaaggtttgttcattacctcgtgaatggcactgcataagaatttcatttcactgcatcatacaatcatagttgaatatatgaaaatggtttttcagtagcacaacattgtaaatgtgaacttgctgccatggcaatgttcttttgaagtagtcattcataaatcatggcttaaattcactgcgtcatatgccaaatatctgcattcagcattcgccttctgtatggccagttgcctggtaaatggattcagcaaacaaacaatatcagagagtacttgcgactacaattctgcagttatcctgtagaactgacaatatgaaaccatatgcagactgttccagcatctgctatccctgatggttggatgggccttgatattggcccagactccatcaagactttcagtgaaactttggatactaccaagactgtcatctggaatgggcctatgggagtgttcgagtttgagaaattcgctgctggcactgatgtgagtactgtttttgaacagatttatcagcacaggtttttgtgtttgaagctaaatgtgttcttaatcaattcaggcaattgccaagaaattggctgatatcaccgccaaaggtgttacaacgatcattggaggtggcgattctgttgctgctgtcgagaaggccgggttggcggacaagatgagccacatttcaacgggaggtggcgcgagcttggaactgttggaaggcaagaccctcccaggagtccttgctcttaatgacgcataagactggtggcaagcatatgacgcaatttccctagccttttgcggtggtcttgttcggaccttggtgtaagtttgtaagaatgcaaagtcagtcgtctgctacctttgaacttgaaataggcttcgcttcaggtattgctagatgacagtgaataataataagcttttggcgtcctcggcatgagagaaatgcccggcacaaacaaactataatggtgtactatattttgccatattctagttgcagcagtttacactaagct</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0668200, RefSeq:Os06g0668200