Os06g0675600

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Revision as of 09:31, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0675600| Description = Similar to GRAB2 protein| Version = NM_001064881.1 GI:115469493 GeneID:4341823| Length = 4313 bp| Definition = Oryz...")
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Gene Name

Os06g0675600

Description

Similar to GRAB2 protein

Version

NM_001064881.1 GI:115469493 GeneID:4341823

Length

4313 bp

Definition

Oryza sativa Japonica Group Os06g0675600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:28914571..28918883

Sequence Coding Region

28914857..28915076,28917070..28917341,28918220..28918642

Expression

GEO Profiles:Os06g0675600

Genome Context

<gbrowseImage1> name=NC_008399:28914571..28918883 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:28914571..28918883 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcgggatgaattcgctgagcatggtggaggcgaggctgccgccggggttcaggttccacccgcgagacgacgagctcgtgctggactacctggaaaggaagctcctcgacggcggcgtgggcggcgccgcggcggcggcggcggcggtcaccatctacggctgcccggtgatggtcgacgtcgatctcaacaagtgcgagccatgggaccttcctgagatcgcttgcgttggtggcaaggagtggtacttctatagccttagggataggaagtatgcaactggccaacgaacaaatagagcaaccgaatcgggctactggaaggccacaggaaaagatcgcccaataagccggaaaggattgctcgtcggtatgcgaaaaaccctggtgttctacaaaggtagagcccctaaggggaagaagaccgagtgggtcatgcatgaattccgcaaagaaggacaaggggatccgatgaagttgcctctcaaggaggactgggtcttgtgtagagtcttctacaagagtaggacaaccattgccaagctgccaacggagggtagctacaacaatattgacagtgtggccacaacttcactgcctcccctcactgacaactacattgcatttgatcagcctggttcaatgcaaaacctagagggttatgagcaagtgccctgcttctccaataatccctctcaacagccatcgtcgtcgatgaatgttccgttgacatcggccatggttgatcaagagcaaaacaatatgggtagggcgatcaaggatgtgctgagccaattcaccaagtttgaaggcaatgtgaagagggaggcccttcaaagtaatttttcccaggatggatttgattacttggctgagagtggcttcacacaaatgtggaactcactcagttga</cdnaseq>

Protein Sequence

<aaseq>MSGMNSLSMVEARLPPGFRFHPRDDELVLDYLERKLLDGGVGGA AAAAAAVTIYGCPVMVDVDLNKCEPWDLPEIACVGGKEWYFYSLRDRKYATGQRTNRA TESGYWKATGKDRPISRKGLLVGMRKTLVFYKGRAPKGKKTEWVMHEFRKEGQGDPMK LPLKEDWVLCRVFYKSRTTIAKLPTEGSYNNIDSVATTSLPPLTDNYIAFDQPGSMQN LEGYEQVPCFSNNPSQQPSSSMNVPLTSAMVDQEQNNMGRAIKDVLSQFTKFEGNVKR EALQSNFSQDGFDYLAESGFTQMWNSLS</aaseq>

Gene Sequence

<dnaseqindica>287..506#2500..2771#3650..4072#ctggcacgcgaaccaagaaaagtctctctctcctctcctctcttcttcatcaacacacactggttgaccaaccagctagctgatcgagttcgttgtttaccatcctattaataccccttcctctctctcttctcccctcctgaatttctctcttggtagaggtagaattgatctcctttcttgttcttcttcgagttcttcttaattggagttcttggagcagcatcggtagtcgtcgtcttcgtcgatccagcatctcaaggaattcgaggaggagggggtgggcatgagcgggatgaattcgctgagcatggtggaggcgaggctgccgccggggttcaggttccacccgcgagacgacgagctcgtgctggactacctggaaaggaagctcctcgacggcggcgtgggcggcgccgcggcggcggcggcggcggtcaccatctacggctgcccggtgatggtcgacgtcgatctcaacaagtgcgagccatgggaccttcctggtaagacctagctataagctagctacagatcatagatcatcgagcttgcttgcttgcatccatgctactcatgtcgtggtgatcttgctcttctttctcgtcttccaccgcctctggatcatcatatgcgtgcttgttcatggccatgattggtttgagtttttttcttccagattctttctctctactgattgatctgctctgaaatgaattaattcgtgtgcttttttttgaggggggaaaattaaccgcgtgctgtttttcgtgtagtttttgtttaatttctctatagatcggtagctaggcttctcaaattaacaaccttttgatttgttctacctctaaaaacaaatcaccctatgattctatatttatatgatagaatcaataatggtatgatgatctgtttaaacagacaagtctttccatgtactagctagctaggacccagcagcctgcagaattctgtcagttttagaataagatcaactgatcattccacaattattagctgtttgtgcacacacgcatctaaggttgccaatcatgtgtttatctagctagctaacttgcagttggttctgcagaaatcagtacttgaattcaagatcttggtaacaactcatcttttctctctttttcttgatgtacaaaaagaacaagatcttggaaccaaccataacttctatctattccaagaaaattctctttgttcctttcctacatgcctccaatgtttttccttcaatgggcacagatatatactagtatagtagtagctaccttcttgatccaatcaattgcatccaaattgaaggtgatgcctgtccatgtatgcatgtcagttgatccttttctacagcaaaggtagccataactgaagtgatcatgacctcttctgcaactctcatatatagatcaagttgcatatttcaactatgcatacatgctagcttcccatacctcaagaatcatgccttctctttttctttagttcctcccccttttttgccccctttttttggggtgtgcccatgcccttaatttgtttttagttattggaattatttttttttgccacaacatttaatgtttctctctgtttgtgtacatatagctgcaagctaaccgtttgaaaagtcttgagccaacgcaagaaatatcagatagtgagatcacatgccccaaattaaaatgcataaatttgtggggtggctaatgatttgtttgttacaaacaaaacagtccggcattttttaaattctgtttcaagtggaggctagctagctagcttgatcagatgattttcctgaaatctacaaacgagaacaaaattcacacgtcttgtctgcctccatcttgtcgccttctcctccccataacagaaggatattctcactgctatgagtttgtttggcctcttcttggccttctcctccttatctgtccctgttgctgccatgcaatcaaatattctcccactttgcctgatccttaaagggaattaacagccagtggatggggacaaacttaacaccaaaagaggccctctcactttgcctattagtagaatatagccaggaaatcatgtaaaaaggttataaattaaagaaaaatgtgtgctgaatgggataaatacgataattaattgattctatatagacctttcgaaaaaatagcaaatatgatgctgttcctagctagctcattgtacttttcctcctcataccccccctaaccctctcttctcgtctcttctcaacacgtacatgcatcaattgttaatgcaaattttctctatattaattgtgttgatttctcttgtacgtactttctagttgtctttcttacttagatggctatgctaataattagccaagtttgtgtttccatgtttatgagtaaattgatcattaggctaattaatggctttacatttttctgaaattatatgttagtcttttgttgattgtttattttttcttgcattcagagatcgcttgcgttggtggcaaggagtggtacttctatagccttagggataggaagtatgcaactggccaacgaacaaatagagcaaccgaatcgggctactggaaggccacaggaaaagatcgcccaataagccggaaaggattgctcgtcggtatgcgaaaaaccctggtgttctacaaaggtagagcccctaaggggaagaagaccgagtgggtcatgcatgaattccgcaaagaaggacaaggggatccgatgaagttgcctctcaaggtacgtattatatttttaatacattcttaatttataaatataaatattattcctttgttggattctccatgtaaaatatccatttactagatgccaatcctttatttatgcacttatttgttgattcttgtatatattatatatgtatatgatgtctaaaatataatagactttgtacaagccaatcctttatttatgcacttatttgttgattcttgtatatattatatatgtatatgatgtctaaaatataatagactttgtacaagcgagaagtatcgggtttggtagtcagtatgaaataaagaattattaattaaataattaacttcatatgatatttattacacaagaaggagaccgactggaatgccaagttgttcttcatttgaataacacatatgcaatggataatggaatgacaactatctgtgtacatgtcctctcctgatctcataacttcatgattgaaaagtgagaaataccaaatttaagcacactttcatgataatttaggtgtcatatgaggaggtgaatatgctaagtatctcattttttatgattagaacatcatcgatacttaatatattgacatgatgttattagttaatgctaacgaggttcaattttaatttggaagttattctttacttccatgtcactctcatgccagctctaaatgagttatgttctcttctagatacacctcaatagatgcatgtgcaactattgactcagttctataaagcattcatgtctctttccaataatttcttaatgtgtgagatgctctctccaaacaattaatagaagagaattaaaacaaactacttatttatcataaatgtaatcttcatccaatgtttttatgtgaacaggaggactgggtcttgtgtagagtcttctacaagagtaggacaaccattgccaagctgccaacggagggtagctacaacaatattgacagtgtggccacaacttcactgcctcccctcactgacaactacattgcatttgatcagcctggttcaatgcaaaacctagagggttatgagcaagtgccctgcttctccaataatccctctcaacagccatcgtcgtcgatgaatgttccgttgacatcggccatggttgatcaagagcaaaacaatatgggtagggcgatcaaggatgtgctgagccaattcaccaagtttgaaggcaatgtgaagagggaggcccttcaaagtaatttttcccaggatggatttgattacttggctgagagtggcttcacacaaatgtggaactcactcagttgatttaatttcgaaggagatatatattgattgttgcgaattgaggaggaaactcttaaagtgtgcttatgtgctattgcatgtaattgtgatatagacgtatagtaccattctagttcacattatttgcaaaaaaaaaggggtgatcaaaagagatattatcatcatcaatgatgtaaatacattatttgtgtactagggtgtgataaaaaaaattagtgcatgatgctaaaattaatggtat</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0675600, RefSeq:Os06g0675600