Os06g0676700

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Revision as of 09:31, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0676700| Description = Similar to High pI alpha-glucosidase| Version = NM_001064888.1 GI:115469507 GeneID:4341833| Length = 5062 bp| Defin...")
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Gene Name

Os06g0676700

Description

Similar to High pI alpha-glucosidase

Version

NM_001064888.1 GI:115469507 GeneID:4341833

Length

5062 bp

Definition

Oryza sativa Japonica Group Os06g0676700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:28977803..28982864

Sequence Coding Region

28977930..28978165,28979255..28979907,28979995..28980225,28981163..28981803,28981880..28982779

Expression

GEO Profiles:Os06g0676700

Genome Context

<gbrowseImage1> name=NC_008399:28977803..28982864 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:28977803..28982864 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgacgagagctcggccgccattggtgctattgctgtgtctctgcttggcttcttgcttgagctcggccattggtggcgtttcagctgccggcaatggctaccggaccacggcattcctggtggatgaggaagggaggcggctcagagccgagctcgccgcagtcgccggcgccggcggcgggtccacggcggcgtacggcgacgacgtgcagaggctagacgtgtatgccagcctggagacggacagccggctgcacgttcgcatcgccgacgccgacggcccgcgatgggaggtgccccaggacgtcatcccgcgcccctcgccggagttcttcctccagacgtcgcgtccgggccggcccgtcctctccacggcgacctccgacctcaccttcgccatccacgcctcctccccgttccgcttcgccgtctcccgccgctccactggcgacgtcctcttcgacacctcccccaacctcgtcttcaaggatcgctacctcgagctcacctcctcgctgccgccgcccggccgcgcgtcgctgtacggcctcggcgagcagaccaagcgcacgttccggctccagcggaatgacaccttcacgctctggaactccgacatcgccgccggcaacgtcgacctcaacctctacggctcccaccccttctacatggacgtccggtcaggcggcggcggcgcggcgcacggcgtgctcctccttaacagcaacggcatggacgtcatctatggtggatcgtacgtcacctacaaggtgatcggcggcgtgctggatttctacttcttcgccggcccgtcccctctcgccgtcgtcgaccagtacacccagctcatcggccgccctgcccccatgccgtactggtcattcgggttccaccagtgcaggtgggggtacaagaacgtgtctgacctggagggcgtggtcgccggctatgccaaggcgaggatcccgctggacgtgatgtggacggacatcgactacatggacgccttcaaggacttcacgcttgatccggcgaacttcccggccgacctgctccggccgttcgtcgaccgcctccaccgcaacggccagaagtacgtcgtcatcattgacccagggatcagtgtgaacgcgacgtacgggacgttcatccgagcgatcaaggaggacatcttcttgaagtggaacgggagtaactacctcggtgtggtgtggccggggaacgtctccttcccggacttcctcaacccgcgcgccgccgagttctgggcgcgcgagatcgccgcgttccggcggaccctccccgtcgacgggctgtggatcgacatgaacgagatctccaacttcgtcgacccgccgccgctcaacgcgctcgacgacccgccgtaccgcatcgacaactccggcgtgcgccgccccatcaacaacaagacggtgccggcctccgccgtgcactacggcggcgtggccgagtacgacgcgcacaacctcttcggcttcctcgaggcgcgggccacgcacgacgcgctgctccgtgacaccggccgccgcccgttcgtgctcagccgctccacgttcgtcggctccggcaggtacaccgcgcactggaccggcgacaacttcgcgacgtgggacgacctccgctactccatcaacactatgcttagcttcggcctcttcggcatccccatgatcggtgccgacatctgcggcttcggcggaaacaccaccgaggagctctgcagccgatggattcagcttggcgcgttctacccgttctcgagggaccactcggcgatcggcaccgtccggcgagagctgtacctgtgggaatcggtggcgaggtcggcgaggaaggcgctcggcctgcgctaccggctgctcccctacttgtacacgctcatgtacgaggcgcacaccacgggcgcgcccatcgcgcggccgctcttcttctcctaccccggcgacgtcgcgacgtacggcatcgacaggcagttcctgctcggccgcggcgtgctcgtgtcaccggtgctcgagccgggcgcgaccaccgtcaccgcctacttcccggcgggacggtggttcagcctctacgacttctccctcgccgtcgccacgaagaccggcaagcgcgtgacgctgcccgcgccggcggacacggtgaacgtgcacgtcgccggcgggaacatcctgacgctgcagcagcccgcgctgacgtcgtcgcgcgtgcgccagagcgtggtccacctcctggtcgccctcgccgaggacggcacggccaccggggatctcttcttggacgacggcgagtcgccggagatggtcggggcgcggagcaggtggagccagatcaaattcagcggcgcgaccgagagcggcggcagcgtcgtcagagtgaggtcgcacgtggtgcacgactcgtacgcgccgagccggacgatggtcatcgccaaggtggtgctcatggggcttcgatcgccggtgccgcccaaggggttcgccgtttatgccaacggcgtccaggtgaacgcgagcacggcggtcgacggcggcggcggcgggaacccggagaagggagcgctgggcgtggcgcacgtcggcgggctgtcgctggtcgtcgggcaggagttcgatctcaaggtcgttatgacctattaa</cdnaseq>

Protein Sequence

<aaseq>MATRARPPLVLLLCLCLASCLSSAIGGVSAAGNGYRTTAFLVDE EGRRLRAELAAVAGAGGGSTAAYGDDVQRLDVYASLETDSRLHVRIADADGPRWEVPQ DVIPRPSPEFFLQTSRPGRPVLSTATSDLTFAIHASSPFRFAVSRRSTGDVLFDTSPN LVFKDRYLELTSSLPPPGRASLYGLGEQTKRTFRLQRNDTFTLWNSDIAAGNVDLNLY GSHPFYMDVRSGGGGAAHGVLLLNSNGMDVIYGGSYVTYKVIGGVLDFYFFAGPSPLA VVDQYTQLIGRPAPMPYWSFGFHQCRWGYKNVSDLEGVVAGYAKARIPLDVMWTDIDY MDAFKDFTLDPANFPADLLRPFVDRLHRNGQKYVVIIDPGISVNATYGTFIRAIKEDI FLKWNGSNYLGVVWPGNVSFPDFLNPRAAEFWAREIAAFRRTLPVDGLWIDMNEISNF VDPPPLNALDDPPYRIDNSGVRRPINNKTVPASAVHYGGVAEYDAHNLFGFLEARATH DALLRDTGRRPFVLSRSTFVGSGRYTAHWTGDNFATWDDLRYSINTMLSFGLFGIPMI GADICGFGGNTTEELCSRWIQLGAFYPFSRDHSAIGTVRRELYLWESVARSARKALGL RYRLLPYLYTLMYEAHTTGAPIARPLFFSYPGDVATYGIDRQFLLGRGVLVSPVLEPG ATTVTAYFPAGRWFSLYDFSLAVATKTGKRVTLPAPADTVNVHVAGGNILTLQQPALT SSRVRQSVVHLLVALAEDGTATGDLFLDDGESPEMVGARSRWSQIKFSGATESGGSVV RVRSHVVHDSYAPSRTMVIAKVVLMGLRSPVPPKGFAVYANGVQVNASTAVDGGGGGN PEKGALGVAHVGGLSLVVGQEFDLKVVMTY</aaseq>

Gene Sequence

<dnaseqindica>128..363#1453..2105#2193..2423#3361..4001#4078..4977#aaatgaccggtcggtccgtccgtccattcacgcggcttaagaagggcatccatggcgaccttgacgattcagtagcattaggccattagcatcgcaagctgccccctctccgtctccggtgcgatcgatggcgacgagagctcggccgccattggtgctattgctgtgtctctgcttggcttcttgcttgagctcggccattggtggcgtttcagctgccggcaatggctaccggaccacggcattcctggtggatgaggaagggaggcggctcagagccgagctcgccgcagtcgccggcgccggcggcgggtccacggcggcgtacggcgacgacgtgcagaggctagacgtgtatgccaggtgcgcgcagctccattttagcattttttaccgcaattgttcgatgagctagctagctttaattttagcttttctttccgagaattgctaagatcaattaattcttgagctctactcctagagggcagcagggagtaccagctaatcaccgttatttttttttataaaatatgatttctagaagagccaaaatgccaaaaaaaaaaaagaaatctaggattctccaggacggcttatccggtgctagattatgatattaagagagagacattaccccttagaccaagtttaaaacagattattatggattagcttaggaaaaggatctaaacaacgtgctagaagaactttttttagaaaacatattttctacatccgtacaacaaataatacagaacaataataaagtgaaatgaccaaaaagaacaaggccgaagtttatgatattacaagtagagatgctgaattgctgattggtcgattatacatgtataatccgtacaatgattaggacaacgtactagataagtcatctagaagagaagactgcttacaaaaaaaacaagagaccacagagcgacaaagccacagagggttaaaaccttaggtctgttttttcttcaactccaatctacaattttagcattttcaattaattcattttttaaattattaaatgatatgttttctaaaaaaccttcttacataaaagtttctttaaaaaataaataaacctacttttaaaattaataacattaacatttatttatttattattttaatggtttatctgtgaagctaaaaagctaaatgagattccaattggcaaaatcaaactgttttaagtttgactaaatttatagaaaaaaatagtaatattttttactcaagataaatttattataaaaatatatttaattattaatttaataaaactaatttagtaatgtaaatattactatatttatatataaacttagtcaaacttaaagcagtttaactttgacgaaaatccaaacatcttgtaacctgaaacggagggagtacaagataatcaccgttattttttttttggctcgccggcggcagcctggagacggacagccggctgcacgttcgcatcgccgacgccgacggcccgcgatgggaggtgccccaggacgtcatcccgcgcccctcgccggagttcttcctccagacgtcgcgtccgggccggcccgtcctctccacggcgacctccgacctcaccttcgccatccacgcctcctccccgttccgcttcgccgtctcccgccgctccactggcgacgtcctcttcgacacctcccccaacctcgtcttcaaggatcgctacctcgagctcacctcctcgctgccgccgcccggccgcgcgtcgctgtacggcctcggcgagcagaccaagcgcacgttccggctccagcggaatgacaccttcacgctctggaactccgacatcgccgccggcaacgtcgacctcaacctctacggctcccaccccttctacatggacgtccggtcaggcggcggcggcgcggcgcacggcgtgctcctccttaacagcaacggcatggacgtcatctatggtggatcgtacgtcacctacaaggtgatcggcggcgtgctggatttctacttcttcgccggcccgtcccctctcgccgtcgtcgaccagtacacccagctcatcggccgccctgcccccatgccgtactggtcattcggtaagctagctctctgttttgctctgcttcttcttgcatgatctcgccgccgacattgtccgacattgttgcggtgcgtcgttgcagggttccaccagtgcaggtgggggtacaagaacgtgtctgacctggagggcgtggtcgccggctatgccaaggcgaggatcccgctggacgtgatgtggacggacatcgactacatggacgccttcaaggacttcacgcttgatccggcgaacttcccggccgacctgctccggccgttcgtcgaccgcctccaccgcaacggccagaagtacgtcgtcatcattgacccaggtacacaagatcgatggatcgcttcaatggtgaaattttgatcggtgaaattttgagcaaaatttagttgaatttgaacaaatattaccaaaaattcatgaaataaataaataaataaataaattcggccaaaataatgtcgtatcggagggggtccaaaatgaccgaaatttcagtccgaaatttccaaccctgattctgtcatcagtcgggaaactcttttaatcacccggtggatgtccacccgtttattgcatgtcatctaaatagttatgaaatttttttaaaaaaattgacaagatagatcaatatgtaatatatcacttcacaaatatgaaagttaaaattaaacttctacaaattgtaacaaaaataacttaaattagcatactcatatttgtagttgaatttgttatttttgttacaacttgtaaaagttgaatttgaacttgcatatttatggagcgatatattacatataaatatatcttgttaatttttaaaaaaaatttcataactatttaggccatgtttctttcagcttgggattattataatcatgattattaggagtaagctgaaaaaaacagacaacttattgaaatagcttattataatctagagcccaacttattataatctgataagctcatttaggtgagctttttccagattattgggtaaaaaattacctaccataccaccccactccctatgtagacttacaaacccaataatatagactctaataatctacacaagaaacaactaaccgtttattctactacagattataacaatttagtttatattaatctgactcaataatctagattataataatcttaaactgaaagaaacagagccttagttaacatgtaccacccgattagaatccatctccgtcgtcagtcaccaatggcggttgtttttgtagggatcagtgtgaacgcgacgtacgggacgttcatccgagcgatcaaggaggacatcttcttgaagtggaacgggagtaactacctcggtgtggtgtggccggggaacgtctccttcccggacttcctcaacccgcgcgccgccgagttctgggcgcgcgagatcgccgcgttccggcggaccctccccgtcgacgggctgtggatcgacatgaacgagatctccaacttcgtcgacccgccgccgctcaacgcgctcgacgacccgccgtaccgcatcgacaactccggcgtgcgccgccccatcaacaacaagacggtgccggcctccgccgtgcactacggcggcgtggccgagtacgacgcgcacaacctcttcggcttcctcgaggcgcgggccacgcacgacgcgctgctccgtgacaccggccgccgcccgttcgtgctcagccgctccacgttcgtcggctccggcaggtacaccgcgcactggaccggcgacaacttcgcgacgtgggacgacctccgctactccatcaacactatgcttagcttcggcctcttcggcatccccatgatcggtgccgacatctgcggcttcggcggaaacaccaccgaggagctctgcagccgatggattcaggtaacagaacacgtcgagctctcatgtcctccattaatggcgtaagtaagtttgagcttggtttgtgtgtttgaagcttggcgcgttctacccgttctcgagggaccactcggcgatcggcaccgtccggcgagagctgtacctgtgggaatcggtggcgaggtcggcgaggaaggcgctcggcctgcgctaccggctgctcccctacttgtacacgctcatgtacgaggcgcacaccacgggcgcgcccatcgcgcggccgctcttcttctcctaccccggcgacgtcgcgacgtacggcatcgacaggcagttcctgctcggccgcggcgtgctcgtgtcaccggtgctcgagccgggcgcgaccaccgtcaccgcctacttcccggcgggacggtggttcagcctctacgacttctccctcgccgtcgccacgaagaccggcaagcgcgtgacgctgcccgcgccggcggacacggtgaacgtgcacgtcgccggcgggaacatcctgacgctgcagcagcccgcgctgacgtcgtcgcgcgtgcgccagagcgtggtccacctcctggtcgccctcgccgaggacggcacggccaccggggatctcttcttggacgacggcgagtcgccggagatggtcggggcgcggagcaggtggagccagatcaaattcagcggcgcgaccgagagcggcggcagcgtcgtcagagtgaggtcgcacgtggtgcacgactcgtacgcgccgagccggacgatggtcatcgccaaggtggtgctcatggggcttcgatcgccggtgccgcccaaggggttcgccgtttatgccaacggcgtccaggtgaacgcgagcacggcggtcgacggcggcggcggcgggaacccggagaagggagcgctgggcgtggcgcacgtcggcgggctgtcgctggtcgtcgggcaggagttcgatctcaaggtcgttatgacctattaattaagccaaatagaattcgagcatcatctgaaacaaaaacccgacgaaattgagctgaataaattggcctaaatttgaattgtct</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0676700, RefSeq:Os06g0676700