Os06g0683300

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Revision as of 09:31, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0683300| Description = Similar to Beta-glucosidase| Version = NM_001064923.1 GI:115469577 GeneID:4341870| Length = 5515 bp| Definition = O...")
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Gene Name

Os06g0683300

Description

Similar to Beta-glucosidase

Version

NM_001064923.1 GI:115469577 GeneID:4341870

Length

5515 bp

Definition

Oryza sativa Japonica Group Os06g0683300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:29352576..29358090

Sequence Coding Region

29354110..29354150,29354272..29354353,29354440..29354506,29354594..29354652,29355346..29355421
,29355503..29355574,29355678..29355765,29355885..29356140,29356238..29356353
,29356446..29356501,29356599..29356630

Expression

GEO Profiles:Os06g0683300

Genome Context

<gbrowseImage1> name=NC_008399:29352576..29358090 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:29352576..29358090 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tcagccttcagttgcttcccacaccccaccaactcaacaagcttttctgcctgtgttgaagctataagcagagcagacttccctcccggttttatctttggcacagcttcttcagcttaccagtatgaaggtgccgtgaatgagggccaacgtggacctaccatatgggatactctcacgaaaagaccaggtcgggtgattgatttcagcaatgcagatgttgctgttgatcactaccatcgctacaaggaagatgtggagttaatgaatgacatcggcatggatgcataccgcttctctatctcatggtcacggatctttccaaatggaacaggtgaacctaatgaagaaggattgagttactataacagcctcatagatgccctgttagataaaggcatagaaccatatgtaactctcttccactgggaccttccccaagcactcgaagacagatacggaggctggttgaactcagaaatcatcgaggattttgttcagtacgcgtttacttgcttcaaggaatttggagatagagtgaagcactggatcacttttaatgagccttacaactttgcgattgacggctatgaccttggcatccaagcacctgggagatgttctattctgtcacatgtgttctgtagagagggtaaatcatcaactgaaccatatattgtagctcacaacatacttttagctcatgctggtgcttttcgtgcttatgaacaacatttcaagaatgaacaaggaggcctcattgggattgcgcttaattctagatggtatgaaccgttctcaaatgccgatgaagacacagaagcagcagcgcgagcaatggactttgagcttggatggttcttggatcccttaatgttcggccactatcctccttctatgcagaaacttgcagaaacgatagattgcggatcaggaaacttgtaa</cdnaseq>

Protein Sequence

<aaseq>SAFSCFPHPTNSTSFSACVEAISRADFPPGFIFGTASSAYQYEG AVNEGQRGPTIWDTLTKRPGRVIDFSNADVAVDHYHRYKEDVELMNDIGMDAYRFSIS WSRIFPNGTGEPNEEGLSYYNSLIDALLDKGIEPYVTLFHWDLPQALEDRYGGWLNSE IIEDFVQYAFTCFKEFGDRVKHWITFNEPYNFAIDGYDLGIQAPGRCSILSHVFCREG KSSTEPYIVAHNILLAHAGAFRAYEQHFKNEQGGLIGIALNSRWYEPFSNADEDTEAA ARAMDFELGWFLDPLMFGHYPPSMQKLAETIDCGSGNL</aaseq>

Gene Sequence

<dnaseqindica>1535..1575#1697..1778#1865..1931#2019..2077#2771..2846#2928..2999#3103..3190#3310..3565#3663..3778#3871..3926#4024..4055#acacgcatcatcaccacgccacgcgccgcgagatgctgcttcggcgggggcgcccaggcgtggcgcctcccggattccggcggcttcgacgtcgccggcgacgcgcgcaagccaagcgacagttgcggaggcaagcaaccccccaagttccgtcccttttgcgcttttctgggacccatttcctctctcttttggggggcgctttcgcggtgacgacgctgccgatgcgcgtacgcctgaggagttcttccccatcacgccgcgtgggggatcgggacgtcgccatttccgctgccgttttcttctctttggggggttgcaatctcgcgtttcatttgatagggttgggcgtgggcggtggggaatggggatgggtaggtagatggcaccgatgtgaatcggacgacttcgaatcgaagccttccgatccatgtgaggaggttgaggaaccaacctaatttcgaatcgaagaactcttggtttctctacctaaaaccaaatagcatagtgacagtggtcgttatactatgaattccaagctttttgaccgaagatttcgaatcatcgagcatctttggccaagctattctaacacggttgactcagaagtctacgtttctatgcattgtgtatttgagtgttagttactatatttcgtgataaacaaaactgttgactcaaaagtctacgtttatatgcattgtgtatttgtgtgttactgtatttagtgataaaccttaggtgtacatgtgagggatttcatggataacacgtgcactacattcttgcctgttccactggtcaccatcagcaaatcgctcctgtccctttcgtgtggctatcactggagctattcaattcttgaaaggctctgccgtgcaagcaaaccgttttctttccaatgggataagtgtgtgactgtgctataatctcaggataaattcatcactaaatcgttgctatcagttttggtttatccactcattaaatcaatgcaacaaatgtggtgatcaataattagtagtacttgtttgttggtatgccgtgctgccaaactagttggataacaaagattcctattatattggggttaaccactgtattttcctaatcataattttttaggctccttattgtcattatcacttagcatcattgcataagagaaaaaaaaggggggtcaatactgcaggatggtattttaggaaggaaatgtgttatcgtgatattaacacagcctttcttccatgttgcttgcactcctctcaaactggtgtagcttcctaaagactggctcagttacacaatttttattcttaaatgctggaatcctgggaaatccttaatgcgcctggaattgttgcactcaagtaaagctttagtttgctacacccgtgacactttcagagttggacatgtcaaagtttccttccctttttgataaaatgtccagtgtgatagagatattgcaacctgtcacctccacaagagctacttagcagagacgcgcgttggattccaagacaagtgatgatcagccttcagttgcttcccacaccccaccaactcaacaaggtttatatatatcttacaatcctgtctgctacttatctatagactgtggacattagtagttagtgctacctactgaagggaaggccatgagtctcttaacacttgttcatatccttgtcagcttttctgcctgtgttgaagctataagcagagcagacttccctcccggttttatctttggcacagcttcttcagcttaccaggtctagtgttaccaaaagatctctaatttcacttgagttcttttagatggatgtctgatggatatttctggtcaatatattaccagtatgaaggtgccgtgaatgagggccaacgtggacctaccatatgggatactctcacgaaaagaccaggttcagtaatggggatttatttgtagaagtactctaatctgaggtgcaaactatgactgcaatatgagcaatgtaatctttcttcaggtcgggtgattgatttcagcaatgcagatgttgctgttgatcactaccatcgctacaaggtgagttatccataattcatgaattcctgtacctcctttatgttatttacttcatttgttcctgatatgtaatctgggacatgaagtttaccttttggctaattatgttgggattaaaaatgtgaactttgccttgaccaattacgttgttcttttaaatttgaattatagttttacggatgatctgatggaacctgaattgattatttttcaaagaaatctgaactggtcatttaaccaggaatgtgcaaatccaggcatcctggaagttaggtcaaatgtttgccaacctttgcttcaacaatttctagtaatttatgaaaactaattgcttgcgcacttttgtatctccaagcatcaatgtctgacgtattatattgttaggaaattatcccagtgcaagttttgtctgggccatttacagtttaaatgtgtagagactgtaggcatgctaaactgctaatttacgaattactagtatactaattgtgcaaatccacttctctagcatgctgcttccaaaactaagataacaggaagaccatttctgatgtttttccaaatacaagatgccattttggagcatcaagaaggctttctggatagagcatgtcttatttgttcagtcgattctatttctttgattgagcttgtaatgaaataaggacatcaactaaatggataaactggcaggaagatgtggagttaatgaatgacatcggcatggatgcataccgcttctctatctcatggtcacggatctttccaagtatgaattatgtaaattatgtgcaaaatctatctttttttttttgttattgttcactaataccaccatgcatcttgccagatggaacaggtgaacctaatgaagaaggattgagttactataacagcctcatagatgccctgttagataaaggtctagtgtattctattgtttggtgtctgcataatgcaaactgtttccaacagccattaatatgaactttttttctttggtgttctctatatttgtggatcaggcatagaaccatatgtaactctcttccactgggaccttccccaagcactcgaagacagatacggaggctggttgaactcagaaatcatgtatggaagactatcacatcatcttcctttagctgagataatcagttaaacggttaggtagcatcaaaatttctctttctattcttttttgtagtgattatgacatcttaattgtgcagcgaggattttgttcagtacgcgtttacttgcttcaaggaatttggagatagagtgaagcactggatcacttttaatgagccttacaactttgcgattgacggctatgaccttggcatccaagcacctgggagatgttctattctgtcacatgtgttctgtagagagggtaaatcatcaactgaaccatatattgtagctcacaacatacttttagctcatgctggtgcttttcgtgcttatgaacaacatttcaaggtgatccatgtgactaaattttctagtaatgttttttttcttaaaaatagaagcaattaagacaatagtatgcatgcattttttgtatgaattgcagaatgaacaaggaggcctcattgggattgcgcttaattctagatggtatgaaccgttctcaaatgccgatgaagacacagaagcagcagcgcgagcaatggactttgagcttggatggtgatacatcaattaatttaaattcctatataattacactaaatagcaactggacgtatattaattatgacatttttctagtgtgaatacaggttcttggatcccttaatgttcggccactatcctccttctatgcagaaacttgcaggtgataggctgcctcagttttcaactcacgcatcaaagttggtatctggatcactagattttgttggcataaaccactacactacactatatgctagaaacgatagattgcggatcaggaaacttgtaatggatgatgcttcaaccgattctgctgtcataccaactggtcagtcttgataaataaagagattctaaatttcctggtctgttttcagtattactgacttctctgcatgcactatggcagcttatagacatgggaagaaaataggagaaacggtacaatttgcaaagccattcttgccgttgctaagacttgttatacttatacctatcctttcatttatgctatttctagtcaaatgattggttgaaactaaaatttgtattgatcaactttcaggcagcatcaagttggctgcacatagttccatggggtatgttcaagctgatgaaacatgtgaaagaaaagtatggaaacccgcccgtagtcattactgaaaatggtatgttggctggagattattgacagtagataagaattctttccttaaaaagcatataataatagttaacaaagggagctgtttatggcaggtatggatgatgccaaccacccattttctagattagaagacgtcctacaagatgataaaaggatacagtaccacaatgattatatgtctaatctcctggatgctataaggtgaagtttcacttctgtgtacatacattggaacatataaaatcatcagcagttctcttctttcgagaggggaagccaaaagcttactttccatcataggggagctataattggcacatagatacagcgtaagggaacgaaggcagtaggttcacaactcttgttgttcttgagtgcaagctagcttatcgcaccaatgggcatccatatgtgcaaagcagatacaataaatctggtaaaacatacacatagctctctagttcctgagataaccgcaggaacggcactgtccacataatctgcatctgccttctaccaaagcttcaccgaattgttgcattcagacccccagaatgacacgggagaagctagttacacaccatcatgattgcatacatagctacagttagcatgactgcatcaatcttctgttgacagttatgaccatatgtttcacggctacttaagaactctccgacttgaattactgcaggaaagaaggttgcaacgtccatggttactttgtatggtccctgctcgataactgggaatggaactcaggctacacggtgcgattcggtctctactacattgactacaagaacaacctgacgaggatacccaaagcatcagtccaatggttcagtcaggttttagcccagaaaacagctatcatataggtagagcacaatggttcaggattcaggaatgaccatgaagtgtacattattaccaccctttgcataaagctacatacattaggagttgaagtaaaaatgtaaacataagattatctgatatgaccgtcaacgacgccgttgactgccgttggtgtacgttcttgtcacagaattcaacaggaaagttgagcccatgttgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0683300, RefSeq:Os06g0683300