Os06g0693500

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Revision as of 09:32, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0693500| Description = Zinc finger, C2H2-type domain containing protein| Version = NM_001064970.1 GI:115469671 GeneID:4341920| Length = 321...")
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Gene Name

Os06g0693500

Description

Zinc finger, C2H2-type domain containing protein

Version

NM_001064970.1 GI:115469671 GeneID:4341920

Length

3218 bp

Definition

Oryza sativa Japonica Group Os06g0693500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:29831622..29834839

Sequence Coding Region

29831786..29831890,29832763..29833311,29833404..29833573,29834109..29834324,29834442..29834601

Expression

GEO Profiles:Os06g0693500

Genome Context

<gbrowseImage1> name=NC_008399:29831622..29834839 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:29831622..29834839 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgacggtgacctgcaacgcgtgcaacgcggggttcgatgacgaggagcagcagcgcctccactaccgctccgagtggcaccgctacaacctcaagcgcaaggtggctggagttcctggagtgactgaggctctgtttttggctagacaaactgctttagcagaggggagcaactctgatagcactccaatgctctacagttgtgctctttgtggaaaggagtacaggagctcaaaagctcatgcccaacatcttaattcacgatcacatctcatgaaagcttctcaggagcctaatgcatccattgctggaattaccatagtcaagcctcgtcctgagcgagttcaacgcagggctccatctgcagtagaagaggatgaagatgaagatgaggaggaagagtgggttgaagtggacccaagtgagttagagtcgacttcggaaatgcaagtagatgagcattcctccaaatcagatgatgagatagatgagtttgaagagttggatcccacattctgcttcatgtgtgatcttgagcatgacaccattgagaattgcatggtccacatgcacaaaaagcatgggtttttcatacctgatagcgaatacttgaaagatccaaatggtcttcttatatatgttggtctgaaggtgaagcgtgattttatatgcctatactgcaatgacagatgccagcctttccaaagtctagaggctgtgagaaagcatatggatgcaaaaggacactgcaaagtacgatatggagatggtggggatgatgaagatgctgaccttgaagatttctatgattacagcagcagttatgctgatgtggagggtaaggagttggttgctgcagatgacaaggataacattgaactgggaagtggtggggctgagcttgtaataacgaacaagagtgagaaaggaactcgtgtcagaactcttggttctcgggaatttattcgctactatcgccagaaaccacgtccttctgttgcaacagatcgtgctcttgcgctttctctggcttccagctacaagagcatgggtctggtgacagttcagtcaaaggagcaagttgtaaggctgaaagttctccgcgcaatgaacaagacaggtgtggagaccatgcgaaccaagattggaatgaagagcaacgtgatccgcaatctccccaagaactgcccatattag</cdnaseq>

Protein Sequence

<aaseq>MPTVTCNACNAGFDDEEQQRLHYRSEWHRYNLKRKVAGVPGVTE ALFLARQTALAEGSNSDSTPMLYSCALCGKEYRSSKAHAQHLNSRSHLMKASQEPNAS IAGITIVKPRPERVQRRAPSAVEEDEDEDEEEEWVEVDPSELESTSEMQVDEHSSKSD DEIDEFEELDPTFCFMCDLEHDTIENCMVHMHKKHGFFIPDSEYLKDPNGLLIYVGLK VKRDFICLYCNDRCQPFQSLEAVRKHMDAKGHCKVRYGDGGDDEDADLEDFYDYSSSY ADVEGKELVAADDKDNIELGSGGAELVITNKSEKGTRVRTLGSREFIRYYRQKPRPSV ATDRALALSLASSYKSMGLVTVQSKEQVVRLKVLRAMNKTGVETMRTKIGMKSNVIRN LPKNCPY</aaseq>

Gene Sequence

<dnaseqindica>165..269#1142..1690#1783..1952#2488..2703#2821..2980#cactcctcgatttttctcccgcaactcactgcgccgccgcggagaggcaaacccgaaggagactaggagaggaagagcttcaccgcctccgcctccggcaaggaaagccaaagccaatcgaggccaagagcgagggggaaggaagaagaggggggaagggagagatgccgacggtgacctgcaacgcgtgcaacgcggggttcgatgacgaggagcagcagcgcctccactaccgctccgagtggcaccgctacaacctcaagcgcaaggtactatcgtttaccttccaccgtggggtggcctggccgccttcctatctgtatcgacctctcggggttttaggtcgattagggagcgtgttttgtttttagggttttttttttccgttcatgtaggagatgattcgttctttagttaggcactttggtgtgttgcgcgtatatggaccgaatttgaaactttgagtgtaggaaaagcccatgcgaactcttcagtgatggaattttgctcttgttttgaagtcgcctgttaaaagtttggaaatttggaaatagtttgtttttccacctgaaattggtcagtcctggattttggagaatttcaggatgaatattttcctatggctattaaggcaatattagtggtaaaattatggtggccgaaatttgaactggaggctctaatgctttgattaactcgagaggagagctttctatatgtgttacacttacacgagcatctctgttggcctcttggcgctggcagagatttcattgagtggctgtggtttggtgaatttgttcatgcatgagatgccctttaaaaaagcattgtcgtgttcccagtagaaatatcccgcatgttgttacaaaaacctatatgggatagttgatgtagatttacatcttttgttttagacaaactattttactcattatgattatccttgcaaagcatgcttcctgttgggtaaattcttagggagcaacatagatgcaagtcgatgtgtgacattatgttgtagaagcatacttgctagaaatttgtctatcttgagcattatgattggaaaacatgcttctagagaattattaattgaacttctgtgagactaagaccgagacatttatttctgtgtcaggtggctggagttcctggagtgactgaggctctgtttttggctagacaaactgctttagcagaggggagcaactctgatagcactccaatgctctacagttgtgctctttgtggaaaggagtacaggagctcaaaagctcatgcccaacatcttaattcacgatcacatctcatgaaagcttctcaggagcctaatgcatccattgctggaattaccatagtcaagcctcgtcctgagcgagttcaacgcagggctccatctgcagtagaagaggatgaagatgaagatgaggaggaagagtgggttgaagtggacccaagtgagttagagtcgacttcggaaatgcaagtagatgagcattcctccaaatcagatgatgagatagatgagtttgaagagttggatcccacattctgcttcatgtgtgatcttgagcatgacaccattgagaattgcatggtccacatgcacaaaaagcatgggtttttcatacctgatagcgaatacttgaaagatccaaatggtcttcttatatatgttggtctgaaggtaggcattgttcatttgtgtaaagtcttctcttttacttttcttgggtactataatcttaatcataaggttgctttgattatcgtatgcaggtgaagcgtgattttatatgcctatactgcaatgacagatgccagcctttccaaagtctagaggctgtgagaaagcatatggatgcaaaaggacactgcaaagtacgatatggagatggtggggatgatgaagatgctgaccttgaagatttctatgattacagcagcaggtttctattaagagtttcctcttacaatagttcaatattgcttgttttcattattatgtttgaatgttgagttaaacataaatgaattgcactgtgggtttcgggtaccttggtttactcactaacattttgtgtgccatgctactgtttgacatgttttacaaataatagagaccccgagcatctgctgttgatgactgaatagtttttgctattgtctgttgagttttgacccttatgttccatgactgaattatattctcagactggtagtgagacttttataatagaacaatcctagcactatagatttaattgaaaaatcatgtggtagatcaaaattcttcctccataagggatgatatagatagtgggtatactagttcttcctccgttatgtatcataatcatgttgaacagagccctagttgtaggtactatggttagcactggagatcaaaatttctttatttggttgaatgcatggaatcattgtagatctaacggccaatggtctctgatattctcgttgcagttatgctgatgtggagggtaaggagttggttgctgcagatgacaaggataacattgaactgggaagtggtggggctgagcttgtaataacgaacaagagtgagaaaggaactcgtgtcagaactcttggttctcgggaatttattcgctactatcgccagaaaccacgtccttctgttgcaacagatcgtgctcttgcgctttctctggcttccaggtctgaacctattgtccacttttcctccatttggttatctgccatgttacatcaataaaatcttagcaactccttagtttgatgctgttattcacgatttctgcttctcctcatcagctacaagagcatgggtctggtgacagttcagtcaaaggagcaagttgtaaggctgaaagttctccgcgcaatgaacaagacaggtgtggagaccatgcgaaccaagattggaatgaagagcaacgtgatccgcaatctccccaagaactgcccatattagtcgatgccacctgttgcaggatcaaagcccttggagctccagcatcatctttgtggcaatggctgttttttgtgcatctgctagccatggcagagagcttgtgatattcgcaaaaacaatagatctttatattgtttaatttgcacctcaaatgagagtatcatgcttactggaaacaagactgtatccggtataagagttatgacttcggtaaacacatcaccttctgtgattttga</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0693500, RefSeq:Os06g0693500