Os06g0694000

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Revision as of 09:32, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0694000| Description = Similar to FKF1 (Adagio 3)| Version = NM_001064973.1 GI:115469677 GeneID:4341923| Length = 4997 bp| Definition = Or...")
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Gene Name

Os06g0694000

Description

Similar to FKF1 (Adagio 3)

Version

NM_001064973.1 GI:115469677 GeneID:4341923

Length

4997 bp

Definition

Oryza sativa Japonica Group Os06g0694000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:29846547..29851543

Sequence Coding Region

29847020..29848628,29851066..29851349

Expression

GEO Profiles:Os06g0694000

Genome Context

<gbrowseImage1> name=NC_008399:29846547..29851543 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:29846547..29851543 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagtgggacagcgagtcggacggcgccggcagcatcggcgccggcgaggaggaggaggaggaggaagaggaggaggagggtggttttgggggaggaggtggtggtgggggcggcggcggagggatgttctcgttcgcgattgaagggatgctgcgcgcttcggggccgtgcgggctcgtcgtcaccgacgcgctcgagcccgactgccccatcatctacgtcaactgcgggttcgaggaggccacgggataccgcgcggaggaggtgctcggcaggaactgccgattcctgcaatgcagaggaccctttgcgcaaaggagacatcccctagttgatgccatggtggtttctgagattcgcaaatgcatagacaatggtaccgaattccgtggtgatttgctaaatttcaggaaagatggctctccattgatgaacaagttacacctgacccctatatatggagatgatgagaccataactcattacatgggcattcagttcttcaccaatgctaatgttgatttgggaccattgcctggctcattgacgaaggaacctgtcagatctacaagatttactccagataactttttccggcccatatccactggaccagggcagagcaacttctgccgggaatattctagcctgttccagttgactgatgaagtactctgccagagtatcctgtcaaggttgtcaccaagagatatagcatctgttagctctgtgtgtaggcggttgtatctcttgacaagaaatgaagatctttggagaatggtttgtcagaatgcatggggcagtgagactactcgagctcttgagactgtccctgcggcaaaaagattaggctggggtcgattggcaagagagctgaccacactggaagctgttgcttggaggaagttgacagttgggggtgccgtggagccatctcgatgtaacttcagtgcctgtgctgtagggaatcgtgttgttctctttggtggggaaggtgttaacatgcaaccaatgaatgacacatttgtgttggatttgaatgctagcaatccagaatggaggcatgtcaatgtaagctcagctcctcctggccgttggggccataccctatcatgcctaaatggatcgctgttagttgtgtttggtggatgtggaagacagggcctgcttaatgacgtgttcacattggatttggatgcaaaacagccgacctggcgcgagattcctggagttgcaccaccagttccacgttcatggcacagctcctgcactttagatgggacgaagttggtggtttctggtggctgtgcagactcaggtgtactactcagtgatacatatcttcttgatgtaacgatggacaaacctgtgtggagggaggtacctgcatcttggacgccaccttcgagattgggccactcaatgtctgtctatggtggcaggaaaattttgatgtttggtggtcttgctaagagtggtccactgcgactccggtcaagtgatgtgttcacaatggacttaagtgaagaggaaccctgctggcggtgcctcaccggtagtggaatgcctggggcaggaaatccagccggagctggtccacctcctcgccttgatcatgttgctgtcagcttacctggggggagagttttgatatttggtggatcagtggcaggtcttcattcagcgtcacagctttatctcttggatccaactgaagaaaagcctacctggaggatactgaatgttcctgggcgacccccacggtttgcctggggccacagcacctgtgttgttggaggaacaaaagcaatagtgcttggaggacaaactggagaagagtggatgttaaccgaaatccatgagctttctttggctagcagcacagtttga</cdnaseq>

Protein Sequence

<aaseq>MEWDSESDGAGSIGAGEEEEEEEEEEEGGFGGGGGGGGGGGGMF SFAIEGMLRASGPCGLVVTDALEPDCPIIYVNCGFEEATGYRAEEVLGRNCRFLQCRG PFAQRRHPLVDAMVVSEIRKCIDNGTEFRGDLLNFRKDGSPLMNKLHLTPIYGDDETI THYMGIQFFTNANVDLGPLPGSLTKEPVRSTRFTPDNFFRPISTGPGQSNFCREYSSL FQLTDEVLCQSILSRLSPRDIASVSSVCRRLYLLTRNEDLWRMVCQNAWGSETTRALE TVPAAKRLGWGRLARELTTLEAVAWRKLTVGGAVEPSRCNFSACAVGNRVVLFGGEGV NMQPMNDTFVLDLNASNPEWRHVNVSSAPPGRWGHTLSCLNGSLLVVFGGCGRQGLLN DVFTLDLDAKQPTWREIPGVAPPVPRSWHSSCTLDGTKLVVSGGCADSGVLLSDTYLL DVTMDKPVWREVPASWTPPSRLGHSMSVYGGRKILMFGGLAKSGPLRLRSSDVFTMDL SEEEPCWRCLTGSGMPGAGNPAGAGPPPRLDHVAVSLPGGRVLIFGGSVAGLHSASQL YLLDPTEEKPTWRILNVPGRPPRFAWGHSTCVVGGTKAIVLGGQTGEEWMLTEIHELS LASSTV</aaseq>

Gene Sequence

<dnaseqindica>2916..4524#195..478#tttccgcctcctctcgaaacctcctcctcctcttctcctcttctctcatccaatcgcgagccaccaaaccctaatccccaacacgcacacgcacacgcacacgcgcgcggtcgcgcagcagcgcgccatgggatgagccgcggcggcgcgggagctcggatccggagctagggtttcgggccgcgagtttgcccatggagtgggacagcgagtcggacggcgccggcagcatcggcgccggcgaggaggaggaggaggaggaagaggaggaggagggtggttttgggggaggaggtggtggtgggggcggcggcggagggatgttctcgttcgcgattgaagggatgctgcgcgcttcggggccgtgcgggctcgtcgtcaccgacgcgctcgagcccgactgccccatcatctacgtcaactgcgggttcgaggaggccacgggataccgcgcggaggaggtgctcggcaggaactggttggttcatatcaatctcgcatatgtctcagttattggttcgacttgtttgatttgggcgttcgaattggtggcacttaggatcgaatataatttgcattttatatgatttaatcacgccgtgagcatgatcttttgaattaaatgacaaacggtgcagccctttcgtcatttttagtattcccagcgattacttgtgtccattttgtctataaaaaaaataagaactagtatgttttttttttcactagtatagcttacggatagctgatggcactaatggaccagataaaatagaaattagcacttagcaccatagggtatcatgacctgttgcatcctgatctgggtgaagtttggcttaggatcgattgactttgtagattagacttagtgaactgcatcttgaggcaatactagttttaagaacatgatgcttgatttgtgttgcttggctcagaaattttctttctaatgctaccagtaaatatgacttaattttgttgctagtttcttttatctgactctaggcttgtttaatagcatgctatattttgtgttcaccaacacgctaactgctagacctttgtttcaagaaaagaaataaagaggaaaaaacactaagagcattttaggctgcaaacatgtgcctagttagtgattaggtggtctgaggcagtataaattggctgggtggccctagggaggagggtgcttcttagcacataggtaggctagtcaggcaatttttagaacattgattatgttgttatatccttaaggaagaatagctattgcttgttggtagttggaacttatgctacttataccataaaatgaaaataaattattcaatggaatgatctctatgtaaagaaaatgatggaactgattcagttaacgaagtatctgaaataagacttccctaaaggttgtgaaaagttattttgagattgttagcctgaactgaatgaaaggaggtccataggtctaacacattaacacaaggtagaacaaagaaaagtattaaatggaaatggatattgtggccccaattcctggcttccccttggtcccccatctttgttagcgatcaaaccccaaaaaataggatatccgtggacataggaaatgataaaaccgtgacatgttataatatattgcagcaatgttctttttgcctttttggtcaacaccttggatcttgaagttcatataccagaaacctctaagcttttcccccctgatattacctccaaggagagaggattttttccatgcatatctaaatgctatattaaaaaataagtctactttgatctatggttcttactagaacatgttaatatcaaatttcaactataggtttgattgataagatacataggaaagcaaatcaagtgggtactactttatgtgatggaacaaatataccactgcaacaattgtttgtctaagtttacaaagattgatcatgtaagcgtgtgtagtttttgcatattttgattatctgttgtttttcatcttcactaactttctagtggagtcgaagtgctgtgaagttattttgttattaggcacatggtttgacaacatgcttgtgccaaaaaaaaaatctcccttttttgaagagtattattcagatacctcaccaggattaacttgcttggttcactttacacgtttagggatcaaaatgcaactcccaaggtcaaggagccatgtgatacacccatgcaagtctaggggactactggcctatgatgcacttctattaatcatttatcttatcctacattcgtggtagcagtttagcacttacctctccactattactatcacaattattcaatacaagtatacaacacactggctaaacatttagcatcaagtatcagttgggatgaagtttatggtgtgaagtcaaattcagatgtggttattagccatccaactcatgcacatgttctttcttattaattcagaaacctgcccaagatatttttactctacgccctatgaatatgagtgaaaattttcacattgttcgcatatgaagggtcaaatttttggtggcatcagaaaaaagttttggaaagaacatattctgttgctgaatttttctacatcgttgttcacatcaaaaagatcatgaaaactgagctaacacagcatctagtaccaatgtgcttttgtgagaagggagactgagtggtgcttacaacactttgaatttcctcggagacttgtgctcaaaagtagttggaaatggcactcgccaactgaaagtagcataggatttttgcaagtgtggttcacatttttttcactcatatttcttaaattgttctatgtgttttacttagtacacacttacttgttctttatgtacttttcttgacattcttacacactgatgtttctttcccactttcagccgattcctgcaatgcagaggaccctttgcgcaaaggagacatcccctagttgatgccatggtggtttctgagattcgcaaatgcatagacaatggtaccgaattccgtggtgatttgctaaatttcaggaaagatggctctccattgatgaacaagttacacctgacccctatatatggagatgatgagaccataactcattacatgggcattcagttcttcaccaatgctaatgttgatttgggaccattgcctggctcattgacgaaggaacctgtcagatctacaagatttactccagataactttttccggcccatatccactggaccagggcagagcaacttctgccgggaatattctagcctgttccagttgactgatgaagtactctgccagagtatcctgtcaaggttgtcaccaagagatatagcatctgttagctctgtgtgtaggcggttgtatctcttgacaagaaatgaagatctttggagaatggtttgtcagaatgcatggggcagtgagactactcgagctcttgagactgtccctgcggcaaaaagattaggctggggtcgattggcaagagagctgaccacactggaagctgttgcttggaggaagttgacagttgggggtgccgtggagccatctcgatgtaacttcagtgcctgtgctgtagggaatcgtgttgttctctttggtggggaaggtgttaacatgcaaccaatgaatgacacatttgtgttggatttgaatgctagcaatccagaatggaggcatgtcaatgtaagctcagctcctcctggccgttggggccataccctatcatgcctaaatggatcgctgttagttgtgtttggtggatgtggaagacagggcctgcttaatgacgtgttcacattggatttggatgcaaaacagccgacctggcgcgagattcctggagttgcaccaccagttccacgttcatggcacagctcctgcactttagatgggacgaagttggtggtttctggtggctgtgcagactcaggtgtactactcagtgatacatatcttcttgatgtaacgatggacaaacctgtgtggagggaggtacctgcatcttggacgccaccttcgagattgggccactcaatgtctgtctatggtggcaggaaaattttgatgtttggtggtcttgctaagagtggtccactgcgactccggtcaagtgatgtgttcacaatggacttaagtgaagaggaaccctgctggcggtgcctcaccggtagtggaatgcctggggcaggaaatccagccggagctggtccacctcctcgccttgatcatgttgctgtcagcttacctggggggagagttttgatatttggtggatcagtggcaggtcttcattcagcgtcacagctttatctcttggatccaactgaagaaaagcctacctggaggatactgaatgttcctgggcgacccccacggtttgcctggggccacagcacctgtgttgttggaggaacaaaagcaatagtgcttggaggacaaactggagaagagtggatgttaaccgaaatccatgagctttctttggctagcagcacagtttgaggttcgaagtttattttttatgtttcagcgagcttccttcagaacaatcatgattattcatgtgtggcctgaaacttttcttcactggcaggactggaacactggatgagtatactgaatcttttggcaacgacttgtatttacttggaagaggtggtttgccttgagtagatcaaaacctacatttggggttgcttgctttatgtagtcaaggtgtagtgatatgttctttttcttgttgtttgttttgtcttttaccagaaaatataattcataagctactcttgtgaaatgagtaccaattttatgtattctcagacgcttctgacatgcattatgttagggaaaacagaacaacgttgtatagctgaatcatttgtgatgtactatgcttcttgagcatcttgctgccatctctggcctctgggacacaatttgacgcttatgtgatgtatgcgagaaaaattttgatc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0694000, RefSeq:Os06g0694000