Os06g0708100

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Revision as of 09:34, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0708100| Description = Carboxylesterase, type B family protein| Version = NM_001065066.1 GI:115469863 GeneID:4342018| Length = 5052 bp| De...")
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Gene Name

Os06g0708100

Description

Carboxylesterase, type B family protein

Version

NM_001065066.1 GI:115469863 GeneID:4342018

Length

5052 bp

Definition

Oryza sativa Japonica Group Os06g0708100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:30832728..30837779

Sequence Coding Region

30833276..30833437,30833896..30833986,30834702..30834845,30834997..30835062,30835492..30835632
,30835980..30836081,30836167..30836241,30836372..30836452,30836573..30836642
,30836966..30837042,30837295..30837563

Expression

GEO Profiles:Os06g0708100

Genome Context

<gbrowseImage1> name=NC_008399:30832728..30837779 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:30832728..30837779 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaggtggagctcgctgaccgcgcggcagcccggcccagcgagacgggggaggctccgccgtcatctccagccgccgccgccgctgcatcagcagcagcggaggacgcgccgctcttgccaggtggaggtgggggtgtgcggcggcgggtggtggtgagcgagcggttccggcagcgcagcggatccttccggcgggaggtccgccgcgcggccgaggagacctacctactcacgcgcctcacgctcatcctcctccgctacctcgggataggctacagatggatcaggcagttcctagccctctgttgttacaccttcttgctcatgccaggtttcattcaagttgtatattattatttcttctcgagccaagtttgtagaagtgttgtatatggagaacaaccaagaaacaggctggatttatacatacctaccgatagaactgggttgaagccagttgtggcatttgtcacgggtggagcttggatcatagggtacaaagggtggggggcccttttgggcaggcgcttggcagagaggggcatcttagttgcatgcattgattacagaaactttcctcaagggactattggtgacatggtagaagatgcatctcaagggattgcctttgtctgcaataatatagctagttatggaggtgatcctgaaaggatttatcttgttggacaatctgctggtgctcatattgctgcttgtactctcttacaccaagctattaaagaatctggtgaaggagatgcttccacttggagcattgcacagctaaaagcttattttggtatttctggcggctataatcttcttaacttggtcgatcatttccataaacgtggcctgtaccgatcgatctttctcagcataatggaaggcgaggagtcgttgcaaaaattttctccactggtgatggttaaggacccagctgctaggtctgcagtatctctattacctcgaatattcctttttcatggaacaagtgactattcaataccatcggctgagagcgaggctttctttgatgctttacaacagaatggcgctaaagcagatctgttcttgtatgatggaaagacgcatactgacttgttccttcaggatcctctccggggtggtagggataagctgctcgaagagattgttactgtgatacacaatgacaatccagatacatctgcccagcatcttgctgtacctgttgcacgccgccttgttcctgaattcatgcttatgcttgctggaagagttagtcctttctga</cdnaseq>

Protein Sequence

<aaseq>MQVELADRAAARPSETGEAPPSSPAAAAAASAAAEDAPLLPGGG GGVRRRVVVSERFRQRSGSFRREVRRAAEETYLLTRLTLILLRYLGIGYRWIRQFLAL CCYTFLLMPGFIQVVYYYFFSSQVCRSVVYGEQPRNRLDLYIPTDRTGLKPVVAFVTG GAWIIGYKGWGALLGRRLAERGILVACIDYRNFPQGTIGDMVEDASQGIAFVCNNIAS YGGDPERIYLVGQSAGAHIAACTLLHQAIKESGEGDASTWSIAQLKAYFGISGGYNLL NLVDHFHKRGLYRSIFLSIMEGEESLQKFSPLVMVKDPAARSAVSLLPRIFLFHGTSD YSIPSAESEAFFDALQQNGAKADLFLYDGKTHTDLFLQDPLRGGRDKLLEEIVTVIHN DNPDTSAQHLAVPVARRLVPEFMLMLAGRVSPF</aaseq>

Gene Sequence

<dnaseqindica>4343..4504#3794..3884#2935..3078#2718..2783#2148..2288#1699..1800#1539..1613#1328..1408#1138..1207#738..814#217..485#cacctgtcagctcccccccctccctccagtgagaagatcttctcttcttcgccgtcgtccgccggagcgccgccgcagaacgaccgccatctctccccggcgacctcgccgttgcgtgagaggcggccgcgctacgtcttgcccggagcagggagcgctacgagtcacgacgacgtgggggaatatcgcacgtcgccggctggtttgtcagtcgcgatgcaggtggagctcgctgaccgcgcggcagcccggcccagcgagacgggggaggctccgccgtcatctccagccgccgccgccgctgcatcagcagcagcggaggacgcgccgctcttgccaggtggaggtgggggtgtgcggcggcgggtggtggtgagcgagcggttccggcagcgcagcggatccttccggcgggaggtccgccgcgcggccgaggagacctacctactcacgcgcctcacgctcatcctcctccgctacctcgggtactcgccaattccatttctgatagttctactctactacaaggctgctatcacttcaaccttgcgatctgtttgtgttaatgctgtaatttggggaaattgtatcatggcatgtttaccactgagctaaatgatcatttctaggctttctactaagatcagatgctaaactgcttttgtgattgtgcatgggagtatggccttttcgtgttttgttctttgcaataacctgtctctgtctgatttatgcaggataggctacagatggatcaggcagttcctagccctctgttgttacaccttcttgctcatgccaggtttcattcaaggttagccttgccattactcttttgttgagggagagaaagcatttgcacttgcttggcacatctccacatttttctttggttgattcaccatgtcttcataagtagtatttcagtaggattttgtgttatatacctgagatcacaattgtcccatccgctggtttgaaaccttaagactagcatgggttccatcccacatcctcttccttagttagtgctagagctcctagccagttttcaaaaggaaaaacaaatttcattaccacagaaagtgtttaacagaatggagatggccttgactcttttttttttctttaatacagttgtatattattatttcttctcgagccaagtttgtagaagtgttgtatatggagaacaaccaagaaacaggtacttcttgctatctttttcataatgctatgctcatatttgtattttaatttgtcttggtgtacttggcatagtctattatgctgttcatatattgaaccctgaaaattcgttatctaggctggatttatacatacctaccgatagaactgggttgaagccagttgtggcatttgtcacgggtggagcttggatcatagggtgagtaaaactgtacaagtatgtactatcctggtctccaactttctgtatttttactacctgaagttccagtaagatttagattgtgtgttgactctataatggcaaattatacatatcacatccacaggtacaaagggtggggggcccttttgggcaggcgcttggcagagaggggcatcttagttgcatgcattgattacaggtactcaaaataaattccaaatatgcatatagaagaatgagggttcataccattttcatggagcataccaattatttgtttgcagaaactttcctcaagggactattggtgacatggtagaagatgcatctcaagggattgcctttgtctgcaataatatagctagttatggaggtgatcctgaaaggttcataacttacaatgatatcaaactttcaaacttttctgttgcaattacaaaatggttcctaccaacgtatgcccttctcatgcgctgatgtgcacaaattgttactgtattaataattaggataccatcagtggaatgtgagttagattgcgtcagagacatatttcattttggctatttatatattctagggttctagtaataggcactgcatggtataaagatcttacatatggaacttctgaagcattatgaatacaagaaacaactcagcgttctgattttggtatggcatatattgaggcatcttgtccgtatctgctctatctaaatgatacttacaggatttatcttgttggacaatctgctggtgctcatattgctgcttgtactctcttacaccaagctattaaagaatctggtgaaggagatgcttccacttggagcattgcacagctaaaagcttattttggtatttctggcgggtaatatcctattctctttacacttacagtaggtgacatgcagcaaggcttgcattttttataatgtgtatgagaatgcgcatgtacacactactttcagttttcagttgtttgtatcgtcaaatatttgcaacagtgtgcagtggaatatatcatgtagtctgctgagcttctttgtgagcagagctgtaatatgctgctccagatttaagaaatgagaagttccctttttaagaagtgacgtggcaattgggctcactctataaatattattgatgattcatgttcagcctttgtaatttatggatcattttggtacctttgttgttaatatgagattatattacatttttagtagtttcattaatggttcacatatacaggaattctggtgtatcggacttgacagttgatttatgatttctacagctataatcttcttaacttggtcgatcatttccataaacgtggcctgtaccgatcgatctttctcaggtatatttttgtttacagctagttaaaagtagcatagtattgtattcatgtcctccacaacaactcccacataactattgaactatgtgagcatatcatgttgattatctttatatacactaaaactccacttcaacaatatgtttcacagcataatggaaggcgaggagtcgttgcaaaaattttctccactggtgatggttaaggacccagctgctaggtctgcagtatctctattacctcgaatattcctttttcatggaacaagtgactattcaataccatcggctgagaggtgggttcaactggaatggttgatcacatggtgcatgttttcttgtcgtattgattcgaaatcattagattggacaaaccaactatatacttattcagttgttttctcttccaggagatgaatgtctcaggttaagtgaaatgaaacttttctctcgaacaaagtgaaatgaaactcatttaaacctttttgacattattttataataagtatgccttatgataaagtttccacatgctgttactgaccaaacaaaatgagatgactaaaccaaactgagggacttgggtattctaaggacttttggattgtttatacttcatagtgccctgatcttgtctgcatccatttcaaatgaattttccatgttgtttggcatgctgaagaaaaacatagactagtcagaaattgtttcttcttgaatcttattgtagttttgcactagtcaagaagaagagataagtctagtgcaacatcatgtcgttgtgccatttcctgttggtgttgagtagttaacactagttaagaagaaacaagtgttattcttagggattctagtgctaccatctagctttcatttaggagatttagtcacttgtttatttttcctcctcaccagtaacttttgtagttgtgttatctgacgaaacttctatattatggatattgccatattggactatttctattgattgacttaattgaaaaaatgcagcgaggctttctttgatgctttacaacagaatggcgctaaagcagatctgttcttgtatgatggaaagacgcatactgacttgttccttcaggtaatctattgttacattagtggttattggatatgggttgctttgtttagacattttattctttttggcttttatggtacttttctttcttctagatataaaattattcattcttcgatgtaatgttgttcttctctatattgtgatttcaagatggtcatagtctttgatttaagaaccattatggtgggtagtataactaagtaccttcagccaatataaaggcgttatcggcttagtatacaatgtgattgtaatttgtttacaagagaaagggcctgaaggttcaacccttcaaagaattaactgtctcaactgatcatcatgtataaactgtattgcttgatgtttgttattgccccaacatgggtatcacgccctggtgtatttggcagtgtaatttgaatgcacaaagttcttacacttgatgctttttctctgattaatgtgtgctgtaggatcctctccggggtggtagggataagctgctcgaagagattgttactgtgatacacaatgacaatccagatacatctgcccagcatcttgctgtacctgttgcacgccgccttgttcctgaattcatgcttatgcttgctggaagagttagtcctttctgattatgttggcgaccagtgatggcagctatgtatatattcaatgcaaggattgagcccagagaaatctgctgctcccggattagctagcagctagtcagttagtgtagtgttccaattaagatgccaaatgtaccccttcgttgagtagctacccgccagtatgtacagatcttgcctcagacgtctgtcattgactcattgttgtattgtatcttaaggtctagctcattatgctttagtaacacataacttgatatcttatgaagctctgtttggacaagggtcaatctgaggagagagcttgttgtgaattggaagaatattgtgaagacaactgttctgaccgaagaaaatcgtcatgagatgtctcctgcctttctgtaattcagtagtcagtaaattcagctcccaatagagttgctcgcagtactggaatggaggggtgttctggaagacgtttcatctgcgcacttgaagatgtctgtgtgtcttgtaaaagagtgtgtggctcagttattgatcaattagacaagaaaacattgcatgcg</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0708100, RefSeq:Os06g0708100