Os06g0717600

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Revision as of 09:35, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0717600| Description = Zinc finger, RING-type domain containing protein| Version = NM_001065130.1 GI:115469991 GeneID:4342082| Length = 317...")
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Gene Name

Os06g0717600

Description

Zinc finger, RING-type domain containing protein

Version

NM_001065130.1 GI:115469991 GeneID:4342082

Length

3176 bp

Definition

Oryza sativa Japonica Group Os06g0717600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:31369971..31373146

Sequence Coding Region

31370212..31370353,31371276..31371454,31372042..31372125,31372241..31372411,31372649..31372771

Expression

GEO Profiles:Os06g0717600

Genome Context

<gbrowseImage1> name=NC_008399:31369971..31373146 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:31369971..31373146 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatccgtcgggcgccttcttccacgcggctccccggagcggctcgaatgtgtcgctggcgtcgctggcgaggacggccggagggaggaggatgatgcacagggtcttccgcggcgtcatcaccttcatcttcgccatagctggactgtttcttggagcggtgactggcgggctgatcgggctggccaccgagagcggcctcttccgcggcaccggcatcggcgccatcaccggcgccctcgtctccatcgaggtcgtcgactcctccatccgcgtctggcgatcccgccgatccgggatctccagcatctgctatgtgcttaatgtgatctacagcctcctgaccggcaggcttgtccgcgagaaggtcgatccggcggtgcagcgggtggtccggagccagatgaatgcagtggattcatcgcccttcagggagtcccctgacctgttcgagatcgagggcaccaacggcatgccacgggcatccatcgacaagctcccggaggtcaggatcactgaggagtacaggaggaacgccattggtgacctctcgggatgttcagtttgcctccaggatttccagacaggtgagaaggtgaggagcttgccggattgctggcacgtgttccatgtgccgtgcatcgacggctggttgatcaagcatggatcctgcccgttgtgccggaggaagctgtga</cdnaseq>

Protein Sequence

<aaseq>MDPSGAFFHAAPRSGSNVSLASLARTAGGRRMMHRVFRGVITFI FAIAGLFLGAVTGGLIGLATESGLFRGTGIGAITGALVSIEVVDSSIRVWRSRRSGIS SICYVLNVIYSLLTGRLVREKVDPAVQRVVRSQMNAVDSSPFRESPDLFEIEGTNGMP RASIDKLPEVRITEEYRRNAIGDLSGCSVCLQDFQTGEKVRSLPDCWHVFHVPCIDGW LIKHGSCPLCRRKL</aaseq>

Gene Sequence

<dnaseqindica>242..383#1306..1484#2072..2155#2271..2441#2679..2801#acttcaatttcttcctagctcagctttcccctcttctccttctcctcctactacccaatacgactactactagttttctttcttggccatcatcatttgttcctcatcttactctagcttctccattccaaaattcaccaccgccggcgccgccatctccattccaaaatttgctctgcgtcgagtcgtgtgatcgatcgatcgatcgaggtgtacgtgtgcgctgctggggaaaagggaaatggatccgtcgggcgccttcttccacgcggctccccggagcggctcgaatgtgtcgctggcgtcgctggcgaggacggccggagggaggaggatgatgcacagggtcttccgcggcgtcatcaccttcatcttcgccataggtcgctaattaatctctctcttgctattcaatttgcttcttctgaatcttctttccaatctcccttgtttgctttctgctgcctgctctgatagcctgatctacaccgtcttggtgtgggtctgtgtgatccagcttcatttctgcttaatttcatcttgtttatgtgtttcagtgtctcgcatgcatatatatatggcacgagctacttcagatatatattttcccctttttctttttcttgccctccttttcttgtcctgcttcatttccatttcttggtccaagaagaaaaattaagggggacattttttatgcatgtttcatcaccaatactcaactcattttcacattttcccttttcaattcccttctatgatgggttctctctttctttgtggatgaatctgtgtgaagagagaggacatgacatccatgcatcggctgatggagctcaagctgctcaatcagcgctttgtatcatcttggtgtatttgagtcttaataaagcttccattatcttaaaaaaatcagcactttgtatggatggattttacagtgctcaatcttcagagcactgtctgtatttcctttttcaaggcagcatatactgatacttgcttaattggttctcccaacgaaaatacagattttttttgtcggcactgttaatttgcatactgttttatttccttctgagcaagtgcaaagtaatagatactaatattgtttggtcatatacgtgcagaatgggttcttgcacagcttaaaaccacaacttcttttctctgaacaatgcttttcagagtgtgacatttgtctcgttttttttttgttcaatcttgaagcctgaatcttgaaccggaaagctgtggtggtagctatgaatgttaattaacatggatgtgtttgtgtgtgtgcagctggactgtttcttggagcggtgactggcgggctgatcgggctggccaccgagagcggcctcttccgcggcaccggcatcggcgccatcaccggcgccctcgtctccatcgaggtcgtcgactcctccatccgcgtctggcgatcccgccgatccgggatctccagcatctgctatgtggtaagaacgaacacacacatttcttcttcatcatgccgacaggtatagtagattagtagtagctttggagtaggagagcaacctcatagctgcacgcttgcttgcttgcttacctcaactactgaacttccttgtctgtaccagtcatcagtgtgtgttgcttaatttatttatatgaactagtacttgcttaattcatataacctgtttgtgtttattttaaaacaaagggtcaaagctaactgcctcttttatgagatgatacaacttgtcaaaccttgctgtcttgaaagttcagatgattatttcgtacaaaaaagaatagttcagatgatgttttccaaagcaatttgtgcattctttacaatctaattaacctgctcatgtattctcagtaccacttttaggggggggggggggggggaagctccctaggtagattgtgcaacaaatatctgcacaaacgggatctctgaacatctcttctgcttcatctgtcatatatacgtgctcacagccttacattttgctaatttttttttgttggcttgttaaacctaacacaaatctctctgcacaaaatgcagcttaatgtgatctacagcctcctgaccggcaggcttgtccgcgagaaggtcgatccggcggtgcagcgggtggtccggagccaggtcagtttggtcgtctcatgaatctgcccctgcatacatggttgcgtctgattcagaaatatgcagtagcagcttcagttacagatttgtctgacgagattgcctctgaattcagatgaatgcagtggattcatcgcccttcagggagtcccctgacctgttcgagatcgagggcaccaacggcatgccacgggcatccatcgacaagctcccggaggtcaggatcactgaggagtacaggaggaacgccattggtgacctctcgggatgttcagtttgcctccaggtctgaaacttttaccatttctcaaactcactgtacctaaattgaacatctctgcattattgcttgcacattaccttgcaaccaattgatgagagtacattgcatccatatttaatttatcactgtctcgtatcaaaaccgtgtgcttctcattgatgtgccagatctttgcatgaattctcactgattactgaatcctgtgaattctgaaacatttggctcctcttactactgcaggatttccagacaggtgagaaggtgaggagcttgccggattgctggcacgtgttccatgtgccgtgcatcgacggctggttgatcaagcatggatcctgcccgttgtgccggaggaagctgtgagatcgacgacgacgacggccatggtgatcactgctatagttgtagcagaaggaggaggaggctgctctgctttcttgctgtgtgctgcgatcgagttgtccatcagtgttgctgttcttagagaagaagactgacatctctctctctctctatatatatagaaaacccttaatctatagagcattttgtttctgcttatattgctacatgctctatctttttggttgaactatctacatatatatctatatttctatctactcactcctttctccttatgtaacatacctctcaaaactctgaactggcttgtgctgatcatctgatgtataatatataatatataaatatatatcgccccttggacaccatcgc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0717600, RefSeq:Os06g0717600