Os06g0718100

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Revision as of 09:35, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0718100| Description = Similar to Alpha-expansin precursor| Version = NM_001065134.1 GI:115469999 GeneID:4342086| Length = 1151 bp| Defini...")
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Gene Name

Os06g0718100

Description

Similar to Alpha-expansin precursor

Version

NM_001065134.1 GI:115469999 GeneID:4342086

Length

1151 bp

Definition

Oryza sativa Japonica Group Os06g0718100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:31397197..31398347

Sequence Coding Region

31397267..31397420,31397506..31398143

Expression

GEO Profiles:Os06g0718100

Genome Context

<gbrowseImage1> name=NC_008399:31397197..31398347 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:31397197..31398347 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcgccgtggccatgtgttcgccgtggtggcgttcgtcagctacgcgctgctcgccgccgcctcgacgacggtggaggcgttcgcggcgtcgggctggagcaagggcaccgccaccttctacggcggcagcgacgcctccggcaccatgggcggtgcgtgcgggtacggcaacctgtacacgcaagggtacgggacgcggacggcggcgctgagcacggcgctgttcgacgacggcgcgtcgtgcgggcagtgctacgcgctgacctgcgacgcgagggcggacccgcggtggtgccgcgcgggggcgtcggtgacggtgacggccaccaacttctgcccgcccaactacgcgctccccagcgacgacggcggctggtgcaacccgccgcggccgcacttcgacatggcgcagccggcgtgggagcggatcggcgtgtaccggggcggcatcgtgccggtggcgttccgccgcgtgccgtgccggaggcgcggcggcgtgcggttcacggtggccgggcgggactacttcgagctggtgctggtgacgaacgtggcggcggctgggtcggtgaggtcgatggaggtgaggggcagccgccgtggcgccgggtggatggccatgtcgcgcaactggggcgccaactggcagtcgctggcgtacctcgacgggcagggcctctcgttccgggtcaccgccaccgacggccagaccatcgtcttcgccggcgtcgtgccgccgtcgtggaggttcggccagacgttcgcgagcacccagcagttcatgtag</cdnaseq>

Protein Sequence

<aaseq>MARRGHVFAVVAFVSYALLAAASTTVEAFAASGWSKGTATFYGG SDASGTMGGACGYGNLYTQGYGTRTAALSTALFDDGASCGQCYALTCDARADPRWCRA GASVTVTATNFCPPNYALPSDDGGWCNPPRPHFDMAQPAWERIGVYRGGIVPVAFRRV PCRRRGGVRFTVAGRDYFELVLVTNVAAAGSVRSMEVRGSRRGAGWMAMSRNWGANWQ SLAYLDGQGLSFRVTATDGQTIVFAGVVPPSWRFGQTFASTQQFM</aaseq>

Gene Sequence

<dnaseqindica>71..224#310..947#caccatagtagctaagctagcacaggttgcaacgagcagagagctaggcgaaatcgatcggaattcggagatggcgcgccgtggccatgtgttcgccgtggtggcgttcgtcagctacgcgctgctcgccgccgcctcgacgacggtggaggcgttcgcggcgtcgggctggagcaagggcaccgccaccttctacggcggcagcgacgcctccggcaccatgggtacgtacctatgtgttcgtccgttgcgtcgcgtcgcgacgcgtgcttggactgactgacagagtgcggtgtgcgtgcattgcaggcggtgcgtgcgggtacggcaacctgtacacgcaagggtacgggacgcggacggcggcgctgagcacggcgctgttcgacgacggcgcgtcgtgcgggcagtgctacgcgctgacctgcgacgcgagggcggacccgcggtggtgccgcgcgggggcgtcggtgacggtgacggccaccaacttctgcccgcccaactacgcgctccccagcgacgacggcggctggtgcaacccgccgcggccgcacttcgacatggcgcagccggcgtgggagcggatcggcgtgtaccggggcggcatcgtgccggtggcgttccgccgcgtgccgtgccggaggcgcggcggcgtgcggttcacggtggccgggcgggactacttcgagctggtgctggtgacgaacgtggcggcggctgggtcggtgaggtcgatggaggtgaggggcagccgccgtggcgccgggtggatggccatgtcgcgcaactggggcgccaactggcagtcgctggcgtacctcgacgggcagggcctctcgttccgggtcaccgccaccgacggccagaccatcgtcttcgccggcgtcgtgccgccgtcgtggaggttcggccagacgttcgcgagcacccagcagttcatgtagctagtctcactctcgctcgggttccctttggttggcacttggcagtggcgttgtttgctatactttgctctcttctgttggtgtttaattagcagcccgccaacgatttgtgctatgtaatcgtgttaatttgacagtttttgtggtgtattgagaagacttgtccacgtatcaatctagcacaaattgctttgcaaagtaacc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0718100, RefSeq:Os06g0718100