Os06g0727700

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Revision as of 09:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0727700| Description = Protein of unknown function DUF707 family protein| Version = NM_001065173.1 GI:115470077 GeneID:4342127| Length = 61...")
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Gene Name

Os06g0727700

Description

Protein of unknown function DUF707 family protein

Version

NM_001065173.1 GI:115470077 GeneID:4342127

Length

6168 bp

Definition

Oryza sativa Japonica Group Os06g0727700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:31844321..31850488

Sequence Coding Region

31844490..31844582,31844778..31844921,31845173..31845298,31846861..31846944,31847025..31847140
,31847255..31847551,31847679..31847733,31847875..31847949,31848055..31848087
,31849854..31849961

Expression

GEO Profiles:Os06g0727700

Genome Context

<gbrowseImage1> name=NC_008399:31844321..31850488 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:31844321..31850488 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaagcagcaagttcgatctttacggcattatccgcggccgtgttcggcttcttcattggtatttcttttcctgtagaaatcacaccaaagcttcagtattgtgcctttctcccttgcgacggtacaaacacgaactccagctccagcagtgacagcaacaacaacatgctcaacttctgggcaccatccgtcagaaacagcactagtgccccgtcgaatgccactatttcagggaacggtacaacgacagcagcagctgcagtggcgaaaaaaccgcaaggagcggagaggctgcctccgggtattgttgtccgggactctgatcttcatctacaccgcctctggggccacccaacatcggacgttgcgagtggcaagcagtaccttgtgacgctgacggtggggtacactgagaaagacaacatcaatgcaactgttcacaagttatcggacaagtttgacatagtgctgttccattacgacggtcggacgactgaatgggaggagttcgagtggtccaagaaggttgttcatgtcagcgccaagaagcagaccaaatggtggtttgcgaagagattcatgcatccgagcatcgtggcgccatacgagtacatattcctgtgggatgaggatctgggagtggacaacttcagtgcggaggagtacatcagcatcgccaggaagcatggcctggggatctcgcagccggggctcgacgccaccaaagggaagagatcacgctacacggccaccgccaggaggcccgccggcgacatgcacacctccggcaggttcgtcgaggtcatggcgcccgtcttctccagagacgcctgggcatgcgtctggcacatgatcccgaatgatttggtccacggctggggtctcgaccacaatttctggagatgcgtcgacgagcctgaagagcatataggcgtcgtggatgcgcagttcgttgtccatcgcggtgtcccaacgctcataagccaaggcaacggagaacaagaagggagcagtgccaaggtgagatcccggcagtttgacgagatgcgcaccttctaccgcagaatcgccgacgccgaaaaggctcaagccgacgccacggcagctgcagcagatcatcatcgctga</cdnaseq>

Protein Sequence

<aaseq>MKAASSIFTALSAAVFGFFIGISFPVEITPKLQYCAFLPCDGTN TNSSSSSDSNNNMLNFWAPSVRNSTSAPSNATISGNGTTTAAAAVAKKPQGAERLPPG IVVRDSDLHLHRLWGHPTSDVASGKQYLVTLTVGYTEKDNINATVHKLSDKFDIVLFH YDGRTTEWEEFEWSKKVVHVSAKKQTKWWFAKRFMHPSIVAPYEYIFLWDEDLGVDNF SAEEYISIARKHGLGISQPGLDATKGKRSRYTATARRPAGDMHTSGRFVEVMAPVFSR DAWACVWHMIPNDLVHGWGLDHNFWRCVDEPEEHIGVVDAQFVVHRGVPTLISQGNGE QEGSSAKVRSRQFDEMRTFYRRIADAEKAQADATAAAADHHR</aaseq>

Gene Sequence

<dnaseqindica>170..262#458..601#853..978#2541..2624#2705..2820#2935..3231#3359..3413#3555..3629#3735..3767#5534..5641#cagctataggctatagctagtcgatccaggagcaaagcacagcgacaatcaagctagctaagcatgctaatgatcgatcgagcttctgctagcagctagctggtgcgatcgatcgaacagcttaattgttggttgataagtttattagcttagcaaaagcaggtcgaagatgaaagcagcaagttcgatctttacggcattatccgcggccgtgttcggcttcttcattggtatttcttttcctgtagaaatcacaccaaaggtgagtaaatatattccatacatacatgtacagtatatatgtctaaacctactcgatggatcaatctttatatatatatctaaacaaatgaatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatttgtgcatgcagcttcagtattgtgcctttctcccttgcgacggtacaaacacgaactccagctccagcagtgacagcaacaacaacatgctcaacttctgggcaccatccgtcagaaacagcactagtgccccgtcgaatgccactatttcaggggtacactactactactactactactactactactactactactactactttgtgttcgatcgtgatatatacactagctagctacctcatatcatacggatttttacctgcagctggatcgtacctagcggttcttctttctcggacagtacactagtaaaggcagtagtttgtctgaatttacatatatatgaacgatcgatctgtctcgtaaccaatttacatatcgatcgatcgggctgtgcttgcagaacggtacaacgacagcagcagctgcagtggcgaaaaaaccgcaaggagcggagaggctgcctccgggtattgttgtccgggactctgatcttcatctacaccgcctctggggccacccaacatcggtacatgctacagctatatatatgcattatgtctgtctatcttctcatcgatcacttggtgcacaggccgcttgtatctatactactttagaaggtagtagtactttagagctggtggtgacagtgaatctgccaccaccagctctatcacctacatgtggggactcttcctgtcttgtccgtgaaacttgcatgctcactaaattcaaacgccttctaaaagaaacatgtctattgtcgaagcaaaataatgtcaatattctttggtgaggtaagataagtatgtagggaattaatccacatagttaagggattagaaattgcatgtatgtagatttttcaaggatgagtacactactacacaaatgattttttctcaacaagcaccttataggttgtaggcgggtcataaatatccgcgtctgcaaaaatcaatccccattttcgcatacagcttcttaagaggtccatatgtaaaaattaattttcgcaagctggtctctagaagaaccacacgcgaaaatacttatgtttttgcatgcgggcctgttaagtaatccgcatgaaagaatcaccccctccctcttttccaactcttcttttattttattctccactccattgtctttctctctcccactcctcttcactccggtctactcctcatgcgggtgcgccatccacacgcaaaagtagcgaatttcgcagacacctactccctccgtcccaaaaaaagacaaaccctggtttccgtgtccaacgtttgaccgtccgtcttatttgaaaaaattataaaaaaattaaaaagataagtcatgcataaagtattaaccatgttttatcatctaacaacaatgaaaatactaattataaaaaaattcatataagacggacagtcaaacgttggcacggaaacccaggatttgtcttttttttggacggagagagtaggtgcgtgcgagtcacccaactgcctacgaaaatcagattcgaccgtatggaaaaatgctttttgtagtagtggtatgcgcacgaagattattattattattagccattgtatagaacataagagcagccacatccaaagatcaagaataaaacaaccacatcacagatcaagaacaagctagtcacattgattcaattattcgtcttacaccatcaacaacagaacaaccaaccacatcacataccgatatcgaaatccttctacattcaacacacgaagaaagaggccaccgctgcctcgcctatggacttatgggcctcaccgtcatcgtccaccgtcgctagctgtgagtcgaggatgagagaagagggtggagatcgatggagtacttgcgatgttgacttaaggcctggtttctcttattaattagtcgtactagctagctaggcacgtggatgagtggaaaatcgttcctatcaataccggtttttggctaaaccggcactaataaagcgtatatataattgggccattctattgtagtagtagtgtatgattttattcttaactgatcatatatggagtatgtatgtacgtaatgtgtatacaggacgttgcgagtggcaagcagtaccttgtgacgctgacggtggggtacactgagaaagacaacatcaatgcaactgttcacaaggtcgctcgctcattaacttattactcgatcctatatatttgcagacttaatgaataataataggaatataatacatgcagttatcggacaagtttgacatagtgctgttccattacgacggtcggacgactgaatgggaggagttcgagtggtccaagaaggttgttcatgtcagcgccaagaagcagaccaaatggtaattaactacctactccaattaatccaactgttaattaattagctgaattgattgatcatcatatcgatcagtatatagtaaatgcatatgaattgaattgaaattgaataggtggtttgcgaagagattcatgcatccgagcatcgtggcgccatacgagtacatattcctgtgggatgaggatctgggagtggacaacttcagtgcggaggagtacatcagcatcgccaggaagcatggcctggggatctcgcagccggggctcgacgccaccaaagggaagagatcacgctacacggccaccgccaggaggcccgccggcgacatgcacacctccggcaggttcgtcgaggtcatggcgcccgtcttctccagagacgcctgggcatgcgtctggcacatgatcccggcaagtgtcctatccatcgcattcattatattaattctgacttacagtagtattggttagtatttcagtcagacataaacgaactaacgatcaatataatgaatctgcatgcattgtatgtacgcagaatgatttggtccacggctggggtctcgaccacaatttctggagatgcgtcgacgtaagttcatactgctagcttattagctgcaaacactggcgatctctacattcagatcgatgtacactgaaataatgtactgcttaatttaaaaaaatcgatcgaatcatgcattcattcatatatatattggcaaagcaggagcctgaagagcatataggcgtcgtggatgcgcagttcgttgtccatcgcggtgtcccaacgctcataagccaagtaactaaaaacaatatctattatcccataatgcaactagctttggttaaattatacactactcctaccatatttaattgtgtttttctctccacatatatacagggcaacggagaacaagaagggagcagtgccaaggtaagtcgtacaattaactgtattattctaagtagctactctcttaactcctcaaatactatttgatacggcatgcacactgtttttaagtttaaacttcaatcttaccttcttttaagaatatatgaatattttaaaatatgttatattatcgaagtgtgtatatatagcatcataaatataatcgtacaacttttattcatagtatatattactctttccgtattttaatgtatgacgccgttgacttttcgaccaacgtttgaccattcgttttattcaaaatttttatgcaaatatgaaaatatttatggcatgcttaaagaacattcgataacgaatcaagtcataataaaataaatgataattacataaattttttgaataagacaaatggtcaaacgttggacaaaaagtcaacggcgtcatacattaaaatatggagatagtataatctatactcttaaaatggtaaggatggtggtgtctattttgaccgtacatctccttgatacctgggacccaaaatgttggtgaagggatgacgctccagtctggatcaatcggcctctctctctctctgtgcgcacgcgcttcctccgctactggctgccgctactaggggtggacagggagctcgtggctcgttagctcgctcggctcgtgacaagctcggctcggctcagctcagctcgtttgatttttctaatgagccgagctagaagtttagctcgttagagataacatgaggtacttgagaaggtaccatgaggtaccattttttctattgtaaatttggtacctcatgagatacttgaggaggtaccataaggtaccattttttctattgtaaatttggtacctaggtaccatgaggtacaaaattttacactaaatttttggtacctcgtggtacatcctcaaggatcgtagaattgctcctctctctctctctctctctctctctctctctctctctctctctctctctctccgcgcgcgcttcctccgctactggctaccgctaccaagccttcatatacttctcacgtagcctactctctctagcccccttcctcaacccgtgcacctactccctccgtcccaaaacaattcaacctaggatgggatgtgaccctttctacgacaacgaatctagataagcctttattcagcttcgttatcctaagatgggttattttgagatggagggagtatttcagatatgcaagaaaaaaatccaaaaaaaaagttgggtttaggtgccacctactgagcttattgggtctatgaggcaaatttggtctctttggctaggaataagttcactataggtccctcaatctatcgccgagtttgcaattcatccctgaaccaaataccagatataatgggtccctaaacttacaaaatcgaatcactcgaggtcctaagcaatattatattcggtttgttttttttttcttaagggctcattagatatgccatcttttacaagagggcccaggtaaattaaaaaaaaattgagggttatgtaaccaatcaattcaatgtatttacaataaggaaaattatataaaatttactatagttggattaaatatgtgttcaattgttttgataagctaggaatttggcttttgactagttattaaaaagtaatttgtgtactagttattaaatatattaatgtataaaaaaacttgacgtaatatatatattcctgtagatgttaattaatacatatctggtgtgtaaatacgtaggtgagatcccggcagtttgacgagatgcgcaccttctaccgcagaatcgccgacgccgaaaaggctcaagccgacgccacggcagctgcagcagatcatcatcgctgagttattaattaacaattaacgtcagcctagacctctacatcatatatatcgtctcggatgatcaaattaaccagatttagttacaaagaggcaggttctttggggggcaaaattaactaggctcacgagagcacatatgaactagtttagtatacatggcatggttaatttgaaagttaaaaaaacatttgacagccaaagagataatgtgagcactttaattgagaaatcgaatatgggatcatggggttaaaactgcaccctacagtaccaaatatacatctcaagccaaatagtactaaaaacgacttcaattgatttgcattgattgcctcaaaagaaatttgtgttgattcaattcttcctctagctaccttctctttttctcctcttttaatttgactcattgcgtacgtgttgactttatgttgattaagctaggtctcgtttaatttctgtaataaatcagttgaacttctggtgtagtaatatatagtatctacacaatattggtcggttcataatat</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0727700, RefSeq:Os06g0727700