Os06g0729800

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Revision as of 09:36, 24 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os06g0729800| Description = contains InterPro domain(s): IPR002627, IPR011593| Version = NM_001065186.2 GI:297606556 GeneID:4342142| Length = 15...")
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Gene Name

Os06g0729800

Description

contains InterPro domain(s): IPR002627, IPR011593

Version

NM_001065186.2 GI:297606556 GeneID:4342142

Length

1539 bp

Definition

Oryza sativa Japonica Group Os06g0729800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:31977871..31979409

Sequence Coding Region

31977977..31979230

Expression

GEO Profiles:Os06g0729800

Genome Context

<gbrowseImage1> name=NC_008399:31977871..31979409 source=RiceChromosome06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008399:31977871..31979409 source=RiceChromosome06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagtatggatgcaggcgccccgccgtgtggaagagaagttggtccccggctgccgccgccgccaccaagaacaaggtcatcgtcatctcaggccccaccggcgccggcaagaccaggctcgccttggacctcgccaagaggctctccggggagatcatcagcgccgactccgtccaggtctaccggggcctcgacgtcggctccgccaagccctcctcttccgacagggccgccgtgccgcaccacctcatcgacatcctccacgcctccgacgactactccgccggggacttcttccacgacgcccgcgcagcaaccgaccacctcctcgcccgagcccgcgtccccattgtcgccggagggactggcctctacctccgctggtacatctatggcaagcccagtgtcccgcagtcttccatggacgtcacctccgccgtctggtccgagctctcccgcttccgggacaccggccgctgggaagaagccgtcgacctggttgccaacgccggcgaccccaaagctcgggacctgtcagtcaacaactggtcaaggttaaggagaagccttgagatcatcaggtcttcaggctcacctccctctgccttctccttgccctacaatgcttacaatctcaatcaccaccgtcgtctcagtctcaccaaccaagccgatcaacccacggagctggagctggactacgacttcctctgcatcttcctcgcgtgcccacgcgttgagctctacagatcaatcgatctgaggtgcgaagagatgctggccgacacaggtggcctactctctgaagcctcctggctcctcgacatcggcttgagtcctggcatgaactcggctacctgcgcaatcggctacaggcaagccatggagtacttgcttcagtgtaggcacaacggaggcagcagctccccacaagagttcttggagttcctgaccaagtttcagactgcctccaggaacttctcaaagaggcagatgacatggttccgcaacgagaagatttaccagtgggttgatgcctcgcagcctttcgacgccattgcgcagtttatctgtgatgcttaccatgaccgtgctgcaaggctggttcctgattcactggaaatgaagagggagagttgcaggcacgagagccgtgatctcaagacctaccgttctgagaacagggtgttccgtggggatgatgattgttgccacgttttggattggatcacaaggacacagaggaagtga</cdnaseq>

Protein Sequence

<aaseq>MQYGCRRPAVWKRSWSPAAAAATKNKVIVISGPTGAGKTRLALD LAKRLSGEIISADSVQVYRGLDVGSAKPSSSDRAAVPHHLIDILHASDDYSAGDFFHD ARAATDHLLARARVPIVAGGTGLYLRWYIYGKPSVPQSSMDVTSAVWSELSRFRDTGR WEEAVDLVANAGDPKARDLSVNNWSRLRRSLEIIRSSGSPPSAFSLPYNAYNLNHHRR LSLTNQADQPTELELDYDFLCIFLACPRVELYRSIDLRCEEMLADTGGLLSEASWLLD IGLSPGMNSATCAIGYRQAMEYLLQCRHNGGSSSPQEFLEFLTKFQTASRNFSKRQMT WFRNEKIYQWVDASQPFDAIAQFICDAYHDRAARLVPDSLEMKRESCRHESRDLKTYR SENRVFRGDDDCCHVLDWITRTQRK</aaseq>

Gene Sequence

<dnaseqindica>107..1360#tcttcccttcccttccacacgaagccgccgcccgccggccggccgcccagaaccagaaagctcctcctcctcctcctccgcgcgccatcagatctcccagtgcggtatgcagtatggatgcaggcgccccgccgtgtggaagagaagttggtccccggctgccgccgccgccaccaagaacaaggtcatcgtcatctcaggccccaccggcgccggcaagaccaggctcgccttggacctcgccaagaggctctccggggagatcatcagcgccgactccgtccaggtctaccggggcctcgacgtcggctccgccaagccctcctcttccgacagggccgccgtgccgcaccacctcatcgacatcctccacgcctccgacgactactccgccggggacttcttccacgacgcccgcgcagcaaccgaccacctcctcgcccgagcccgcgtccccattgtcgccggagggactggcctctacctccgctggtacatctatggcaagcccagtgtcccgcagtcttccatggacgtcacctccgccgtctggtccgagctctcccgcttccgggacaccggccgctgggaagaagccgtcgacctggttgccaacgccggcgaccccaaagctcgggacctgtcagtcaacaactggtcaaggttaaggagaagccttgagatcatcaggtcttcaggctcacctccctctgccttctccttgccctacaatgcttacaatctcaatcaccaccgtcgtctcagtctcaccaaccaagccgatcaacccacggagctggagctggactacgacttcctctgcatcttcctcgcgtgcccacgcgttgagctctacagatcaatcgatctgaggtgcgaagagatgctggccgacacaggtggcctactctctgaagcctcctggctcctcgacatcggcttgagtcctggcatgaactcggctacctgcgcaatcggctacaggcaagccatggagtacttgcttcagtgtaggcacaacggaggcagcagctccccacaagagttcttggagttcctgaccaagtttcagactgcctccaggaacttctcaaagaggcagatgacatggttccgcaacgagaagatttaccagtgggttgatgcctcgcagcctttcgacgccattgcgcagtttatctgtgatgcttaccatgaccgtgctgcaaggctggttcctgattcactggaaatgaagagggagagttgcaggcacgagagccgtgatctcaagacctaccgttctgagaacagggtgttccgtggggatgatgattgttgccacgttttggattggatcacaaggacacagaggaagtgacctctactgctctctcttgttatctcttttttttcttccccctcttttcccgccaggaaactatcctgctgctgtgtttggagatgttacaataggaaatttcagcctttttttgtcagaaaaatacagatacttgttttgcaaatgttataccaaaagtgttttcaactttggaattc</dnaseqindica>

External Link(s)

NCBI Gene:Os06g0729800, RefSeq:Os06g0729800